RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RSBN1LQ6PCB5 846 aaPredicted RBP8.83□□□□□ -1
VPS50-218ENST00000485994 LDHAL6AQ6ZMR3 332 aa8.83□□□□□ -1
VPS50-218ENST00000485994 CDC37L1Q7L3B6 337 aa8.83□□□□□ -1
VPS50-218ENST00000485994 USP17L1Q7RTZ2 530 aa8.83□□□□□ -1
VPS50-218ENST00000485994 HDAC5Q9UQL6 1122 aa8.83□□□□□ -1
VPS50-218ENST00000485994 WTIPA6NIX2 430 aaPredicted RBP8.82□□□□□ -1
VPS50-218ENST00000485994 RASSF10A6NK89 507 aa8.82□□□□□ -1
VPS50-218ENST00000485994 UBE4AQ14139 1066 aa8.82□□□□□ -1
VPS50-218ENST00000485994 MICALL2Q8IY33 904 aa8.82□□□□□ -1
VPS50-218ENST00000485994 SUCLG2Q96I99 432 aa8.82□□□□□ -1
VPS50-218ENST00000485994 HHIPL1Q96JK4 782 aa8.82□□□□□ -1
VPS50-218ENST00000485994 GPR101Q96P66 508 aaPredicted RBP8.82□□□□□ -1
VPS50-218ENST00000485994 API5Q9BZZ5 524 aaKnown RBP8.82□□□□□ -1
VPS50-218ENST00000485994 SMC4Q9NTJ3 1288 aa8.82□□□□□ -1
VPS50-218ENST00000485994 NOB1Q9ULX3 412 aaKnown RBP8.82□□□□□ -1
VPS50-218ENST00000485994 RIPOR2Q9Y4F9 1068 aa8.82□□□□□ -1
VPS50-218ENST00000485994 MYO3BQ8WXR4 1341 aa8.81□□□□□ -1
VPS50-218ENST00000485994 IPO8O15397 1037 aaKnown RBP8.81□□□□□ -1
VPS50-218ENST00000485994 IL1R1P14778 569 aa8.81□□□□□ -1
VPS50-218ENST00000485994 FKBP1AP62942 108 aaKnown RBP8.81□□□□□ -1
VPS50-218ENST00000485994 DEFB115Q30KQ5 88 aa8.81□□□□□ -1
VPS50-218ENST00000485994 DACT2Q5SW24 774 aa8.81□□□□□ -1
VPS50-218ENST00000485994 CST9Q5W186 159 aa8.81□□□□□ -1
VPS50-218ENST00000485994 TXNRD3Q86VQ6 643 aa8.81□□□□□ -1
VPS50-218ENST00000485994 CD209Q9NNX6 404 aa8.81□□□□□ -1
VPS50-218ENST00000485994 FBXO3Q9UK99 471 aa8.81□□□□□ -1
VPS50-218ENST00000485994 CNTNAP1P78357 1384 aa8.81□□□□□ -1
VPS50-218ENST00000485994 KIF16BQ96L93 1317 aa8.8□□□□□ -1
VPS50-218ENST00000485994 USP17L8P0C7I0 530 aa8.8□□□□□ -1
VPS50-218ENST00000485994 INTS3Q68E01 1043 aaKnown RBP8.8□□□□□ -1
VPS50-218ENST00000485994 TTLL5Q6EMB2 1281 aa8.8□□□□□ -1
VPS50-218ENST00000485994 SAMD7Q7Z3H4 446 aa8.8□□□□□ -1
VPS50-218ENST00000485994 ANKRD44Q8N8A2 993 aa8.8□□□□□ -1
VPS50-218ENST00000485994 TRPM4Q8TD43 1214 aa8.8□□□□□ -1
VPS50-218ENST00000485994 BICC1Q9H694 974 aaKnown RBP8.8□□□□□ -1
VPS50-218ENST00000485994 SPEF2Q9C093 1822 aa8.8□□□□□ -1
VPS50-218ENST00000485994 MROH5Q6ZUA9 1318 aa8.8□□□□□ -1
VPS50-218ENST00000485994 SHTN1A0MZ66 631 aa8.79□□□□□ -1
VPS50-218ENST00000485994 TAF5LO75529 589 aa8.79□□□□□ -1
VPS50-218ENST00000485994 SASH1O94885 1247 aa8.79□□□□□ -1
VPS50-218ENST00000485994 KCNJ4P48050 445 aa8.79□□□□□ -1
VPS50-218ENST00000485994 TAF7LQ5H9L4 462 aa8.79□□□□□ -1
VPS50-218ENST00000485994 OGFOD1Q8N543 542 aa8.79□□□□□ -1
VPS50-218ENST00000485994 DCPSQ96C86 337 aaKnown RBP8.79□□□□□ -1
VPS50-218ENST00000485994 ZNF594Q96JF6 807 aaPredicted RBP8.79□□□□□ -1
VPS50-218ENST00000485994 MYOZ2Q9NPC6 264 aa8.79□□□□□ -1
VPS50-218ENST00000485994 CNNM1Q9NRU3 951 aa8.79□□□□□ -1
VPS50-218ENST00000485994 BOLA1Q9Y3E2 137 aa8.79□□□□□ -1
VPS50-218ENST00000485994 CHMP3Q9Y3E7 222 aa8.79□□□□□ -1
VPS50-218ENST00000485994 TLL2Q9Y6L7 1015 aa8.79□□□□□ -1
VPS50-218ENST00000485994 PITPNM2Q9BZ72 1349 aa8.79□□□□□ -1
VPS50-218ENST00000485994 PDE8BO95263 885 aa8.78□□□□□ -1
VPS50-218ENST00000485994 EGFRP00533 1210 aa8.78□□□□□ -1
VPS50-218ENST00000485994 HOXB1P14653 301 aaPredicted RBP8.78□□□□□ -1
VPS50-218ENST00000485994 RFX5P48382 616 aaPredicted RBP8.78□□□□□ -1
VPS50-218ENST00000485994 VEGFBP49765 207 aa8.78□□□□□ -1
VPS50-218ENST00000485994 GSE1Q14687 1217 aa8.78□□□□□ -1
VPS50-218ENST00000485994 KIF4BQ2VIQ3 1234 aa8.78□□□□□ -1
VPS50-218ENST00000485994 TBC1D10BQ4KMP7 808 aaPredicted RBP8.78□□□□□ -1
VPS50-218ENST00000485994 ZNF804AQ7Z570 1209 aa8.78□□□□□ -1
VPS50-218ENST00000485994 FBXO33Q7Z6M2 555 aa8.78□□□□□ -1
VPS50-218ENST00000485994 SAPCD2Q86UD0 394 aa8.78□□□□□ -1
VPS50-218ENST00000485994 MTMR14Q8NCE2 650 aa8.78□□□□□ -1
VPS50-218ENST00000485994 HELBQ8NG08 1087 aaPredicted RBP8.78□□□□□ -1
VPS50-218ENST00000485994 TDRD7Q8NHU6 1098 aaKnown RBP8.78□□□□□ -1
VPS50-218ENST00000485994 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
VPS50-218ENST00000485994 FAM84BQ96KN1 310 aaPredicted RBP8.78□□□□□ -1
VPS50-218ENST00000485994 PUS3Q9BZE2 481 aaKnown RBP8.78□□□□□ -1
VPS50-218ENST00000485994 FAM205AQ6ZU69 1335 aa8.78□□□□□ -1
VPS50-218ENST00000485994 ZNF646O15015 1829 aaPredicted RBP8.77□□□□□ -1
VPS50-218ENST00000485994 SNAP23O00161 211 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 TRAF5O00463 557 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 GNAI3P08754 354 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 UBTFL1P0CB47 393 aaPredicted RBP8.77□□□□□ -1.01
VPS50-218ENST00000485994 MAP2K2P36507 400 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 ECE1P42892 770 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 GTF2IP78347 998 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 HNRNPUQ00839 825 aaKnown RBP eCLIP8.77□□□□□ -1.01
VPS50-218ENST00000485994 PTPN12Q05209 780 aaKnown RBP8.77□□□□□ -1.01
VPS50-218ENST00000485994 SCARF1Q14162 830 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 ATF7IPQ6VMQ6 1270 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 KRT26Q7Z3Y9 468 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 USP48Q86UV5 1035 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 VGLL2Q8N8G2 317 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 ZBED3Q96IU2 234 aaPredicted RBP8.77□□□□□ -1.01
VPS50-218ENST00000485994 MRIQ9BWK5 157 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 GLIS2Q9BZE0 524 aaPredicted RBP8.77□□□□□ -1.01
VPS50-218ENST00000485994 MKRN1Q9UHC7 482 aaKnown RBP8.77□□□□□ -1.01
VPS50-218ENST00000485994 HDAC9Q9UKV0 1011 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 ZBED9Q6R2W3 1325 aa8.77□□□□□ -1.01
VPS50-218ENST00000485994 WDR33Q9C0J8 1336 aaKnown RBP8.77□□□□□ -1.01
VPS50-218ENST00000485994 A0A1B0GUL6 1792 aa8.76□□□□□ -1.01
VPS50-218ENST00000485994 EYA2O00167 538 aa8.76□□□□□ -1.01
VPS50-218ENST00000485994 WNT10BO00744 389 aa8.76□□□□□ -1.01
VPS50-218ENST00000485994 CIAO1O76071 339 aa8.76□□□□□ -1.01
VPS50-218ENST00000485994 CELF2O95319 508 aaKnown RBP8.76□□□□□ -1.01
VPS50-218ENST00000485994 FGFR2P21802 821 aa8.76□□□□□ -1.01
VPS50-218ENST00000485994 KLRK1P26718 216 aa8.76□□□□□ -1.01
VPS50-218ENST00000485994 HIBADHP31937 336 aaKnown RBP8.76□□□□□ -1.01
VPS50-218ENST00000485994 FKBP1BP68106 108 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms