RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 JDP2Q8WYK2 163 aa21.42■■□□□ 1.02
CHMP3-207ENST00000485465 SNRKQ9NRH2 765 aa21.42■■□□□ 1.02
CHMP3-207ENST00000485465 PDS5AQ29RF7 1337 aaKnown RBP21.41■■□□□ 1.02
CHMP3-207ENST00000485465 ZAP70P43403 619 aa21.41■■□□□ 1.02
CHMP3-207ENST00000485465 PI16Q6UXB8 463 aa21.41■■□□□ 1.02
CHMP3-207ENST00000485465 DNAJC2Q99543 621 aaKnown RBP21.41■■□□□ 1.02
CHMP3-207ENST00000485465 ZNRF3Q9ULT6 936 aa21.41■■□□□ 1.02
CHMP3-207ENST00000485465 COL1A1P02452 1464 aaPredicted RBP21.4■■□□□ 1.02
CHMP3-207ENST00000485465 YDJCA8MPS7 323 aa21.4■■□□□ 1.02
CHMP3-207ENST00000485465 CHAF1AQ13111 956 aaPredicted RBP21.4■■□□□ 1.02
CHMP3-207ENST00000485465 NDUFB9Q9Y6M9 179 aa21.4■■□□□ 1.02
CHMP3-207ENST00000485465 FAM205AQ6ZU69 1335 aa21.39■■□□□ 1.01
CHMP3-207ENST00000485465 MAP4K4O95819 1239 aaPredicted RBP21.39■■□□□ 1.01
CHMP3-207ENST00000485465 GSPT1P15170 499 aaKnown RBP21.39■■□□□ 1.01
CHMP3-207ENST00000485465 KCNQ5Q9NR82 932 aa21.39■■□□□ 1.01
CHMP3-207ENST00000485465 CYP2E1P05181 493 aaPredicted RBP21.38■■□□□ 1.01
CHMP3-207ENST00000485465 GTF2IP78347 998 aa21.38■■□□□ 1.01
CHMP3-207ENST00000485465 PAG1Q9NWQ8 432 aa21.38■■□□□ 1.01
CHMP3-207ENST00000485465 JAG2Q9Y219 1238 aa21.38■■□□□ 1.01
CHMP3-207ENST00000485465 DCAF8L1A6NGE4 600 aa21.37■■□□□ 1.01
CHMP3-207ENST00000485465 GOLIM4O00461 696 aa21.37■■□□□ 1.01
CHMP3-207ENST00000485465 TTLL5Q6EMB2 1281 aa21.37■■□□□ 1.01
CHMP3-207ENST00000485465 WDR66Q8TBY9 1149 aa21.37■■□□□ 1.01
CHMP3-207ENST00000485465 EDC3Q96F86 508 aaKnown RBP21.37■■□□□ 1.01
CHMP3-207ENST00000485465 AKAP11Q9UKA4 1901 aa21.37■■□□□ 1.01
CHMP3-207ENST00000485465 USP17L3A6NCW0 530 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 USP17L4A6NCW7 530 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 TRIM6-TRIM34B2RNG4 842 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 STRIP1Q5VSL9 837 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 C9orf131Q5VYM1 1079 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 USP17L1Q7RTZ2 530 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 FBXW7Q969H0 707 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 ANTXR1Q9H6X2 564 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 RNF181Q9P0P0 153 aa21.36■■□□□ 1.01
CHMP3-207ENST00000485465 SALL1Q9NSC2 1324 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 FZD9O00144 591 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 RAD17O75943 681 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 TTF1Q15361 905 aaPredicted RBP21.35■■□□□ 1.01
CHMP3-207ENST00000485465 BMP2KLQ5H9B9 411 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 TBC1D9Q6ZT07 1266 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 EVI5LQ96CN4 794 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 PIH1D3Q9NQM4 214 aaKnown RBP21.35■■□□□ 1.01
CHMP3-207ENST00000485465 CHD4Q14839 1912 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 SBF1O95248 1867 aa21.35■■□□□ 1.01
CHMP3-207ENST00000485465 SDSP20132 328 aa21.34■■□□□ 1.01
CHMP3-207ENST00000485465 CXCL9Q07325 125 aa21.34■■□□□ 1.01
CHMP3-207ENST00000485465 DACT2Q5SW24 774 aa21.34■■□□□ 1.01
CHMP3-207ENST00000485465 CNTROBQ8N137 903 aa21.34■■□□□ 1.01
CHMP3-207ENST00000485465 RILPL2Q969X0 211 aa21.34■■□□□ 1.01
CHMP3-207ENST00000485465 CCDC88AQ3V6T2 1871 aa21.33■■□□□ 1.01
CHMP3-207ENST00000485465 EIF6P56537 245 aaKnown RBP21.33■■□□□ 1.01
CHMP3-207ENST00000485465 FKBP1AP62942 108 aaKnown RBP21.33■■□□□ 1.01
CHMP3-207ENST00000485465 MFSD14BQ5SR56 506 aa21.33■■□□□ 1.01
CHMP3-207ENST00000485465 ZGPATQ8N5A5 531 aaKnown RBP21.33■■□□□ 1.01
CHMP3-207ENST00000485465 ABCF2Q9UG63 623 aa21.33■■□□□ 1.01
CHMP3-207ENST00000485465 MYH13Q9UKX3 1938 aa21.33■■□□□ 1
CHMP3-207ENST00000485465 SCN9AQ15858 1988 aa21.32■■□□□ 1
CHMP3-207ENST00000485465 PSMD14O00487 310 aa21.32■■□□□ 1
CHMP3-207ENST00000485465 VIL1P09327 827 aaKnown RBP21.32■■□□□ 1
CHMP3-207ENST00000485465 TNIP1Q15025 636 aa21.32■■□□□ 1
CHMP3-207ENST00000485465 SPTY2D1Q68D10 685 aaPredicted RBP21.32■■□□□ 1
CHMP3-207ENST00000485465 CIAPIN1Q6FI81 312 aa21.32■■□□□ 1
CHMP3-207ENST00000485465 KBTBD3Q8NAB2 608 aa21.32■■□□□ 1
CHMP3-207ENST00000485465 MXD3Q9BW11 206 aa21.32■■□□□ 1
CHMP3-207ENST00000485465 DICER1Q9UPY3 1922 aaKnown RBP21.31■■□□□ 1
CHMP3-207ENST00000485465 CERS5Q8N5B7 392 aa21.31■■□□□ 1
CHMP3-207ENST00000485465 LRP2BPQ9P2M1 347 aa21.31■■□□□ 1
CHMP3-207ENST00000485465 IDH1O75874 414 aaKnown RBP21.3■■□□□ 1
CHMP3-207ENST00000485465 RSBN1LQ6PCB5 846 aaPredicted RBP21.3■■□□□ 1
CHMP3-207ENST00000485465 ERICH6Q7L0X2 663 aa21.3■■□□□ 1
CHMP3-207ENST00000485465 FSD1Q9BTV5 496 aa21.3■■□□□ 1
CHMP3-207ENST00000485465 SUGT1Q9Y2Z0 365 aa21.3■■□□□ 1
CHMP3-207ENST00000485465 ZNF541Q9H0D2 1346 aa21.29■■□□□ 1
CHMP3-207ENST00000485465 LDHBP07195 334 aaKnown RBP21.29■■□□□ 1
CHMP3-207ENST00000485465 PRDX5P30044 214 aa21.29■■□□□ 1
CHMP3-207ENST00000485465 MAP3K12Q12852 859 aa21.29■■□□□ 1
CHMP3-207ENST00000485465 GRIK5Q16478 980 aa21.29■■□□□ 1
CHMP3-207ENST00000485465 RAI14Q9P0K7 980 aa21.29■■□□□ 1
CHMP3-207ENST00000485465 ZNF646O15015 1829 aaPredicted RBP21.29■■□□□ 1
CHMP3-207ENST00000485465 PSME4Q14997 1843 aa21.28■■□□□ 1
CHMP3-207ENST00000485465 IGSF3O75054 1194 aa21.28■■□□□ 1
CHMP3-207ENST00000485465 TICAM2Q86XR7 235 aa21.28■■□□□ 1
CHMP3-207ENST00000485465 DDX24Q9GZR7 859 aaKnown RBP eCLIP21.28■■□□□ 1
CHMP3-207ENST00000485465 MYO3BQ8WXR4 1341 aa21.28■■□□□ 1
CHMP3-207ENST00000485465 LRRFIP1Q32MZ4 808 aaKnown RBP21.27■■□□□ 1
CHMP3-207ENST00000485465 GMLQ99445 158 aa21.27■■□□□ 1
CHMP3-207ENST00000485465 ZC3H4Q9UPT8 1303 aaKnown RBP21.27■□□□□ 0.99
CHMP3-207ENST00000485465 TIAM2Q8IVF5 1701 aa21.26■□□□□ 0.99
CHMP3-207ENST00000485465 MECOMQ03112 1051 aa21.26■□□□□ 0.99
CHMP3-207ENST00000485465 SLC9C2Q5TAH2 1124 aa21.26■□□□□ 0.99
CHMP3-207ENST00000485465 ZSCAN25Q6NSZ9 544 aa21.26■□□□□ 0.99
CHMP3-207ENST00000485465 AGBL3Q8NEM8 1001 aa21.26■□□□□ 0.99
CHMP3-207ENST00000485465 NSUN4Q96CB9 384 aaKnown RBP21.26■□□□□ 0.99
CHMP3-207ENST00000485465 ZBTB12Q9Y330 459 aaPredicted RBP21.26■□□□□ 0.99
CHMP3-207ENST00000485465 GJA3Q9Y6H8 435 aa21.26■□□□□ 0.99
CHMP3-207ENST00000485465 RFX7Q2KHR2 1363 aa21.25■□□□□ 0.99
CHMP3-207ENST00000485465 F8W031 263 aaPredicted RBP21.25■□□□□ 0.99
CHMP3-207ENST00000485465 RNF113AO15541 343 aaKnown RBP21.25■□□□□ 0.99
CHMP3-207ENST00000485465 PDE6AP16499 860 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms