RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 TFCP2Q12800 502 aa20.14■□□□□ 0.81
DDR1-246ENST00000485023 TDRD7Q8NHU6 1098 aaKnown RBP20.14■□□□□ 0.81
DDR1-246ENST00000485023 SASH1O94885 1247 aa20.13■□□□□ 0.81
DDR1-246ENST00000485023 FBXO33Q7Z6M2 555 aa20.13■□□□□ 0.81
DDR1-246ENST00000485023 OGFOD1Q8N543 542 aa20.13■□□□□ 0.81
DDR1-246ENST00000485023 GGA3Q9NZ52 723 aa20.13■□□□□ 0.81
DDR1-246ENST00000485023 DDX19BQ9UMR2 479 aa20.13■□□□□ 0.81
DDR1-246ENST00000485023 ATP8B2P98198 1209 aa20.12■□□□□ 0.81
DDR1-246ENST00000485023 SCARF1Q14162 830 aa20.12■□□□□ 0.81
DDR1-246ENST00000485023 CEP85Q6P2H3 762 aa20.12■□□□□ 0.81
DDR1-246ENST00000485023 DLK2Q6UY11 383 aa20.12■□□□□ 0.81
DDR1-246ENST00000485023 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.12■□□□□ 0.81
DDR1-246ENST00000485023 ADM5C9JUS6 153 aa20.11■□□□□ 0.81
DDR1-246ENST00000485023 ADORA1P30542 326 aa20.11■□□□□ 0.81
DDR1-246ENST00000485023 G3BP1Q13283 466 aaKnown RBP eCLIP20.11■□□□□ 0.81
DDR1-246ENST00000485023 OS9Q13438 667 aaPredicted RBP20.11■□□□□ 0.81
DDR1-246ENST00000485023 POLA2Q14181 598 aa20.11■□□□□ 0.81
DDR1-246ENST00000485023 MFSD14BQ5SR56 506 aa20.11■□□□□ 0.81
DDR1-246ENST00000485023 USP48Q86UV5 1035 aa20.11■□□□□ 0.81
DDR1-246ENST00000485023 ZC3H15Q8WU90 426 aaKnown RBP20.11■□□□□ 0.81
DDR1-246ENST00000485023 PGAP2Q9UHJ9 254 aa20.11■□□□□ 0.81
DDR1-246ENST00000485023 HDAC9Q9UKV0 1011 aa20.11■□□□□ 0.81
DDR1-246ENST00000485023 FAM205AQ6ZU69 1335 aa20.1■□□□□ 0.81
DDR1-246ENST00000485023 NBPF9Q3BBW0 867 aa20.1■□□□□ 0.81
DDR1-246ENST00000485023 ANGEL2Q5VTE6 544 aaKnown RBP20.1■□□□□ 0.81
DDR1-246ENST00000485023 SSH3Q8TE77 659 aa20.1■□□□□ 0.81
DDR1-246ENST00000485023 DCPSQ96C86 337 aaKnown RBP20.1■□□□□ 0.81
DDR1-246ENST00000485023 ZNF408Q9H9D4 720 aa20.1■□□□□ 0.81
DDR1-246ENST00000485023 SCAF8Q9UPN6 1271 aaKnown RBP20.1■□□□□ 0.81
DDR1-246ENST00000485023 A0A1B0GUL7 405 aa20.09■□□□□ 0.81
DDR1-246ENST00000485023 SURF6O75683 361 aaKnown RBP20.09■□□□□ 0.81
DDR1-246ENST00000485023 TIMM10P62072 90 aa20.09■□□□□ 0.81
DDR1-246ENST00000485023 KRT26Q7Z3Y9 468 aa20.09■□□□□ 0.81
DDR1-246ENST00000485023 PCDHAC2Q9Y5I4 1007 aa20.09■□□□□ 0.81
DDR1-246ENST00000485023 COL1A1P02452 1464 aaPredicted RBP20.09■□□□□ 0.81
DDR1-246ENST00000485023 ARAP2Q8WZ64 1704 aa20.08■□□□□ 0.81
DDR1-246ENST00000485023 TMEM88BA6NKF7 163 aa20.08■□□□□ 0.81
DDR1-246ENST00000485023 PHKA1P46020 1223 aa20.08■□□□□ 0.81
DDR1-246ENST00000485023 PDE3AQ14432 1141 aa20.08■□□□□ 0.81
DDR1-246ENST00000485023 CDC37L1Q7L3B6 337 aa20.08■□□□□ 0.81
DDR1-246ENST00000485023 NEUROD6Q96NK8 337 aa20.08■□□□□ 0.81
DDR1-246ENST00000485023 CREBZFQ9NS37 354 aa20.08■□□□□ 0.81
DDR1-246ENST00000485023 FKBP1AP62942 108 aaKnown RBP20.07■□□□□ 0.8
DDR1-246ENST00000485023 GRIK5Q16478 980 aa20.07■□□□□ 0.8
DDR1-246ENST00000485023 ZBTB40Q9NUA8 1239 aa20.07■□□□□ 0.8
DDR1-246ENST00000485023 WNT10BO00744 389 aa20.06■□□□□ 0.8
DDR1-246ENST00000485023 CELF2O95319 508 aaKnown RBP20.06■□□□□ 0.8
DDR1-246ENST00000485023 RBM5P52756 815 aaKnown RBP eCLIP20.06■□□□□ 0.8
DDR1-246ENST00000485023 RRP1P56182 461 aaKnown RBP20.06■□□□□ 0.8
DDR1-246ENST00000485023 SULF1Q8IWU6 871 aa20.06■□□□□ 0.8
DDR1-246ENST00000485023 XAGE2Q96GT9 111 aa20.06■□□□□ 0.8
DDR1-246ENST00000485023 MKRN1Q9UHC7 482 aaKnown RBP20.06■□□□□ 0.8
DDR1-246ENST00000485023 ABT1Q9ULW3 272 aaKnown RBP20.06■□□□□ 0.8
DDR1-246ENST00000485023 TTF2Q9UNY4 1162 aaKnown RBP20.06■□□□□ 0.8
DDR1-246ENST00000485023 AKAP2Q9Y2D5 859 aa20.06■□□□□ 0.8
DDR1-246ENST00000485023 DLGAP5Q15398 846 aa20.05■□□□□ 0.8
DDR1-246ENST00000485023 CFAP100Q494V2 611 aa20.05■□□□□ 0.8
DDR1-246ENST00000485023 CCDC102BQ68D86 513 aa20.05■□□□□ 0.8
DDR1-246ENST00000485023 DNAJC5GQ8N7S2 189 aa20.05■□□□□ 0.8
DDR1-246ENST00000485023 GNL3LQ9NVN8 582 aaKnown RBP20.05■□□□□ 0.8
DDR1-246ENST00000485023 EXOC6BQ9Y2D4 811 aa20.05■□□□□ 0.8
DDR1-246ENST00000485023 CST9Q5W186 159 aa20.04■□□□□ 0.8
DDR1-246ENST00000485023 KLRG1Q96E93 195 aa20.04■□□□□ 0.8
DDR1-246ENST00000485023 CLRN2A0PK11 232 aa20.03■□□□□ 0.8
DDR1-246ENST00000485023 GORABQ5T7V8 394 aa20.03■□□□□ 0.8
DDR1-246ENST00000485023 TBC1D22AQ8WUA7 517 aa20.03■□□□□ 0.8
DDR1-246ENST00000485023 CHMP4BQ9H444 224 aaKnown RBP20.03■□□□□ 0.8
DDR1-246ENST00000485023 MYH13Q9UKX3 1938 aa20.03■□□□□ 0.8
DDR1-246ENST00000485023 AOX1Q06278 1338 aa20.02■□□□□ 0.8
DDR1-246ENST00000485023 APBB1O00213 710 aa20.02■□□□□ 0.8
DDR1-246ENST00000485023 CDCA5Q96FF9 252 aa20.02■□□□□ 0.8
DDR1-246ENST00000485023 ZBED3Q96IU2 234 aaPredicted RBP20.02■□□□□ 0.8
DDR1-246ENST00000485023 BCL11AQ9H165 835 aa20.02■□□□□ 0.8
DDR1-246ENST00000485023 NOP58Q9Y2X3 529 aaKnown RBP20.02■□□□□ 0.8
DDR1-246ENST00000485023 SPDYE2BA6NHP3 402 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 SPDYE6P0CI01 402 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 MMP14P50281 582 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 RASGRF1Q13972 1273 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 TNNI3KQ59H18 835 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 PRAMEF18Q5VWM3 479 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 PAXIP1Q6ZW49 1069 aaPredicted RBP20.01■□□□□ 0.79
DDR1-246ENST00000485023 SIRT2Q8IXJ6 389 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 PRMT6Q96LA8 375 aaPredicted RBP20.01■□□□□ 0.79
DDR1-246ENST00000485023 FPGT-TNNI3KV9GXZ4 949 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 PITPNM2Q9BZ72 1349 aa20.01■□□□□ 0.79
DDR1-246ENST00000485023 HMMRO75330 724 aa20■□□□□ 0.79
DDR1-246ENST00000485023 CAPN15O75808 1086 aa20■□□□□ 0.79
DDR1-246ENST00000485023 CRKP46108 304 aa20■□□□□ 0.79
DDR1-246ENST00000485023 GRM1Q13255 1194 aa20■□□□□ 0.79
DDR1-246ENST00000485023 RPAP2Q8IXW5 612 aaPredicted RBP20■□□□□ 0.79
DDR1-246ENST00000485023 WDR66Q8TBY9 1149 aa20■□□□□ 0.79
DDR1-246ENST00000485023 VEZTQ9HBM0 779 aa20■□□□□ 0.79
DDR1-246ENST00000485023 DENND2AQ9ULE3 1009 aa20■□□□□ 0.79
DDR1-246ENST00000485023 TRPM7Q96QT4 1865 aa20■□□□□ 0.79
DDR1-246ENST00000485023 CNTNAP1P78357 1384 aa19.99■□□□□ 0.79
DDR1-246ENST00000485023 MTMR14Q8NCE2 650 aa19.99■□□□□ 0.79
DDR1-246ENST00000485023 DBNDD2Q9BQY9 259 aa19.99■□□□□ 0.79
DDR1-246ENST00000485023 TLR7Q9NYK1 1049 aaKnown RBP19.99■□□□□ 0.79
DDR1-246ENST00000485023 SEMA3EO15041 775 aa19.98■□□□□ 0.79
DDR1-246ENST00000485023 MYO1BO43795 1136 aa19.98■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 137.7 ms