RNA–Protein interactions for RNA: ENST00000484886.1

SNX17-206, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-206ENST00000484886 GLIS2Q9BZE0 524 aaPredicted RBP23.72■■□□□ 1.39
SNX17-206ENST00000484886 DDX19BQ9UMR2 479 aa23.72■■□□□ 1.39
SNX17-206ENST00000484886 TRAF5O00463 557 aa23.71■■□□□ 1.39
SNX17-206ENST00000484886 ATP8B2P98198 1209 aa23.71■■□□□ 1.39
SNX17-206ENST00000484886 OS9Q13438 667 aaPredicted RBP23.71■■□□□ 1.39
SNX17-206ENST00000484886 PGAP2Q9UHJ9 254 aa23.71■■□□□ 1.39
SNX17-206ENST00000484886 TFCP2Q12800 502 aa23.7■■□□□ 1.38
SNX17-206ENST00000484886 SCARF1Q14162 830 aa23.7■■□□□ 1.38
SNX17-206ENST00000484886 MFSD14BQ5SR56 506 aa23.7■■□□□ 1.38
SNX17-206ENST00000484886 CDC37L1Q7L3B6 337 aa23.7■■□□□ 1.38
SNX17-206ENST00000484886 CERS5Q8N5B7 392 aa23.7■■□□□ 1.38
SNX17-206ENST00000484886 GGA3Q9NZ52 723 aa23.7■■□□□ 1.38
SNX17-206ENST00000484886 FAM205AQ6ZU69 1335 aa23.69■■□□□ 1.38
SNX17-206ENST00000484886 TMEM88BA6NKF7 163 aa23.69■■□□□ 1.38
SNX17-206ENST00000484886 FMR1Q06787 632 aaKnown RBP eCLIP23.69■■□□□ 1.38
SNX17-206ENST00000484886 KRT26Q7Z3Y9 468 aa23.69■■□□□ 1.38
SNX17-206ENST00000484886 USP48Q86UV5 1035 aa23.69■■□□□ 1.38
SNX17-206ENST00000484886 CHMP4BQ9H444 224 aaKnown RBP23.69■■□□□ 1.38
SNX17-206ENST00000484886 CREBZFQ9NS37 354 aa23.69■■□□□ 1.38
SNX17-206ENST00000484886 AKAP2Q9Y2D5 859 aa23.69■■□□□ 1.38
SNX17-206ENST00000484886 ASTN2O75129 1339 aaPredicted RBP23.68■■□□□ 1.38
SNX17-206ENST00000484886 FKBP1AP62942 108 aaKnown RBP23.68■■□□□ 1.38
SNX17-206ENST00000484886 POLA2Q14181 598 aa23.68■■□□□ 1.38
SNX17-206ENST00000484886 PDE3AQ14432 1141 aa23.68■■□□□ 1.38
SNX17-206ENST00000484886 C20orf194Q5TEA3 1177 aa23.68■■□□□ 1.38
SNX17-206ENST00000484886 SSH3Q8TE77 659 aa23.68■■□□□ 1.38
SNX17-206ENST00000484886 SURF6O75683 361 aaKnown RBP23.67■■□□□ 1.38
SNX17-206ENST00000484886 MMP14P50281 582 aa23.67■■□□□ 1.38
SNX17-206ENST00000484886 ANGEL2Q5VTE6 544 aaKnown RBP23.67■■□□□ 1.38
SNX17-206ENST00000484886 SULF1Q8IWU6 871 aa23.67■■□□□ 1.38
SNX17-206ENST00000484886 ZNF408Q9H9D4 720 aa23.67■■□□□ 1.38
SNX17-206ENST00000484886 GNL3LQ9NVN8 582 aaKnown RBP23.67■■□□□ 1.38
SNX17-206ENST00000484886 MYH13Q9UKX3 1938 aa23.67■■□□□ 1.38
SNX17-206ENST00000484886 CEP85Q6P2H3 762 aa23.66■■□□□ 1.38
SNX17-206ENST00000484886 NEUROD6Q96NK8 337 aa23.66■■□□□ 1.38
SNX17-206ENST00000484886 TRPM7Q96QT4 1865 aa23.65■■□□□ 1.38
SNX17-206ENST00000484886 ADM5C9JUS6 153 aa23.65■■□□□ 1.38
SNX17-206ENST00000484886 ADORA1P30542 326 aa23.65■■□□□ 1.38
SNX17-206ENST00000484886 RBM5P52756 815 aaKnown RBP eCLIP23.65■■□□□ 1.38
SNX17-206ENST00000484886 TIMM10P62072 90 aa23.65■■□□□ 1.38
SNX17-206ENST00000484886 DLGAP5Q15398 846 aa23.65■■□□□ 1.38
SNX17-206ENST00000484886 NBPF9Q3BBW0 867 aa23.65■■□□□ 1.38
SNX17-206ENST00000484886 TBC1D22AQ8WUA7 517 aa23.65■■□□□ 1.38
SNX17-206ENST00000484886 ABT1Q9ULW3 272 aaKnown RBP23.65■■□□□ 1.38
SNX17-206ENST00000484886 POLR2AP24928 1970 aaKnown RBP23.65■■□□□ 1.38
SNX17-206ENST00000484886 ARAP2Q8WZ64 1704 aa23.64■■□□□ 1.38
SNX17-206ENST00000484886 A0A1B0GUL7 405 aa23.64■■□□□ 1.37
SNX17-206ENST00000484886 CELF2O95319 508 aaKnown RBP23.64■■□□□ 1.37
SNX17-206ENST00000484886 TTF2Q9UNY4 1162 aaKnown RBP23.64■■□□□ 1.37
SNX17-206ENST00000484886 WNT10BO00744 389 aa23.63■■□□□ 1.37
SNX17-206ENST00000484886 GORABQ5T7V8 394 aa23.63■■□□□ 1.37
SNX17-206ENST00000484886 KLRG1Q96E93 195 aa23.63■■□□□ 1.37
SNX17-206ENST00000484886 PHKA1P46020 1223 aa23.62■■□□□ 1.37
SNX17-206ENST00000484886 CFAP100Q494V2 611 aa23.62■■□□□ 1.37
SNX17-206ENST00000484886 DLK2Q6UY11 383 aa23.62■■□□□ 1.37
SNX17-206ENST00000484886 DNAJC5GQ8N7S2 189 aa23.62■■□□□ 1.37
SNX17-206ENST00000484886 XAGE2Q96GT9 111 aa23.62■■□□□ 1.37
SNX17-206ENST00000484886 ZBTB40Q9NUA8 1239 aa23.62■■□□□ 1.37
SNX17-206ENST00000484886 MKRN1Q9UHC7 482 aaKnown RBP23.62■■□□□ 1.37
SNX17-206ENST00000484886 CCDC102BQ68D86 513 aa23.61■■□□□ 1.37
SNX17-206ENST00000484886 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.61■■□□□ 1.37
SNX17-206ENST00000484886 PITPNM2Q9BZ72 1349 aa23.6■■□□□ 1.37
SNX17-206ENST00000484886 MYO1BO43795 1136 aa23.6■■□□□ 1.37
SNX17-206ENST00000484886 HMMRO75330 724 aa23.6■■□□□ 1.37
SNX17-206ENST00000484886 CST9Q5W186 159 aa23.6■■□□□ 1.37
SNX17-206ENST00000484886 WDR66Q8TBY9 1149 aa23.6■■□□□ 1.37
SNX17-206ENST00000484886 SCAF8Q9UPN6 1271 aaKnown RBP23.6■■□□□ 1.37
SNX17-206ENST00000484886 CEP350Q5VT06 3117 aa23.6■■□□□ 1.37
SNX17-206ENST00000484886 RRP1P56182 461 aaKnown RBP23.59■■□□□ 1.37
SNX17-206ENST00000484886 PAXIP1Q6ZW49 1069 aaPredicted RBP23.59■■□□□ 1.37
SNX17-206ENST00000484886 RPAP2Q8IXW5 612 aaPredicted RBP23.59■■□□□ 1.37
SNX17-206ENST00000484886 DENND2AQ9ULE3 1009 aa23.59■■□□□ 1.37
SNX17-206ENST00000484886 NOP58Q9Y2X3 529 aaKnown RBP23.59■■□□□ 1.37
SNX17-206ENST00000484886 PCDHAC2Q9Y5I4 1007 aa23.59■■□□□ 1.37
SNX17-206ENST00000484886 COL1A1P02452 1464 aaPredicted RBP23.58■■□□□ 1.37
SNX17-206ENST00000484886 SEMA3EO15041 775 aa23.58■■□□□ 1.37
SNX17-206ENST00000484886 EXOC6BQ9Y2D4 811 aa23.58■■□□□ 1.37
SNX17-206ENST00000484886 SPDYE2BA6NHP3 402 aa23.57■■□□□ 1.36
SNX17-206ENST00000484886 SPDYE6P0CI01 402 aa23.57■■□□□ 1.36
SNX17-206ENST00000484886 GRIK5Q16478 980 aa23.57■■□□□ 1.36
SNX17-206ENST00000484886 APOBEC3FQ8IUX4 373 aaKnown RBP23.57■■□□□ 1.36
SNX17-206ENST00000484886 MTMR14Q8NCE2 650 aa23.57■■□□□ 1.36
SNX17-206ENST00000484886 CDCA5Q96FF9 252 aa23.57■■□□□ 1.36
SNX17-206ENST00000484886 ZBED3Q96IU2 234 aaPredicted RBP23.57■■□□□ 1.36
SNX17-206ENST00000484886 SERPINA10Q9UK55 444 aa23.57■■□□□ 1.36
SNX17-206ENST00000484886 MAST3O60307 1309 aa23.57■■□□□ 1.36
SNX17-206ENST00000484886 CNTNAP1P78357 1384 aa23.56■■□□□ 1.36
SNX17-206ENST00000484886 CLRN2A0PK11 232 aa23.56■■□□□ 1.36
SNX17-206ENST00000484886 CRKP46108 304 aa23.56■■□□□ 1.36
SNX17-206ENST00000484886 TNNI3KQ59H18 835 aa23.56■■□□□ 1.36
SNX17-206ENST00000484886 ERC1Q8IUD2 1116 aa23.56■■□□□ 1.36
SNX17-206ENST00000484886 VEZTQ9HBM0 779 aa23.56■■□□□ 1.36
SNX17-206ENST00000484886 FPGT-TNNI3KV9GXZ4 949 aa23.56■■□□□ 1.36
SNX17-206ENST00000484886 ECM29Q5VYK3 1845 aa23.55■■□□□ 1.36
SNX17-206ENST00000484886 DEFB115Q30KQ5 88 aa23.55■■□□□ 1.36
SNX17-206ENST00000484886 HSP90AB4PQ58FF6 505 aa23.55■■□□□ 1.36
SNX17-206ENST00000484886 TEKT1Q969V4 418 aa23.55■■□□□ 1.36
SNX17-206ENST00000484886 PRMT6Q96LA8 375 aaPredicted RBP23.55■■□□□ 1.36
SNX17-206ENST00000484886 GPR108Q9NPR9 543 aa23.55■■□□□ 1.36
SNX17-206ENST00000484886 SUGT1Q9Y2Z0 365 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms