RNA–Protein interactions for RNA: ENST00000484203.5

PTCD3-215, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 2

Gene PTCD3, Length 928 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-215ENST00000484203 HYPKQ9NX55 129 aa7.97□□□□□ -1.13
PTCD3-215ENST00000484203 UBR2Q8IWV8 1755 aa7.97□□□□□ -1.13
PTCD3-215ENST00000484203 GLTPD2A6NH11 291 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 NRG2O14511 850 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-215ENST00000484203 C21orf2O43822 256 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 VEGFAP15692 232 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-215ENST00000484203 HSPA6P17066 643 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 HOXA10P31260 410 aaPredicted RBP7.96□□□□□ -1.14
PTCD3-215ENST00000484203 SLC19A1P41440 591 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 HLFQ16534 295 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 CRY2Q49AN0 593 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 ERFEQ4G0M1 354 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 HDGFL1Q5TGJ6 251 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 LIAT1Q6ZQX7 453 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 ZNF34Q8IZ26 560 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 RPGRQ92834 1020 aaKnown RBP7.96□□□□□ -1.14
PTCD3-215ENST00000484203 NLRP3Q96P20 1036 aa7.96□□□□□ -1.14
PTCD3-215ENST00000484203 UTP14AQ9BVJ6 771 aaKnown RBP7.96□□□□□ -1.14
PTCD3-215ENST00000484203 LAS1LQ9Y4W2 734 aaKnown RBP7.96□□□□□ -1.14
PTCD3-215ENST00000484203 NFKBIEO00221 500 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 APAF1O14727 1248 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 USP17L8P0C7I0 530 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 KCNH2Q12809 1159 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 CCDC27Q2M243 656 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 SLC10A5Q5PT55 438 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 TTLL7Q6ZT98 887 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 COPS6Q7L5N1 327 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 LRRN4Q8WUT4 740 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 C7orf43Q8WVR3 580 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 EMID1Q96A84 441 aaPredicted RBP7.95□□□□□ -1.14
PTCD3-215ENST00000484203 RBM17Q96I25 401 aaKnown RBP7.95□□□□□ -1.14
PTCD3-215ENST00000484203 CRAMP1Q96RY5 1269 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 VPS33BQ9H267 617 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 CHD4Q14839 1912 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 RIC1Q4ADV7 1423 aa7.95□□□□□ -1.14
PTCD3-215ENST00000484203 CEP350Q5VT06 3117 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 KIF13BQ9NQT8 1826 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 IQCA1LA6NCM1 817 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 BBOX1O75936 387 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 ZNF853P0CG23 659 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 FKBP4Q02790 459 aaKnown RBP eCLIP7.94□□□□□ -1.14
PTCD3-215ENST00000484203 RASSF7Q02833 373 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 TCIRG1Q13488 830 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 DUSP27Q5VZP5 1158 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 PTCRAQ6ISU1 281 aaPredicted RBP7.94□□□□□ -1.14
PTCD3-215ENST00000484203 TMC4Q7Z404 712 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 LRP10Q7Z4F1 713 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 SMC1BQ8NDV3 1235 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 PLBD2Q8NHP8 589 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 XAGE3Q8WTP9 111 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 PSMD1Q99460 953 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 MAP10Q9P2G4 905 aa7.94□□□□□ -1.14
PTCD3-215ENST00000484203 FAM177BA6PVY3 158 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 DDX58O95786 925 aaKnown RBP7.93□□□□□ -1.14
PTCD3-215ENST00000484203 F12P00748 615 aaPredicted RBP7.93□□□□□ -1.14
PTCD3-215ENST00000484203 GPTP24298 496 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 RPIAP49247 311 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 AIMP1Q12904 312 aaKnown RBP7.93□□□□□ -1.14
PTCD3-215ENST00000484203 TRIM28Q13263 835 aaKnown RBP7.93□□□□□ -1.14
PTCD3-215ENST00000484203 CCDC30Q5VVM6 783 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 SUSD4Q5VX71 490 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 SUPT20HQ8NEM7 779 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 JDP2Q8WYK2 163 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 UNC93B1Q9H1C4 597 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 NMRK2Q9NPI5 230 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 MBIPQ9NS73 344 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 TRMT112Q9UI30 125 aaKnown RBP7.93□□□□□ -1.14
PTCD3-215ENST00000484203 IL16Q14005 1332 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 SH3TC1Q8TE82 1336 aa7.93□□□□□ -1.14
PTCD3-215ENST00000484203 CD2BP2O95400 341 aaKnown RBP7.92□□□□□ -1.14
PTCD3-215ENST00000484203 NTSR2O95665 410 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 SPRYD7Q5W111 196 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 TRAF7Q6Q0C0 670 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 DDX46Q7L014 1031 aaKnown RBP7.92□□□□□ -1.14
PTCD3-215ENST00000484203 NLRP10Q86W26 655 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 BANK1Q8NDB2 785 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 RRAGCQ9HB90 399 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 MRS2Q9HD23 443 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 CHPF2Q9P2E5 772 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 UBN2Q6ZU65 1347 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 NRXN2Q9P2S2 1712 aa7.92□□□□□ -1.14
PTCD3-215ENST00000484203 SIPA1L3O60292 1781 aaPredicted RBP7.92□□□□□ -1.14
PTCD3-215ENST00000484203 TRIM32Q13049 653 aa7.91□□□□□ -1.14
PTCD3-215ENST00000484203 PROSER3Q2NL68 480 aa7.91□□□□□ -1.14
PTCD3-215ENST00000484203 STK31Q9BXU1 1019 aa7.91□□□□□ -1.14
PTCD3-215ENST00000484203 SCN7AQ01118 1682 aa7.91□□□□□ -1.14
PTCD3-215ENST00000484203 IARSP41252 1262 aaKnown RBP7.9□□□□□ -1.14
PTCD3-215ENST00000484203 EIF6P56537 245 aaKnown RBP7.9□□□□□ -1.14
PTCD3-215ENST00000484203 NR6A1Q15406 480 aa7.9□□□□□ -1.14
PTCD3-215ENST00000484203 PNMA8AQ86V59 439 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-215ENST00000484203 WDR63Q8IWG1 891 aa7.9□□□□□ -1.14
PTCD3-215ENST00000484203 WWC1Q8IX03 1113 aa7.9□□□□□ -1.14
PTCD3-215ENST00000484203 SYNE4Q8N205 404 aa7.9□□□□□ -1.14
PTCD3-215ENST00000484203 HMX1Q9NP08 348 aaPredicted RBP7.9□□□□□ -1.14
PTCD3-215ENST00000484203 ATP6V0A2Q9Y487 856 aa7.9□□□□□ -1.14
PTCD3-215ENST00000484203 ABCC12Q96J65 1359 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 FZD9O00144 591 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 ANXA1P04083 346 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 NEXNQ0ZGT2 675 aa7.89□□□□□ -1.15
PTCD3-215ENST00000484203 GRAPQ13588 217 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms