RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CLEC17AQ6ZS10 378 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 TICAM2Q86XR7 235 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 CDC5LQ99459 802 aaKnown RBP10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 DSCC1Q9BVC3 393 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 WWC3Q9ULE0 1092 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 MINPP1Q9UNW1 487 aa10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 U3KPZ7 1027 aaPredicted RBP10.56□□□□□ -0.72
CDC42SE1-204ENST00000483763 BAG4O95429 457 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 SLC5A1P13866 664 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 GSE1Q14687 1217 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 BLOC1S2Q6QNY1 142 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 ANKRD18AQ8IVF6 992 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 NECAB1Q8N987 351 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 SPATA5Q8NB90 893 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 BSDC1Q9NW68 430 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 STK32BQ9NY57 414 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 IQSEC3Q9UPP2 1182 aaPredicted RBP10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 SPEF2Q9C093 1822 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 LAMB2P55268 1798 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 PSMA5P28066 241 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 ADD2P35612 726 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 APPBP2Q92624 585 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 NLRP3Q96P20 1036 aa10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 MYO5AQ9Y4I1 1855 aaKnown RBP10.55□□□□□ -0.72
CDC42SE1-204ENST00000483763 TCRBV5S4A2TA0A5A2 114 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 TRAK2O60296 914 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 ZFYP08048 801 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 KLRK1P26718 216 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 GYG1P46976 350 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 CCDC83Q8IWF9 413 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 AKT1S1Q96B36 256 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 NEK1Q96PY6 1258 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 LRRC2Q9BYS8 371 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 NYXQ9GZU5 481 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 C4AP0C0L4 1744 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 ZNF532Q9HCE3 1301 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 GPAA1O43292 621 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 FGAP02671 866 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 UQCRFS1P1P0C7P4 283 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 GYS1P13807 737 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 PDE6AP16499 860 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 RPS8P62241 208 aaKnown RBP10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 COL23A1Q86Y22 540 aaPredicted RBP10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 IL27Q8NEV9 243 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 GBP4Q96PP9 640 aa10.54□□□□□ -0.72
CDC42SE1-204ENST00000483763 NPHP1O15259 732 aa10.53□□□□□ -0.72
CDC42SE1-204ENST00000483763 BRD1O95696 1058 aa10.53□□□□□ -0.72
CDC42SE1-204ENST00000483763 HAND2P61296 217 aa10.53□□□□□ -0.72
CDC42SE1-204ENST00000483763 DDX11L8A8MPP1 907 aa10.53□□□□□ -0.72
CDC42SE1-204ENST00000483763 TTF1Q15361 905 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-204ENST00000483763 GZF1Q9H116 711 aaPredicted RBP10.53□□□□□ -0.72
CDC42SE1-204ENST00000483763 COL24A1Q17RW2 1714 aa10.53□□□□□ -0.72
CDC42SE1-204ENST00000483763 ZNF804BA4D1E1 1349 aa10.52□□□□□ -0.72
CDC42SE1-204ENST00000483763 PNPLA7Q6ZV29 1317 aa10.52□□□□□ -0.72
CDC42SE1-204ENST00000483763 E7EWF7 191 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 KRT32Q14532 448 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 UBE3CQ15386 1083 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 CHST3Q7LGC8 479 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 NKX2-3Q8TAU0 364 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 PPP1R1BQ9UD71 204 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 DENND2AQ9ULE3 1009 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 CASZ1Q86V15 1759 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 LRRFIP1Q32MZ4 808 aaKnown RBP10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 MCTP1Q6DN14 999 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 Q6ZUG5 572 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 MAGEB6Q8N7X4 407 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 FAM84BQ96KN1 310 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 ALDH8A1Q9H2A2 487 aaPredicted RBP10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 ARAP2Q8WZ64 1704 aa10.52□□□□□ -0.73
CDC42SE1-204ENST00000483763 UBR3Q6ZT12 1888 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 CARMIL3Q8ND23 1372 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 SYT1P21579 422 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 EXOSC10Q01780 885 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 STK3Q13188 491 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 UBE4AQ14139 1066 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 FOXD4L6Q3SYB3 417 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 PRR5LQ6MZQ0 368 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 FOXD4L3Q6VB84 417 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 TXNRD3Q86VQ6 643 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 NBPF3Q9H094 633 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 SH2B1Q9NRF2 756 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 COL1A1P02452 1464 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 TNRC6CQ9HCJ0 1690 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 GJB2P29033 226 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 DHX32Q7L7V1 743 aaKnown RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 CNBD1Q8NA66 436 aa10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 ZSCAN31Q96LW9 406 aaPredicted RBP10.51□□□□□ -0.73
CDC42SE1-204ENST00000483763 ADGRA1Q86SQ6 560 aa10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 BRF1Q92994 677 aa10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 STRBPQ96SI9 672 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 GPHNQ9NQX3 736 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 HMGB2P26583 209 aaKnown RBP10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 DDR1Q08345 913 aa10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 ZSCAN25Q6NSZ9 544 aa10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 LMBRD1Q9NUN5 540 aa10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 SMC3Q9UQE7 1217 aa10.5□□□□□ -0.73
CDC42SE1-204ENST00000483763 PTGER2P43116 358 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms