RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 FBXW7Q969H0 707 aa19.27■□□□□ 0.68
RPP40-206ENST00000483546 A0A1B0GUL7 405 aa19.26■□□□□ 0.67
RPP40-206ENST00000483546 SEMA3EO15041 775 aa19.26■□□□□ 0.67
RPP40-206ENST00000483546 TBC1D22AQ8WUA7 517 aa19.26■□□□□ 0.67
RPP40-206ENST00000483546 FRAT2O75474 233 aaPredicted RBP19.25■□□□□ 0.67
RPP40-206ENST00000483546 BCAMP50895 628 aa19.25■□□□□ 0.67
RPP40-206ENST00000483546 HDAC9Q9UKV0 1011 aa19.25■□□□□ 0.67
RPP40-206ENST00000483546 SIRT2Q8IXJ6 389 aa19.24■□□□□ 0.67
RPP40-206ENST00000483546 PGAP2Q9UHJ9 254 aa19.24■□□□□ 0.67
RPP40-206ENST00000483546 CLEC11AQ9Y240 323 aa19.24■□□□□ 0.67
RPP40-206ENST00000483546 RAB11FIP3O75154 756 aa19.23■□□□□ 0.67
RPP40-206ENST00000483546 TIMM10P62072 90 aa19.23■□□□□ 0.67
RPP40-206ENST00000483546 KIF4BQ2VIQ3 1234 aa19.23■□□□□ 0.67
RPP40-206ENST00000483546 XAGE2Q96GT9 111 aa19.23■□□□□ 0.67
RPP40-206ENST00000483546 SUGT1Q9Y2Z0 365 aa19.23■□□□□ 0.67
RPP40-206ENST00000483546 PDS5AQ29RF7 1337 aaKnown RBP19.23■□□□□ 0.67
RPP40-206ENST00000483546 POTEIP0CG38 1075 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 POTEJP0CG39 1038 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 TNNI3KQ59H18 835 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 MFSD14BQ5SR56 506 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 CCDC102BQ68D86 513 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 WDR66Q8TBY9 1149 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 NEUROD6Q96NK8 337 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 CRBNQ96SW2 442 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 MYOZ2Q9NPC6 264 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 DENND2AQ9ULE3 1009 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 EXOC6BQ9Y2D4 811 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 FPGT-TNNI3KV9GXZ4 949 aa19.22■□□□□ 0.67
RPP40-206ENST00000483546 SHTN1A0MZ66 631 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 GORABQ5T7V8 394 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 SAMD7Q7Z3H4 446 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 KIAA0825Q8IV33 1275 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 CERS5Q8N5B7 392 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 TRPM4Q8TD43 1214 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 KIF1BPQ96EK5 621 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 MXD3Q9BW11 206 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 SUPT16HQ9Y5B9 1047 aaKnown RBP19.21■□□□□ 0.67
RPP40-206ENST00000483546 ECM29Q5VYK3 1845 aa19.21■□□□□ 0.67
RPP40-206ENST00000483546 ADORA1P30542 326 aa19.2■□□□□ 0.66
RPP40-206ENST00000483546 PHKA1P46020 1223 aa19.2■□□□□ 0.66
RPP40-206ENST00000483546 HIRAP54198 1017 aaPredicted RBP19.2■□□□□ 0.66
RPP40-206ENST00000483546 TBC1D10BQ4KMP7 808 aaPredicted RBP19.2■□□□□ 0.66
RPP40-206ENST00000483546 IQSEC3Q9UPP2 1182 aaPredicted RBP19.2■□□□□ 0.66
RPP40-206ENST00000483546 SALL1Q9NSC2 1324 aa19.2■□□□□ 0.66
RPP40-206ENST00000483546 UQCRFS1P1P0C7P4 283 aa19.19■□□□□ 0.66
RPP40-206ENST00000483546 CHAF1AQ13111 956 aaPredicted RBP19.19■□□□□ 0.66
RPP40-206ENST00000483546 CNTROBQ8N137 903 aa19.19■□□□□ 0.66
RPP40-206ENST00000483546 ZGPATQ8N5A5 531 aaKnown RBP19.19■□□□□ 0.66
RPP40-206ENST00000483546 MTMR14Q8NCE2 650 aa19.19■□□□□ 0.66
RPP40-206ENST00000483546 RHPN1Q8TCX5 695 aa19.19■□□□□ 0.66
RPP40-206ENST00000483546 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.19■□□□□ 0.66
RPP40-206ENST00000483546 MAST3O60307 1309 aa19.19■□□□□ 0.66
RPP40-206ENST00000483546 HSPA6P17066 643 aa19.18■□□□□ 0.66
RPP40-206ENST00000483546 HDLBPQ00341 1268 aaKnown RBP19.18■□□□□ 0.66
RPP40-206ENST00000483546 CCDC158Q5M9N0 1113 aa19.18■□□□□ 0.66
RPP40-206ENST00000483546 JAG2Q9Y219 1238 aa19.18■□□□□ 0.66
RPP40-206ENST00000483546 POLR2AP24928 1970 aaKnown RBP19.18■□□□□ 0.66
RPP40-206ENST00000483546 PITPNM2Q9BZ72 1349 aa19.18■□□□□ 0.66
RPP40-206ENST00000483546 TRPM7Q96QT4 1865 aa19.18■□□□□ 0.66
RPP40-206ENST00000483546 ITGBL1O95965 494 aaPredicted RBP19.17■□□□□ 0.66
RPP40-206ENST00000483546 ARID4AP29374 1257 aaPredicted RBP19.17■□□□□ 0.66
RPP40-206ENST00000483546 RBM26Q5T8P6 1007 aaKnown RBP19.17■□□□□ 0.66
RPP40-206ENST00000483546 MAP1SQ66K74 1059 aaPredicted RBP19.17■□□□□ 0.66
RPP40-206ENST00000483546 CDC37L1Q7L3B6 337 aa19.17■□□□□ 0.66
RPP40-206ENST00000483546 CLASRPQ8N2M8 674 aaKnown RBP19.17■□□□□ 0.66
RPP40-206ENST00000483546 ZNF512BQ96KM6 892 aaPredicted RBP19.17■□□□□ 0.66
RPP40-206ENST00000483546 MRIQ9BWK5 157 aa19.17■□□□□ 0.66
RPP40-206ENST00000483546 SERPINA10Q9UK55 444 aa19.17■□□□□ 0.66
RPP40-206ENST00000483546 PASKQ96RG2 1323 aa19.17■□□□□ 0.66
RPP40-206ENST00000483546 COL1A1P02452 1464 aaPredicted RBP19.16■□□□□ 0.66
RPP40-206ENST00000483546 EGFRP00533 1210 aa19.16■□□□□ 0.66
RPP40-206ENST00000483546 RASGRF1Q13972 1273 aa19.16■□□□□ 0.66
RPP40-206ENST00000483546 DCPSQ96C86 337 aaKnown RBP19.16■□□□□ 0.66
RPP40-206ENST00000483546 EAF2Q96CJ1 260 aaPredicted RBP19.16■□□□□ 0.66
RPP40-206ENST00000483546 ZBED3Q96IU2 234 aaPredicted RBP19.16■□□□□ 0.66
RPP40-206ENST00000483546 DCTPP1Q9H773 170 aa19.16■□□□□ 0.66
RPP40-206ENST00000483546 TTF2Q9UNY4 1162 aaKnown RBP19.16■□□□□ 0.66
RPP40-206ENST00000483546 PCDHB15Q9Y5E8 787 aa19.16■□□□□ 0.66
RPP40-206ENST00000483546 WNT10BO00744 389 aa19.15■□□□□ 0.66
RPP40-206ENST00000483546 APLP1P51693 650 aa19.15■□□□□ 0.66
RPP40-206ENST00000483546 SCARF1Q14162 830 aa19.15■□□□□ 0.66
RPP40-206ENST00000483546 DLGAP5Q15398 846 aa19.15■□□□□ 0.66
RPP40-206ENST00000483546 DBNDD2Q9BQY9 259 aa19.15■□□□□ 0.66
RPP40-206ENST00000483546 AKAP11Q9UKA4 1901 aa19.14■□□□□ 0.65
RPP40-206ENST00000483546 F8W031 263 aaPredicted RBP19.14■□□□□ 0.65
RPP40-206ENST00000483546 MYO1BO43795 1136 aa19.14■□□□□ 0.65
RPP40-206ENST00000483546 IGSF3O75054 1194 aa19.14■□□□□ 0.65
RPP40-206ENST00000483546 TTC39AQ5SRH9 613 aa19.14■□□□□ 0.65
RPP40-206ENST00000483546 SPTY2D1Q68D10 685 aaPredicted RBP19.14■□□□□ 0.65
RPP40-206ENST00000483546 AACSQ86V21 672 aa19.14■□□□□ 0.65
RPP40-206ENST00000483546 LRRCC1Q9C099 1032 aa19.14■□□□□ 0.65
RPP40-206ENST00000483546 DBNLQ9UJU6 430 aaKnown RBP19.14■□□□□ 0.65
RPP40-206ENST00000483546 CFAP100Q494V2 611 aa19.13■□□□□ 0.65
RPP40-206ENST00000483546 SULF1Q8IWU6 871 aa19.13■□□□□ 0.65
RPP40-206ENST00000483546 SPATA5Q8NB90 893 aa19.13■□□□□ 0.65
RPP40-206ENST00000483546 GGA3Q9NZ52 723 aa19.13■□□□□ 0.65
RPP40-206ENST00000483546 SPDYE2BA6NHP3 402 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 LDHBP07195 334 aaKnown RBP19.12■□□□□ 0.65
RPP40-206ENST00000483546 SPDYE6P0CI01 402 aa19.12■□□□□ 0.65
RPP40-206ENST00000483546 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms