RNA–Protein interactions for RNA: ENST00000483544.1

LINC00477-201, long intergenic non-protein coding RNA 477, humanhuman

TSL 2 BASIC

Gene LINC00477, Length 1,710 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477-201ENST00000483544 CTNNA3Q9UI47 895 aa14.56□□□□□ -0.08
LINC00477-201ENST00000483544 RNF113AO15541 343 aaKnown RBP14.55□□□□□ -0.08
LINC00477-201ENST00000483544 CYP21A2P08686 494 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 TCIRG1Q13488 830 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 MUM1L1Q5H9M0 696 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 Q6ZUG5 572 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 TTC6Q86TZ1 520 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 SPATA32Q96LK8 384 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 GOLGA6L6A8MZA4 724 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 IFIT1P09914 478 aaKnown RBP14.55□□□□□ -0.08
LINC00477-201ENST00000483544 CALRP27797 417 aaKnown RBP14.55□□□□□ -0.08
LINC00477-201ENST00000483544 RBM43Q6ZSC3 357 aaKnown RBP14.55□□□□□ -0.08
LINC00477-201ENST00000483544 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 EDC3Q96F86 508 aaKnown RBP14.55□□□□□ -0.08
LINC00477-201ENST00000483544 ZNF274Q96GC6 653 aaPredicted RBP14.55□□□□□ -0.08
LINC00477-201ENST00000483544 RSPH14Q9UHP6 348 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 CHMP3Q9Y3E7 222 aa14.55□□□□□ -0.08
LINC00477-201ENST00000483544 MYH3P11055 1940 aa14.54□□□□□ -0.08
LINC00477-201ENST00000483544 GOLIM4O00461 696 aa14.54□□□□□ -0.08
LINC00477-201ENST00000483544 PCCAP05165 728 aaPredicted RBP14.54□□□□□ -0.08
LINC00477-201ENST00000483544 HCLS1P14317 486 aaPredicted RBP14.54□□□□□ -0.08
LINC00477-201ENST00000483544 EXOSC10Q01780 885 aaKnown RBP14.54□□□□□ -0.08
LINC00477-201ENST00000483544 RESTQ13127 1097 aa14.54□□□□□ -0.08
LINC00477-201ENST00000483544 CCDC158Q5M9N0 1113 aa14.54□□□□□ -0.08
LINC00477-201ENST00000483544 KRT222Q8N1A0 295 aa14.54□□□□□ -0.08
LINC00477-201ENST00000483544 LEO1Q8WVC0 666 aaPredicted RBP14.54□□□□□ -0.08
LINC00477-201ENST00000483544 NEUROD6Q96NK8 337 aa14.54□□□□□ -0.08
LINC00477-201ENST00000483544 ANKRD36CQ5JPF3 1778 aa14.54□□□□□ -0.08
LINC00477-201ENST00000483544 LRP6O75581 1613 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 H3BQV1 296 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 IGSF3O75054 1194 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 ADCY5O95622 1261 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 SSR1P43307 286 aaKnown RBP14.53□□□□□ -0.08
LINC00477-201ENST00000483544 CCDC57Q2TAC2 916 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 IFFO2Q5TF58 517 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 DDX46Q7L014 1031 aaKnown RBP14.53□□□□□ -0.08
LINC00477-201ENST00000483544 FAM200AQ8TCP9 573 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 FAM53CQ9NYF3 392 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 WDR19Q8NEZ3 1342 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 CDHR2Q9BYE9 1310 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 NHSL1Q5SYE7 1610 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 TOGARAM1Q9Y4F4 1720 aa14.53□□□□□ -0.08
LINC00477-201ENST00000483544 CTAGE5O15320 804 aa14.52□□□□□ -0.08
LINC00477-201ENST00000483544 PIP4K2AP48426 406 aaPredicted RBP14.52□□□□□ -0.08
LINC00477-201ENST00000483544 EVCP57679 992 aa14.52□□□□□ -0.08
LINC00477-201ENST00000483544 ZKSCAN8Q15776 578 aaPredicted RBP14.52□□□□□ -0.08
LINC00477-201ENST00000483544 KIF6Q6ZMV9 814 aa14.52□□□□□ -0.08
LINC00477-201ENST00000483544 PSMD1Q99460 953 aa14.52□□□□□ -0.08
LINC00477-201ENST00000483544 CLSTN2Q9H4D0 955 aa14.52□□□□□ -0.08
LINC00477-201ENST00000483544 A0A1B0GUL7 405 aa14.52□□□□□ -0.09
LINC00477-201ENST00000483544 A1BGP04217 495 aa14.52□□□□□ -0.09
LINC00477-201ENST00000483544 RAD51AP2Q09MP3 1159 aa14.52□□□□□ -0.09
LINC00477-201ENST00000483544 GIMAP6Q6P9H5 292 aa14.52□□□□□ -0.09
LINC00477-201ENST00000483544 DDX54Q8TDD1 881 aaKnown RBP14.52□□□□□ -0.09
LINC00477-201ENST00000483544 JARID2Q92833 1246 aaPredicted RBP14.52□□□□□ -0.09
LINC00477-201ENST00000483544 ZNF396Q96N95 335 aaPredicted RBP14.52□□□□□ -0.09
LINC00477-201ENST00000483544 ITGB4P16144 1822 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 IRF6O14896 467 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 STARD3NLO95772 234 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 CSF1RP07333 972 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 HSPD1P10809 573 aaKnown RBP14.51□□□□□ -0.09
LINC00477-201ENST00000483544 CASQ1P31415 396 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 CHAF1AQ13111 956 aaPredicted RBP14.51□□□□□ -0.09
LINC00477-201ENST00000483544 RPAINQ86UA6 219 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 ZBTB38Q8NAP3 1195 aaPredicted RBP14.51□□□□□ -0.09
LINC00477-201ENST00000483544 BRF1Q92994 677 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 ZNF512BQ96KM6 892 aaPredicted RBP14.51□□□□□ -0.09
LINC00477-201ENST00000483544 TNMDQ9H2S6 317 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 TMOD3Q9NYL9 352 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 TAF6LQ9Y6J9 622 aa14.51□□□□□ -0.09
LINC00477-201ENST00000483544 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.51□□□□□ -0.09
LINC00477-201ENST00000483544 KIF3CO14782 793 aa14.5□□□□□ -0.09
LINC00477-201ENST00000483544 CYP2C19P33261 490 aa14.5□□□□□ -0.09
LINC00477-201ENST00000483544 ZSCAN25Q6NSZ9 544 aa14.5□□□□□ -0.09
LINC00477-201ENST00000483544 CCDC129Q6ZRS4 1044 aa14.5□□□□□ -0.09
LINC00477-201ENST00000483544 ZBTB9Q96C00 473 aa14.5□□□□□ -0.09
LINC00477-201ENST00000483544 DDX60Q8IY21 1712 aaKnown RBP14.5□□□□□ -0.09
LINC00477-201ENST00000483544 MAST3O60307 1309 aa14.5□□□□□ -0.09
LINC00477-201ENST00000483544 E7EWF7 191 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 TIMM10P62072 90 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 TYRO3Q06418 890 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 SCRN1Q12765 414 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 STK3Q13188 491 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 TTC39AQ5SRH9 613 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 ARHGAP30Q7Z6I6 1101 aaPredicted RBP14.49□□□□□ -0.09
LINC00477-201ENST00000483544 NSUN7Q8NE18 718 aaKnown RBP14.49□□□□□ -0.09
LINC00477-201ENST00000483544 TCEANC2Q96MN5 208 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 SEC62Q99442 399 aaKnown RBP14.49□□□□□ -0.09
LINC00477-201ENST00000483544 ZBTB3Q9H5J0 574 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 SLAIN2Q9P270 581 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 RCOR1Q9UKL0 485 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 SALL1Q9NSC2 1324 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 EVA1CP58658 441 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 TRDNQ13061 729 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 NOLC1Q14978 699 aaKnown RBP eCLIP14.49□□□□□ -0.09
LINC00477-201ENST00000483544 GORABQ5T7V8 394 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 STOX1Q6ZVD7 989 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 FERMT3Q86UX7 667 aa14.49□□□□□ -0.09
LINC00477-201ENST00000483544 NBPF5PQ86XG9 351 aaPredicted RBP14.49□□□□□ -0.09
LINC00477-201ENST00000483544 PLCH1Q4KWH8 1693 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms