RNA–Protein interactions for RNA: ENST00000482902.5

SSR4-209, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 2,409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-209ENST00000482902 ERICH4A6NGS2 130 aa21.05■□□□□ 0.96
SSR4-209ENST00000482902 CAVIN2O95810 425 aa21.05■□□□□ 0.96
SSR4-209ENST00000482902 SKILP12757 684 aa21.05■□□□□ 0.96
SSR4-209ENST00000482902 CCZ1BP86790 482 aa21.05■□□□□ 0.96
SSR4-209ENST00000482902 CCZ1P86791 482 aaPredicted RBP21.05■□□□□ 0.96
SSR4-209ENST00000482902 CHST3Q7LGC8 479 aa21.05■□□□□ 0.96
SSR4-209ENST00000482902 RCOR1Q9UKL0 485 aa21.05■□□□□ 0.96
SSR4-209ENST00000482902 DCCP43146 1447 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 CIAO1O76071 339 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 CREBRFQ8IUR6 639 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 ERVV-2B6SEH9 535 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 M0R2C6 588 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 PPFIA3O75145 1194 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 CADPS2Q86UW7 1296 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 CCAR1Q8IX12 1150 aaKnown RBP21.04■□□□□ 0.96
SSR4-209ENST00000482902 CALCOCO1Q9P1Z2 691 aa21.04■□□□□ 0.96
SSR4-209ENST00000482902 SLU7O95391 586 aaKnown RBP21.03■□□□□ 0.96
SSR4-209ENST00000482902 CDK11BP21127 795 aaKnown RBP21.03■□□□□ 0.96
SSR4-209ENST00000482902 PDIA3P30101 505 aaKnown RBP21.03■□□□□ 0.96
SSR4-209ENST00000482902 ATG3Q9NT62 314 aa21.03■□□□□ 0.96
SSR4-209ENST00000482902 TULP2O00295 520 aa21.03■□□□□ 0.96
SSR4-209ENST00000482902 FKBP4Q02790 459 aaKnown RBP eCLIP21.03■□□□□ 0.96
SSR4-209ENST00000482902 TTLL5Q6EMB2 1281 aa21.03■□□□□ 0.96
SSR4-209ENST00000482902 C11orf57Q6ZUT1 292 aaPredicted RBP21.03■□□□□ 0.96
SSR4-209ENST00000482902 TOM1L2Q6ZVM7 507 aa21.03■□□□□ 0.96
SSR4-209ENST00000482902 CCAR2Q8N163 923 aaKnown RBP21.03■□□□□ 0.96
SSR4-209ENST00000482902 USP28Q96RU2 1077 aa21.03■□□□□ 0.96
SSR4-209ENST00000482902 CEP126Q9P2H0 1117 aa21.03■□□□□ 0.96
SSR4-209ENST00000482902 PARP4Q9UKK3 1724 aaKnown RBP21.02■□□□□ 0.96
SSR4-209ENST00000482902 SALL1Q9NSC2 1324 aa21.02■□□□□ 0.96
SSR4-209ENST00000482902 CCDC69A6NI79 296 aa21.02■□□□□ 0.96
SSR4-209ENST00000482902 SLC20A2Q08357 652 aa21.02■□□□□ 0.96
SSR4-209ENST00000482902 OSBP2Q969R2 916 aa21.02■□□□□ 0.96
SSR4-209ENST00000482902 ZNF274Q96GC6 653 aaPredicted RBP21.02■□□□□ 0.96
SSR4-209ENST00000482902 KCND1Q9NSA2 647 aa21.02■□□□□ 0.96
SSR4-209ENST00000482902 H2AFXP16104 143 aaPredicted RBP21.02■□□□□ 0.95
SSR4-209ENST00000482902 GUCY1B3Q02153 619 aa21.02■□□□□ 0.95
SSR4-209ENST00000482902 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.02■□□□□ 0.95
SSR4-209ENST00000482902 ZNF396Q96N95 335 aaPredicted RBP21.02■□□□□ 0.95
SSR4-209ENST00000482902 TJP1Q07157 1748 aa21.01■□□□□ 0.95
SSR4-209ENST00000482902 LAMA4Q16363 1823 aa21.01■□□□□ 0.95
SSR4-209ENST00000482902 GOLPH3LQ9H4A5 285 aa21.01■□□□□ 0.95
SSR4-209ENST00000482902 TRMT1Q9NXH9 659 aaKnown RBP21.01■□□□□ 0.95
SSR4-209ENST00000482902 WDR17Q8IZU2 1322 aa21.01■□□□□ 0.95
SSR4-209ENST00000482902 GOLGA6L19H0YKK7 550 aa21■□□□□ 0.95
SSR4-209ENST00000482902 NUP188Q5SRE5 1749 aa21■□□□□ 0.95
SSR4-209ENST00000482902 CTAGE5O15320 804 aa21■□□□□ 0.95
SSR4-209ENST00000482902 CAPN2P17655 700 aa21■□□□□ 0.95
SSR4-209ENST00000482902 CCDC57Q2TAC2 916 aa21■□□□□ 0.95
SSR4-209ENST00000482902 GORABQ5T7V8 394 aa21■□□□□ 0.95
SSR4-209ENST00000482902 ATL3Q6DD88 541 aa21■□□□□ 0.95
SSR4-209ENST00000482902 CCDC73Q6ZRK6 1079 aa21■□□□□ 0.95
SSR4-209ENST00000482902 KCPQ6ZWJ8 1503 aa20.99■□□□□ 0.95
SSR4-209ENST00000482902 CYP2C19P33261 490 aa20.99■□□□□ 0.95
SSR4-209ENST00000482902 CCDC158Q5M9N0 1113 aa20.99■□□□□ 0.95
SSR4-209ENST00000482902 TTC39AQ5SRH9 613 aa20.99■□□□□ 0.95
SSR4-209ENST00000482902 PRDM11Q9NQV5 511 aa20.99■□□□□ 0.95
SSR4-209ENST00000482902 ADORA1P30542 326 aa20.99■□□□□ 0.95
SSR4-209ENST00000482902 IPO4Q8TEX9 1081 aaKnown RBP20.99■□□□□ 0.95
SSR4-209ENST00000482902 SNW1Q13573 536 aaKnown RBP20.98■□□□□ 0.95
SSR4-209ENST00000482902 WASHC4Q2M389 1173 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 CHMP4CQ96CF2 233 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 L2HGDHQ9H9P8 463 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 CARMIL3Q8ND23 1372 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.98■□□□□ 0.95
SSR4-209ENST00000482902 BMS1Q14692 1282 aaKnown RBP20.98■□□□□ 0.95
SSR4-209ENST00000482902 STX1AQ16623 288 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 LRRFIP1Q32MZ4 808 aaKnown RBP20.98■□□□□ 0.95
SSR4-209ENST00000482902 FILIP1Q7Z7B0 1213 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 ILDR1Q86SU0 546 aaPredicted RBP20.98■□□□□ 0.95
SSR4-209ENST00000482902 XAGE2Q96GT9 111 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 NOL10Q9BSC4 688 aaKnown RBP20.98■□□□□ 0.95
SSR4-209ENST00000482902 ISCA1Q9BUE6 129 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 GPHNQ9NQX3 736 aaPredicted RBP20.98■□□□□ 0.95
SSR4-209ENST00000482902 FHOD1Q9Y613 1164 aa20.98■□□□□ 0.95
SSR4-209ENST00000482902 KINO60870 393 aaKnown RBP20.97■□□□□ 0.95
SSR4-209ENST00000482902 ME1P48163 572 aa20.97■□□□□ 0.95
SSR4-209ENST00000482902 HAND2P61296 217 aa20.97■□□□□ 0.95
SSR4-209ENST00000482902 NKX1-1Q15270 411 aaPredicted RBP20.97■□□□□ 0.95
SSR4-209ENST00000482902 CCDC85AQ96PX6 553 aaPredicted RBP20.97■□□□□ 0.95
SSR4-209ENST00000482902 ZNF330Q9Y3S2 320 aaPredicted RBP20.97■□□□□ 0.95
SSR4-209ENST00000482902 KIF2AO00139 706 aaPredicted RBP20.97■□□□□ 0.95
SSR4-209ENST00000482902 FDPSP14324 419 aaKnown RBP20.97■□□□□ 0.95
SSR4-209ENST00000482902 AKAP2Q9Y2D5 859 aa20.97■□□□□ 0.95
SSR4-209ENST00000482902 FAM160A1Q05DH4 1040 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 TCIRG1Q13488 830 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 FBXL16Q8N461 479 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 FSIP1Q8NA03 581 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 ENGASEQ8NFI3 743 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 FOXP2O15409 715 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 EVCP57679 992 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 IMMTQ16891 758 aaKnown RBP20.96■□□□□ 0.95
SSR4-209ENST00000482902 LRRN4CLQ8ND94 238 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 UBR2Q8IWV8 1755 aa20.96■□□□□ 0.95
SSR4-209ENST00000482902 NPHP1O15259 732 aa20.95■□□□□ 0.94
SSR4-209ENST00000482902 ZFYP08048 801 aaPredicted RBP20.95■□□□□ 0.94
SSR4-209ENST00000482902 ERCC6LQ2NKX8 1250 aa20.95■□□□□ 0.94
SSR4-209ENST00000482902 DHX40Q8IX18 779 aaKnown RBP20.95■□□□□ 0.94
SSR4-209ENST00000482902 SPEF2Q9C093 1822 aa20.95■□□□□ 0.94
SSR4-209ENST00000482902 IL2RBP14784 551 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms