RNA–Protein interactions for RNA: ENST00000482728.1

SMIM4-204, Transcript of small integral membrane protein 4, humanhuman

TSL 2

Gene SMIM4, Length 456 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-204ENST00000482728 DCPSQ96C86 337 aaKnown RBP22.77■■□□□ 1.24
SMIM4-204ENST00000482728 IQSEC3Q9UPP2 1182 aaPredicted RBP22.77■■□□□ 1.24
SMIM4-204ENST00000482728 AKAP2Q9Y2D5 859 aa22.77■■□□□ 1.24
SMIM4-204ENST00000482728 FAM205AQ6ZU69 1335 aa22.77■■□□□ 1.24
SMIM4-204ENST00000482728 PASKQ96RG2 1323 aa22.77■■□□□ 1.24
SMIM4-204ENST00000482728 FKBP1AP62942 108 aaKnown RBP22.76■■□□□ 1.23
SMIM4-204ENST00000482728 HTRA3P83110 453 aa22.76■■□□□ 1.23
SMIM4-204ENST00000482728 TFCP2Q12800 502 aa22.76■■□□□ 1.23
SMIM4-204ENST00000482728 OS9Q13438 667 aaPredicted RBP22.76■■□□□ 1.23
SMIM4-204ENST00000482728 POLA2Q14181 598 aa22.76■■□□□ 1.23
SMIM4-204ENST00000482728 CDC37L1Q7L3B6 337 aa22.76■■□□□ 1.23
SMIM4-204ENST00000482728 SCARF1Q14162 830 aa22.75■■□□□ 1.23
SMIM4-204ENST00000482728 GNL3LQ9NVN8 582 aaKnown RBP22.75■■□□□ 1.23
SMIM4-204ENST00000482728 F8W031 263 aaPredicted RBP22.74■■□□□ 1.23
SMIM4-204ENST00000482728 SURF6O75683 361 aaKnown RBP22.74■■□□□ 1.23
SMIM4-204ENST00000482728 CHAF1AQ13111 956 aaPredicted RBP22.74■■□□□ 1.23
SMIM4-204ENST00000482728 MFSD14BQ5SR56 506 aa22.74■■□□□ 1.23
SMIM4-204ENST00000482728 C20orf194Q5TEA3 1177 aa22.74■■□□□ 1.23
SMIM4-204ENST00000482728 CERS5Q8N5B7 392 aa22.74■■□□□ 1.23
SMIM4-204ENST00000482728 GLIS2Q9BZE0 524 aaPredicted RBP22.74■■□□□ 1.23
SMIM4-204ENST00000482728 TMEM88BA6NKF7 163 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 TRAF5O00463 557 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 TIMM10P62072 90 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 CEP85Q6P2H3 762 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 KRT26Q7Z3Y9 468 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 USP48Q86UV5 1035 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 CREBZFQ9NS37 354 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 ZBTB40Q9NUA8 1239 aa22.73■■□□□ 1.23
SMIM4-204ENST00000482728 SULF1Q8IWU6 871 aa22.72■■□□□ 1.23
SMIM4-204ENST00000482728 TBC1D22AQ8WUA7 517 aa22.72■■□□□ 1.23
SMIM4-204ENST00000482728 NEUROD6Q96NK8 337 aa22.72■■□□□ 1.23
SMIM4-204ENST00000482728 DLGAP5Q15398 846 aa22.71■■□□□ 1.23
SMIM4-204ENST00000482728 GGA3Q9NZ52 723 aa22.71■■□□□ 1.23
SMIM4-204ENST00000482728 A0A1B0GUL7 405 aa22.7■■□□□ 1.22
SMIM4-204ENST00000482728 FMR1Q06787 632 aaKnown RBP eCLIP22.7■■□□□ 1.22
SMIM4-204ENST00000482728 NBPF9Q3BBW0 867 aa22.7■■□□□ 1.22
SMIM4-204ENST00000482728 GORABQ5T7V8 394 aa22.7■■□□□ 1.22
SMIM4-204ENST00000482728 ANGEL2Q5VTE6 544 aaKnown RBP22.7■■□□□ 1.22
SMIM4-204ENST00000482728 RPAP2Q8IXW5 612 aaPredicted RBP22.7■■□□□ 1.22
SMIM4-204ENST00000482728 POLR2AP24928 1970 aaKnown RBP22.7■■□□□ 1.22
SMIM4-204ENST00000482728 ASTN2O75129 1339 aaPredicted RBP22.69■■□□□ 1.22
SMIM4-204ENST00000482728 WNT10BO00744 389 aa22.69■■□□□ 1.22
SMIM4-204ENST00000482728 HMMRO75330 724 aa22.69■■□□□ 1.22
SMIM4-204ENST00000482728 ADORA1P30542 326 aa22.69■■□□□ 1.22
SMIM4-204ENST00000482728 RBM5P52756 815 aaKnown RBP eCLIP22.69■■□□□ 1.22
SMIM4-204ENST00000482728 DNAJC5GQ8N7S2 189 aa22.69■■□□□ 1.22
SMIM4-204ENST00000482728 TTF2Q9UNY4 1162 aaKnown RBP22.69■■□□□ 1.22
SMIM4-204ENST00000482728 NOP58Q9Y2X3 529 aaKnown RBP22.69■■□□□ 1.22
SMIM4-204ENST00000482728 CEP350Q5VT06 3117 aa22.68■■□□□ 1.22
SMIM4-204ENST00000482728 WDR66Q8TBY9 1149 aa22.68■■□□□ 1.22
SMIM4-204ENST00000482728 XAGE2Q96GT9 111 aa22.68■■□□□ 1.22
SMIM4-204ENST00000482728 CELF2O95319 508 aaKnown RBP22.67■■□□□ 1.22
SMIM4-204ENST00000482728 PHKA1P46020 1223 aa22.67■■□□□ 1.22
SMIM4-204ENST00000482728 CFAP100Q494V2 611 aa22.67■■□□□ 1.22
SMIM4-204ENST00000482728 CCDC102BQ68D86 513 aa22.67■■□□□ 1.22
SMIM4-204ENST00000482728 ZNF408Q9H9D4 720 aa22.67■■□□□ 1.22
SMIM4-204ENST00000482728 DENND2AQ9ULE3 1009 aa22.67■■□□□ 1.22
SMIM4-204ENST00000482728 ABT1Q9ULW3 272 aaKnown RBP22.67■■□□□ 1.22
SMIM4-204ENST00000482728 ZNF646O15015 1829 aaPredicted RBP22.66■■□□□ 1.22
SMIM4-204ENST00000482728 ADM5C9JUS6 153 aa22.66■■□□□ 1.22
SMIM4-204ENST00000482728 SEMA3EO15041 775 aa22.66■■□□□ 1.22
SMIM4-204ENST00000482728 RRP1P56182 461 aaKnown RBP22.66■■□□□ 1.22
SMIM4-204ENST00000482728 HSP90AB4PQ58FF6 505 aa22.66■■□□□ 1.22
SMIM4-204ENST00000482728 MTMR14Q8NCE2 650 aa22.66■■□□□ 1.22
SMIM4-204ENST00000482728 KLRG1Q96E93 195 aa22.66■■□□□ 1.22
SMIM4-204ENST00000482728 PITPNM2Q9BZ72 1349 aa22.65■■□□□ 1.22
SMIM4-204ENST00000482728 MYO1BO43795 1136 aa22.65■■□□□ 1.22
SMIM4-204ENST00000482728 CST9Q5W186 159 aa22.65■■□□□ 1.22
SMIM4-204ENST00000482728 GPR108Q9NPR9 543 aa22.65■■□□□ 1.22
SMIM4-204ENST00000482728 SUGT1Q9Y2Z0 365 aa22.65■■□□□ 1.22
SMIM4-204ENST00000482728 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.65■■□□□ 1.22
SMIM4-204ENST00000482728 DLK2Q6UY11 383 aa22.64■■□□□ 1.21
SMIM4-204ENST00000482728 ERC1Q8IUD2 1116 aa22.64■■□□□ 1.21
SMIM4-204ENST00000482728 ZBED3Q96IU2 234 aaPredicted RBP22.64■■□□□ 1.21
SMIM4-204ENST00000482728 MKRN1Q9UHC7 482 aaKnown RBP22.64■■□□□ 1.21
SMIM4-204ENST00000482728 SERPINA10Q9UK55 444 aa22.64■■□□□ 1.21
SMIM4-204ENST00000482728 TNNI3KQ59H18 835 aa22.63■■□□□ 1.21
SMIM4-204ENST00000482728 PRMT6Q96LA8 375 aaPredicted RBP22.63■■□□□ 1.21
SMIM4-204ENST00000482728 EXOC6BQ9Y2D4 811 aa22.63■■□□□ 1.21
SMIM4-204ENST00000482728 FPGT-TNNI3KV9GXZ4 949 aa22.63■■□□□ 1.21
SMIM4-204ENST00000482728 SPDYE2BA6NHP3 402 aa22.62■■□□□ 1.21
SMIM4-204ENST00000482728 SPDYE6P0CI01 402 aa22.62■■□□□ 1.21
SMIM4-204ENST00000482728 HDLBPQ00341 1268 aaKnown RBP22.62■■□□□ 1.21
SMIM4-204ENST00000482728 GRIK5Q16478 980 aa22.62■■□□□ 1.21
SMIM4-204ENST00000482728 APOBEC3FQ8IUX4 373 aaKnown RBP22.62■■□□□ 1.21
SMIM4-204ENST00000482728 TRPM7Q96QT4 1865 aa22.62■■□□□ 1.21
SMIM4-204ENST00000482728 MAST3O60307 1309 aa22.61■■□□□ 1.21
SMIM4-204ENST00000482728 CRKP46108 304 aa22.61■■□□□ 1.21
SMIM4-204ENST00000482728 DEFB115Q30KQ5 88 aa22.61■■□□□ 1.21
SMIM4-204ENST00000482728 SIRT2Q8IXJ6 389 aa22.61■■□□□ 1.21
SMIM4-204ENST00000482728 TEKT1Q969V4 418 aa22.61■■□□□ 1.21
SMIM4-204ENST00000482728 SCAF8Q9UPN6 1271 aaKnown RBP22.61■■□□□ 1.21
SMIM4-204ENST00000482728 PCDHAC2Q9Y5I4 1007 aa22.61■■□□□ 1.21
SMIM4-204ENST00000482728 ZBTB22O15209 634 aa22.6■■□□□ 1.21
SMIM4-204ENST00000482728 LDHBP07195 334 aaKnown RBP22.6■■□□□ 1.21
SMIM4-204ENST00000482728 RASGRF1Q13972 1273 aa22.6■■□□□ 1.21
SMIM4-204ENST00000482728 CCDC158Q5M9N0 1113 aa22.6■■□□□ 1.21
SMIM4-204ENST00000482728 ZGPATQ8N5A5 531 aaKnown RBP22.6■■□□□ 1.21
SMIM4-204ENST00000482728 C2orf69Q8N8R5 385 aa22.6■■□□□ 1.21
SMIM4-204ENST00000482728 CDCA5Q96FF9 252 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms