RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 A0A087WZG4 1122 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 POLR3GO15318 223 aaPredicted RBP16.63■□□□□ 0.25
COL9A2-207ENST00000482722 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 TNNI3KQ59H18 835 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 NBPF11Q86T75 865 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 NEK11Q8NG66 645 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 NEUROD6Q96NK8 337 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 FPGT-TNNI3KV9GXZ4 949 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 EP400Q96L91 3159 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 COL5A2P05997 1499 aaPredicted RBP16.63■□□□□ 0.25
COL9A2-207ENST00000482722 AOPEPQ8N6M6 819 aa16.63■□□□□ 0.25
COL9A2-207ENST00000482722 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.63■□□□□ 0.25
COL9A2-207ENST00000482722 SIPA1L3O60292 1781 aaPredicted RBP16.63■□□□□ 0.25
COL9A2-207ENST00000482722 TAOK2Q9UL54 1235 aa16.62■□□□□ 0.25
COL9A2-207ENST00000482722 MED23Q9ULK4 1368 aa16.62■□□□□ 0.25
COL9A2-207ENST00000482722 GSDMDP57764 484 aa16.62■□□□□ 0.25
COL9A2-207ENST00000482722 PTPN12Q05209 780 aaKnown RBP16.62■□□□□ 0.25
COL9A2-207ENST00000482722 GORABQ5T7V8 394 aa16.62■□□□□ 0.25
COL9A2-207ENST00000482722 ZRANB2O95218 330 aaKnown RBP eCLIP16.61■□□□□ 0.25
COL9A2-207ENST00000482722 NEK1Q96PY6 1258 aa16.61■□□□□ 0.25
COL9A2-207ENST00000482722 CARD10Q9BWT7 1032 aa16.61■□□□□ 0.25
COL9A2-207ENST00000482722 PCDH11XQ9BZA7 1347 aa16.61■□□□□ 0.25
COL9A2-207ENST00000482722 PCDH11YQ9BZA8 1340 aa16.61■□□□□ 0.25
COL9A2-207ENST00000482722 CTAGE5O15320 804 aa16.61■□□□□ 0.25
COL9A2-207ENST00000482722 SCRN1Q12765 414 aa16.61■□□□□ 0.25
COL9A2-207ENST00000482722 OSBPL5Q9H0X9 879 aaPredicted RBP16.61■□□□□ 0.25
COL9A2-207ENST00000482722 COL15A1P39059 1388 aa16.61■□□□□ 0.25
COL9A2-207ENST00000482722 CCT2P78371 535 aaKnown RBP16.6■□□□□ 0.25
COL9A2-207ENST00000482722 SYNE4Q8N205 404 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 OVOS2A0A0G2JMS6 1433 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 USP28Q96RU2 1077 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 TSPYL1Q9H0U9 437 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 ANO10Q9NW15 660 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 ARMCX5Q6P1M9 558 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 TMCO3Q6UWJ1 677 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 LMBR1LQ6UX01 489 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 PIGBQ92521 554 aa16.6■□□□□ 0.25
COL9A2-207ENST00000482722 A0A0G2JLW4 131 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 DNAJC10Q8IXB1 793 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 NCOA5Q9HCD5 579 aaKnown RBP16.59■□□□□ 0.25
COL9A2-207ENST00000482722 HMG20BQ9P0W2 317 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 ORC3Q9UBD5 711 aaPredicted RBP16.59■□□□□ 0.25
COL9A2-207ENST00000482722 KINO60870 393 aaKnown RBP16.59■□□□□ 0.25
COL9A2-207ENST00000482722 CYP21A2P08686 494 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 ATP5JP18859 108 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 ADD1P35611 737 aaKnown RBP16.59■□□□□ 0.25
COL9A2-207ENST00000482722 ME1P48163 572 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 ST5P78524 1137 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 TEX35Q5T0J7 233 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 CCDC73Q6ZRK6 1079 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 CEP57L1Q8IYX8 460 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 ZNF594Q96JF6 807 aaPredicted RBP16.59■□□□□ 0.25
COL9A2-207ENST00000482722 COPRSQ9NQ92 184 aa16.59■□□□□ 0.25
COL9A2-207ENST00000482722 GOLIM4O00461 696 aa16.58■□□□□ 0.25
COL9A2-207ENST00000482722 SEC31AO94979 1220 aaKnown RBP16.58■□□□□ 0.25
COL9A2-207ENST00000482722 CHST3Q7LGC8 479 aa16.58■□□□□ 0.25
COL9A2-207ENST00000482722 TMC6Q7Z403 805 aa16.58■□□□□ 0.25
COL9A2-207ENST00000482722 ALDH8A1Q9H2A2 487 aaPredicted RBP16.58■□□□□ 0.25
COL9A2-207ENST00000482722 RFX5P48382 616 aaPredicted RBP16.58■□□□□ 0.24
COL9A2-207ENST00000482722 UBXN4Q92575 508 aa16.58■□□□□ 0.24
COL9A2-207ENST00000482722 TMOD3Q9NYL9 352 aa16.58■□□□□ 0.24
COL9A2-207ENST00000482722 ZNF609O15014 1411 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 TIMM10P62072 90 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 FSIP1Q8NA03 581 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 ZCCHC17Q9NP64 241 aaKnown RBP16.57■□□□□ 0.24
COL9A2-207ENST00000482722 ARGLU1Q9NWB6 273 aaPredicted RBP16.57■□□□□ 0.24
COL9A2-207ENST00000482722 IMPACTQ9P2X3 320 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 PSDA5PKW4 1024 aaPredicted RBP16.57■□□□□ 0.24
COL9A2-207ENST00000482722 TPM4P67936 248 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 APOBRQ0VD83 1088 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 HOMER1Q86YM7 354 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 SMARCE1Q969G3 411 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 ACSBG1Q96GR2 724 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 XPO4Q9C0E2 1151 aaKnown RBP16.57■□□□□ 0.24
COL9A2-207ENST00000482722 ZSCAN16Q9H4T2 348 aaPredicted RBP16.57■□□□□ 0.24
COL9A2-207ENST00000482722 SNRKQ9NRH2 765 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 DNAI1Q9UI46 699 aa16.57■□□□□ 0.24
COL9A2-207ENST00000482722 SMC2O95347 1197 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 KRT32Q14532 448 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 MCMDC2Q4G0Z9 681 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 KRBA2Q6ZNG9 492 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 RCOR1Q9UKL0 485 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 A0A1B0GVL5 298 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 BIN1O00499 593 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 SFPQP23246 707 aaKnown RBP eCLIP16.56■□□□□ 0.24
COL9A2-207ENST00000482722 TXLNBQ8N3L3 684 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 CCDC150Q8NCX0 1101 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 ENGASEQ8NFI3 743 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 IFNKQ9P0W0 207 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 GPTP24298 496 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 STOX1Q6ZVD7 989 aa16.56■□□□□ 0.24
COL9A2-207ENST00000482722 PTPDC1A2A3K4 754 aa16.55■□□□□ 0.24
COL9A2-207ENST00000482722 FAM160A1Q05DH4 1040 aa16.55■□□□□ 0.24
COL9A2-207ENST00000482722 AEBP2Q6ZN18 517 aaPredicted RBP16.55■□□□□ 0.24
COL9A2-207ENST00000482722 NSUN7Q8NE18 718 aaKnown RBP16.55■□□□□ 0.24
COL9A2-207ENST00000482722 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
COL9A2-207ENST00000482722 CTDNEP1O95476 244 aa16.55■□□□□ 0.24
COL9A2-207ENST00000482722 ETF1P62495 437 aaKnown RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms