RNA–Protein interactions for RNA: ENST00000482714.5

CCM2-215, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,459 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-215ENST00000482714 YDJCA8MPS7 323 aa18.73■□□□□ 0.59
CCM2-215ENST00000482714 VIL1P09327 827 aaKnown RBP18.73■□□□□ 0.59
CCM2-215ENST00000482714 CXCL9Q07325 125 aa18.73■□□□□ 0.59
CCM2-215ENST00000482714 CIAPIN1Q6FI81 312 aa18.73■□□□□ 0.59
CCM2-215ENST00000482714 TLR7Q9NYK1 1049 aaKnown RBP18.73■□□□□ 0.59
CCM2-215ENST00000482714 SUGT1Q9Y2Z0 365 aa18.73■□□□□ 0.59
CCM2-215ENST00000482714 MYO3BQ8WXR4 1341 aa18.72■□□□□ 0.59
CCM2-215ENST00000482714 GLRX3O76003 335 aaKnown RBP18.72■□□□□ 0.59
CCM2-215ENST00000482714 MX1P20591 662 aa18.72■□□□□ 0.59
CCM2-215ENST00000482714 ZGPATQ8N5A5 531 aaKnown RBP18.72■□□□□ 0.59
CCM2-215ENST00000482714 DICER1Q9UPY3 1922 aaKnown RBP18.72■□□□□ 0.59
CCM2-215ENST00000482714 CHD4Q14839 1912 aa18.72■□□□□ 0.59
CCM2-215ENST00000482714 AOX1Q06278 1338 aa18.72■□□□□ 0.59
CCM2-215ENST00000482714 SALL1Q9NSC2 1324 aa18.72■□□□□ 0.59
CCM2-215ENST00000482714 PDE1AP54750 535 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 GTF2IP78347 998 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 GPC2Q8N158 579 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 SPATA5Q8NB90 893 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 HMG20BQ9P0W2 317 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 CCDC88AQ3V6T2 1871 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 RPS12P25398 132 aaKnown RBP18.71■□□□□ 0.59
CCM2-215ENST00000482714 RASGRF1Q13972 1273 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 TMED8Q6PL24 325 aaPredicted RBP18.71■□□□□ 0.59
CCM2-215ENST00000482714 PLEKHM2Q8IWE5 1019 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 AGBL3Q8NEM8 1001 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 GTF3C3Q9Y5Q9 886 aa18.71■□□□□ 0.59
CCM2-215ENST00000482714 MCAMP43121 646 aa18.7■□□□□ 0.58
CCM2-215ENST00000482714 TTF1Q15361 905 aaPredicted RBP18.7■□□□□ 0.58
CCM2-215ENST00000482714 DACT2Q5SW24 774 aa18.7■□□□□ 0.58
CCM2-215ENST00000482714 SPTY2D1Q68D10 685 aaPredicted RBP18.7■□□□□ 0.58
CCM2-215ENST00000482714 TICAM2Q86XR7 235 aa18.7■□□□□ 0.58
CCM2-215ENST00000482714 ZNF784Q8NCA9 323 aaPredicted RBP18.7■□□□□ 0.58
CCM2-215ENST00000482714 DPF2Q92785 391 aa18.7■□□□□ 0.58
CCM2-215ENST00000482714 HAUS7Q99871 368 aa18.7■□□□□ 0.58
CCM2-215ENST00000482714 BCL11AQ9H165 835 aa18.7■□□□□ 0.58
CCM2-215ENST00000482714 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
CCM2-215ENST00000482714 GLTPD2A6NH11 291 aa18.69■□□□□ 0.58
CCM2-215ENST00000482714 RAD17O75943 681 aa18.69■□□□□ 0.58
CCM2-215ENST00000482714 RSBN1LQ6PCB5 846 aaPredicted RBP18.69■□□□□ 0.58
CCM2-215ENST00000482714 MRIQ9BWK5 157 aa18.69■□□□□ 0.58
CCM2-215ENST00000482714 KCNQ5Q9NR82 932 aa18.69■□□□□ 0.58
CCM2-215ENST00000482714 IQSEC3Q9UPP2 1182 aaPredicted RBP18.69■□□□□ 0.58
CCM2-215ENST00000482714 PSMD14O00487 310 aa18.68■□□□□ 0.58
CCM2-215ENST00000482714 BOLA2Q9H3K6 86 aa18.68■□□□□ 0.58
CCM2-215ENST00000482714 COL4A5P29400 1685 aa18.67■□□□□ 0.58
CCM2-215ENST00000482714 MFSD14BQ5SR56 506 aa18.67■□□□□ 0.58
CCM2-215ENST00000482714 PI4K2BQ8TCG2 481 aa18.67■□□□□ 0.58
CCM2-215ENST00000482714 OTUD7AQ8TE49 926 aaPredicted RBP18.67■□□□□ 0.58
CCM2-215ENST00000482714 PDE4AP27815 886 aa18.66■□□□□ 0.58
CCM2-215ENST00000482714 CHAF1AQ13111 956 aaPredicted RBP18.66■□□□□ 0.58
CCM2-215ENST00000482714 SCARF1Q14162 830 aa18.66■□□□□ 0.58
CCM2-215ENST00000482714 GMLQ99445 158 aa18.66■□□□□ 0.58
CCM2-215ENST00000482714 CYP2E1P05181 493 aaPredicted RBP18.65■□□□□ 0.58
CCM2-215ENST00000482714 ZAP70P43403 619 aa18.65■□□□□ 0.58
CCM2-215ENST00000482714 HDLBPQ00341 1268 aaKnown RBP18.65■□□□□ 0.58
CCM2-215ENST00000482714 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
CCM2-215ENST00000482714 OGFOD1Q8N543 542 aa18.65■□□□□ 0.58
CCM2-215ENST00000482714 FBXW7Q969H0 707 aa18.65■□□□□ 0.58
CCM2-215ENST00000482714 L3MBTL3Q96JM7 780 aaPredicted RBP18.65■□□□□ 0.58
CCM2-215ENST00000482714 MAST3O60307 1309 aa18.64■□□□□ 0.57
CCM2-215ENST00000482714 ZNF541Q9H0D2 1346 aa18.64■□□□□ 0.57
CCM2-215ENST00000482714 LDHBP07195 334 aaKnown RBP18.64■□□□□ 0.57
CCM2-215ENST00000482714 LRRFIP1Q32MZ4 808 aaKnown RBP18.64■□□□□ 0.57
CCM2-215ENST00000482714 SLF2Q8IX21 1173 aa18.64■□□□□ 0.57
CCM2-215ENST00000482714 SNRKQ9NRH2 765 aa18.64■□□□□ 0.57
CCM2-215ENST00000482714 PAG1Q9NWQ8 432 aa18.64■□□□□ 0.57
CCM2-215ENST00000482714 HDAC9Q9UKV0 1011 aa18.64■□□□□ 0.57
CCM2-215ENST00000482714 GJA3Q9Y6H8 435 aa18.64■□□□□ 0.57
CCM2-215ENST00000482714 DDNO94850 711 aaPredicted RBP18.63■□□□□ 0.57
CCM2-215ENST00000482714 USP17L8P0C7I0 530 aa18.63■□□□□ 0.57
CCM2-215ENST00000482714 CERS5Q8N5B7 392 aa18.63■□□□□ 0.57
CCM2-215ENST00000482714 EVI5LQ96CN4 794 aa18.63■□□□□ 0.57
CCM2-215ENST00000482714 LRP2BPQ9P2M1 347 aa18.63■□□□□ 0.57
CCM2-215ENST00000482714 ABCF2Q9UG63 623 aa18.63■□□□□ 0.57
CCM2-215ENST00000482714 SCN9AQ15858 1988 aa18.62■□□□□ 0.57
CCM2-215ENST00000482714 H7C1D1 291 aa18.62■□□□□ 0.57
CCM2-215ENST00000482714 MAP3K12Q12852 859 aa18.62■□□□□ 0.57
CCM2-215ENST00000482714 ZSCAN25Q6NSZ9 544 aa18.62■□□□□ 0.57
CCM2-215ENST00000482714 FAM163AQ96GL9 167 aaPredicted RBP18.62■□□□□ 0.57
CCM2-215ENST00000482714 AKAP11Q9UKA4 1901 aa18.61■□□□□ 0.57
CCM2-215ENST00000482714 GOLIM4O00461 696 aa18.61■□□□□ 0.57
CCM2-215ENST00000482714 LDHCP07864 332 aa18.61■□□□□ 0.57
CCM2-215ENST00000482714 GSTO1P78417 241 aa18.61■□□□□ 0.57
CCM2-215ENST00000482714 PI16Q6UXB8 463 aa18.61■□□□□ 0.57
CCM2-215ENST00000482714 DNAJC2Q99543 621 aaKnown RBP18.61■□□□□ 0.57
CCM2-215ENST00000482714 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.61■□□□□ 0.57
CCM2-215ENST00000482714 GPRC5DQ9NZD1 345 aa18.61■□□□□ 0.57
CCM2-215ENST00000482714 CNOT7Q9UIV1 285 aaKnown RBP18.61■□□□□ 0.57
CCM2-215ENST00000482714 ZBTB12Q9Y330 459 aaPredicted RBP18.61■□□□□ 0.57
CCM2-215ENST00000482714 PSME4Q14997 1843 aa18.61■□□□□ 0.57
CCM2-215ENST00000482714 IQCA1LA6NCM1 817 aa18.6■□□□□ 0.57
CCM2-215ENST00000482714 LMOD1P29536 600 aaPredicted RBP18.6■□□□□ 0.57
CCM2-215ENST00000482714 GMPSP49915 693 aaPredicted RBP18.6■□□□□ 0.57
CCM2-215ENST00000482714 ZNF280AP59817 542 aaPredicted RBP18.6■□□□□ 0.57
CCM2-215ENST00000482714 HHIPL2Q6UWX4 724 aa18.6■□□□□ 0.57
CCM2-215ENST00000482714 TBC1D9Q6ZT07 1266 aa18.6■□□□□ 0.57
CCM2-215ENST00000482714 KBTBD3Q8NAB2 608 aa18.6■□□□□ 0.57
CCM2-215ENST00000482714 SERPINA10Q9UK55 444 aa18.6■□□□□ 0.57
CCM2-215ENST00000482714 TTF2Q9UNY4 1162 aaKnown RBP18.6■□□□□ 0.57
CCM2-215ENST00000482714 JAG2Q9Y219 1238 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms