RNA–Protein interactions for RNA: ENST00000482183.1

CAPN8-208, Transcript of calpain 8, human

TSL 2

Gene CAPN8, Length 475 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN8-208	ENST00000482183	PDIA3	P30101	505 aa	Known RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	ADD2	P35612	726 aa		11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	PIP4K2A	P48426	406 aa	Predicted RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	SCRN1	Q12765	414 aa		11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	STK3	Q13188	491 aa		11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	SF3A1	Q15459	793 aa	Known RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	AHDC1	Q5TGY3	1603 aa	Predicted RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	FOXD4L3	Q6VB84	417 aa	Predicted RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	TTC6	Q86TZ1	520 aa		11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	RNF214	Q8ND24	703 aa		11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	NSUN7	Q8NE18	718 aa	Known RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	COL22A1	Q8NFW1	1626 aa	Predicted RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	FUCA2	Q9BTY2	467 aa		11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	UTP14A	Q9BVJ6	771 aa	Known RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	ZNF330	Q9Y3S2	320 aa	Predicted RBP	11.73	□□□□□ -0.53
CAPN8-208	ENST00000482183	ERICH2	A1L162	156 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	UBAP1L	F5GYI3	381 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	ZBTB22	O15209	634 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	GPAA1	O43292	621 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	RRP9	O43818	475 aa	Known RBP	11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	HCLS1	P14317	486 aa	Predicted RBP	11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	CDC25B	P30305	580 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	TYRO3	Q06418	890 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	ST3GAL1	Q11201	340 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	STX1A	Q16623	288 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	ADAL	Q6DHV7	355 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	ZNF34	Q8IZ26	560 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	AIDA	Q96BJ3	306 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	FAM89A	Q96GI7	184 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	C8orf76	Q96K31	380 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	RTEL1	Q9NZ71	1219 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	ANGEL1	Q9UNK9	670 aa	Known RBP	11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	SHANK3	Q9BYB0	1731 aa		11.72	□□□□□ -0.53
CAPN8-208	ENST00000482183	SALL1	Q9NSC2	1324 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	PRC1	O43663	620 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	FGA	P02671	866 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	LIFR	P42702	1097 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	FAM160A1	Q05DH4	1040 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	SAFB	Q15424	915 aa	Known RBP eCLIP	11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	DDB1	Q16531	1140 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	SLC9C2	Q5TAH2	1124 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	PIBF1	Q8WXW3	757 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	JARID2	Q92833	1246 aa	Predicted RBP	11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	EDC3	Q96F86	508 aa	Known RBP	11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	CCDC87	Q9NVE4	849 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	POLR3E	Q9NVU0	708 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	DACT1	Q9NYF0	836 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	ASAP1	Q9ULH1	1129 aa		11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	TNFRSF11A	Q9Y6Q6	616 aa	Predicted RBP	11.71	□□□□□ -0.53
CAPN8-208	ENST00000482183	ANKRD36C	Q5JPF3	1778 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	STK36	Q9NRP7	1315 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	SMTNL1	A8MU46	457 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	BECN2	A8MW95	431 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	PATL2	C9JE40	543 aa	Known RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	DYNC1I1	O14576	645 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	TUBB4A	P04350	444 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	XBP1	P17861	261 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	ZAP70	P43403	619 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	GNL2	Q13823	731 aa	Known RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	DNTTIP2	Q5QJE6	756 aa	Known RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	GIMAP6	Q6P9H5	292 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	CCDC129	Q6ZRS4	1044 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	BARGIN	Q6ZT62	677 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	FERMT3	Q86UX7	667 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	CEP57L1	Q8IYX8	460 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	TDRD7	Q8NHU6	1098 aa	Known RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	OSBP2	Q969R2	916 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	ZNF594	Q96JF6	807 aa	Predicted RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	TIGD1	Q96MW7	591 aa		11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	SEC62	Q99442	399 aa	Known RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	LARP6	Q9BRS8	491 aa	Known RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.7	□□□□□ -0.54
CAPN8-208	ENST00000482183	CIC	Q96RK0	1608 aa	Predicted RBP	11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	SEMA3E	O15041	775 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	APP	P05067	770 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	ME1	P48163	572 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	ZNF165	P49910	485 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	EIF5	P55010	431 aa	Known RBP	11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	APOBR	Q0VD83	1088 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	STK38	Q15208	465 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	SARM1	Q6SZW1	724 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	SGMS1	Q86VZ5	419 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	MB21D2	Q8IYB1	491 aa	Predicted RBP	11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	ELOA2	Q8IYF1	753 aa	Predicted RBP	11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	TRIM22	Q8IYM9	498 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	FBXO18	Q8NFZ0	1043 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	MRPS27	Q92552	414 aa	Known RBP	11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	CEP131	Q9UPN4	1083 aa		11.69	□□□□□ -0.54
CAPN8-208	ENST00000482183	PNPLA7	Q6ZV29	1317 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	KLF18	A0A0U1RQI7	1052 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	GOLGA8B	A8MQT2	603 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183		M0R2C6	588 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	TOM1	O60784	492 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	PPP6R2	O75170	966 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	METAP2	P50579	478 aa	Known RBP eCLIP	11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	RBM6	P78332	1123 aa	Known RBP	11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	CCDC102B	Q68D86	513 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	CERS3	Q8IU89	383 aa		11.68	□□□□□ -0.54
CAPN8-208	ENST00000482183	CCAR1	Q8IX12	1150 aa	Known RBP	11.68	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26 ms