RNA–Protein interactions for RNA: ENST00000481910.1

HPS4-212, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 1,914 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-212ENST00000481910 PDE4AP27815 886 aa14.14□□□□□ -0.15
HPS4-212ENST00000481910 COA1Q9GZY4 146 aa14.14□□□□□ -0.15
HPS4-212ENST00000481910 ECHDC1Q9NTX5 307 aa14.14□□□□□ -0.15
HPS4-212ENST00000481910 GNL3LQ9NVN8 582 aaKnown RBP14.14□□□□□ -0.15
HPS4-212ENST00000481910 FRAT2O75474 233 aaPredicted RBP14.13□□□□□ -0.15
HPS4-212ENST00000481910 SKAP1Q86WV1 359 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 PLEKHM2Q8IWE5 1019 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 DBNDD1Q9H9R9 158 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 CD209Q9NNX6 404 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 IQSEC3Q9UPP2 1182 aaPredicted RBP14.13□□□□□ -0.15
HPS4-212ENST00000481910 CCDC88AQ3V6T2 1871 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 PDE1AP54750 535 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 TSHZ3Q63HK5 1081 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 JDP2Q8WYK2 163 aa14.13□□□□□ -0.15
HPS4-212ENST00000481910 TTC41PQ6P2S7 1318 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 SALL3Q9BXA9 1300 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 UQCRFS1P1P0C7P4 283 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 LMNB1P20700 586 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 RGS3P49796 1198 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 PRELPP51888 382 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 PODNQ7Z5L7 613 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 RBM19Q9Y4C8 960 aaKnown RBP14.12□□□□□ -0.15
HPS4-212ENST00000481910 CHD4Q14839 1912 aa14.12□□□□□ -0.15
HPS4-212ENST00000481910 ERC2O15083 957 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 ECE2O60344 883 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 IL1R1P14778 569 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 ATP5JP18859 108 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 ARID4AP29374 1257 aaPredicted RBP14.11□□□□□ -0.15
HPS4-212ENST00000481910 NIM1KQ8IY84 436 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 TDRD7Q8NHU6 1098 aaKnown RBP14.11□□□□□ -0.15
HPS4-212ENST00000481910 ZNF512BQ96KM6 892 aaPredicted RBP14.11□□□□□ -0.15
HPS4-212ENST00000481910 STAP2Q9UGK3 403 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 SBF1O95248 1867 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 BOLA2Q9H3K6 86 aa14.11□□□□□ -0.15
HPS4-212ENST00000481910 MCAMP43121 646 aa14.1□□□□□ -0.15
HPS4-212ENST00000481910 RASGRF1Q13972 1273 aa14.1□□□□□ -0.15
HPS4-212ENST00000481910 SCARF1Q14162 830 aa14.1□□□□□ -0.15
HPS4-212ENST00000481910 OSBPL3Q9H4L5 887 aa14.1□□□□□ -0.15
HPS4-212ENST00000481910 SEMA3EO15041 775 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 GLRX3O76003 335 aaKnown RBP14.09□□□□□ -0.15
HPS4-212ENST00000481910 PI16Q6UXB8 463 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 SPATA5Q8NB90 893 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 PI4K2BQ8TCG2 481 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 SNRKQ9NRH2 765 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 DENND2AQ9ULE3 1009 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 ZNRF3Q9ULT6 936 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 IPO4Q8TEX9 1081 aaKnown RBP14.09□□□□□ -0.15
HPS4-212ENST00000481910 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.09□□□□□ -0.15
HPS4-212ENST00000481910 KCNQ5Q9NR82 932 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 RNF181Q9P0P0 153 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 HMG20BQ9P0W2 317 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 NAP1L2Q9ULW6 460 aaPredicted RBP14.09□□□□□ -0.15
HPS4-212ENST00000481910 COL4A5P29400 1685 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 MYH13Q9UKX3 1938 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 AOX1Q06278 1338 aa14.09□□□□□ -0.15
HPS4-212ENST00000481910 YDJCA8MPS7 323 aa14.08□□□□□ -0.16
HPS4-212ENST00000481910 GTF2IP78347 998 aa14.08□□□□□ -0.16
HPS4-212ENST00000481910 CHAF1AQ13111 956 aaPredicted RBP14.08□□□□□ -0.16
HPS4-212ENST00000481910 C9orf131Q5VYM1 1079 aa14.08□□□□□ -0.16
HPS4-212ENST00000481910 TTLL5Q6EMB2 1281 aa14.08□□□□□ -0.16
HPS4-212ENST00000481910 FBXW7Q969H0 707 aa14.08□□□□□ -0.16
HPS4-212ENST00000481910 DNAJC2Q99543 621 aaKnown RBP14.08□□□□□ -0.16
HPS4-212ENST00000481910 JAG2Q9Y219 1238 aa14.08□□□□□ -0.16
HPS4-212ENST00000481910 NDUFB9Q9Y6M9 179 aa14.08□□□□□ -0.16
HPS4-212ENST00000481910 ZAP70P43403 619 aa14.07□□□□□ -0.16
HPS4-212ENST00000481910 HAUS7Q99871 368 aa14.07□□□□□ -0.16
HPS4-212ENST00000481910 AKAP11Q9UKA4 1901 aa14.07□□□□□ -0.16
HPS4-212ENST00000481910 DICER1Q9UPY3 1922 aaKnown RBP14.07□□□□□ -0.16
HPS4-212ENST00000481910 VASPP50552 380 aaPredicted RBP14.07□□□□□ -0.16
HPS4-212ENST00000481910 SCN9AQ15858 1988 aa14.06□□□□□ -0.16
HPS4-212ENST00000481910 USP17L3A6NCW0 530 aa14.06□□□□□ -0.16
HPS4-212ENST00000481910 USP17L4A6NCW7 530 aa14.06□□□□□ -0.16
HPS4-212ENST00000481910 FZD9O00144 591 aa14.06□□□□□ -0.16
HPS4-212ENST00000481910 RAD17O75943 681 aa14.06□□□□□ -0.16
HPS4-212ENST00000481910 MAP4K4O95819 1239 aaPredicted RBP14.06□□□□□ -0.16
HPS4-212ENST00000481910 EIF6P56537 245 aaKnown RBP14.06□□□□□ -0.16
HPS4-212ENST00000481910 USP17L1Q7RTZ2 530 aa14.06□□□□□ -0.16
HPS4-212ENST00000481910 WDR66Q8TBY9 1149 aa14.06□□□□□ -0.16
HPS4-212ENST00000481910 COL1A1P02452 1464 aaPredicted RBP14.06□□□□□ -0.16
HPS4-212ENST00000481910 GOLIM4O00461 696 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 CYP2E1P05181 493 aaPredicted RBP14.05□□□□□ -0.16
HPS4-212ENST00000481910 CXCL9Q07325 125 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 TTC22Q5TAA0 569 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 STRIP1Q5VSL9 837 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 TBC1D9Q6ZT07 1266 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 IFNLR1Q8IU57 520 aaPredicted RBP14.05□□□□□ -0.16
HPS4-212ENST00000481910 EDC3Q96F86 508 aaKnown RBP14.05□□□□□ -0.16
HPS4-212ENST00000481910 ARID3AQ99856 593 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 ANTXR1Q9H6X2 564 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 PAG1Q9NWQ8 432 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 ABCF2Q9UG63 623 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 PDS5AQ29RF7 1337 aaKnown RBP14.05□□□□□ -0.16
HPS4-212ENST00000481910 FAM205AQ6ZU69 1335 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 TRIM6-TRIM34B2RNG4 842 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 MFSD14BQ5SR56 506 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 CIAPIN1Q6FI81 312 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 TBC1D22AQ8WUA7 517 aa14.05□□□□□ -0.16
HPS4-212ENST00000481910 PSMD14O00487 310 aa14.04□□□□□ -0.16
HPS4-212ENST00000481910 CHRM1P11229 460 aaPredicted RBP14.04□□□□□ -0.16
HPS4-212ENST00000481910 TNIP1Q15025 636 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms