RNA–Protein interactions for RNA: ENST00000481812.4

VPS16-207, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 943 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-207ENST00000481812 ERC2O15083 957 aa25.32■■□□□ 1.64
VPS16-207ENST00000481812 C9orf131Q5VYM1 1079 aa25.32■■□□□ 1.64
VPS16-207ENST00000481812 TIAM2Q8IVF5 1701 aa25.32■■□□□ 1.64
VPS16-207ENST00000481812 UTRNP46939 3433 aa25.31■■□□□ 1.64
VPS16-207ENST00000481812 YDJCA8MPS7 323 aa25.31■■□□□ 1.64
VPS16-207ENST00000481812 ZNF646O15015 1829 aaPredicted RBP25.3■■□□□ 1.64
VPS16-207ENST00000481812 FRAT2O75474 233 aaPredicted RBP25.3■■□□□ 1.64
VPS16-207ENST00000481812 MCAMP43121 646 aa25.3■■□□□ 1.64
VPS16-207ENST00000481812 RASGRF1Q13972 1273 aa25.3■■□□□ 1.64
VPS16-207ENST00000481812 STRIP1Q5VSL9 837 aa25.3■■□□□ 1.64
VPS16-207ENST00000481812 GLRX3O76003 335 aaKnown RBP25.29■■□□□ 1.64
VPS16-207ENST00000481812 FKBP1AP62942 108 aaKnown RBP25.29■■□□□ 1.64
VPS16-207ENST00000481812 PI4K2BQ8TCG2 481 aa25.29■■□□□ 1.64
VPS16-207ENST00000481812 HMG20BQ9P0W2 317 aa25.29■■□□□ 1.64
VPS16-207ENST00000481812 USP17L3A6NCW0 530 aa25.28■■□□□ 1.64
VPS16-207ENST00000481812 USP17L4A6NCW7 530 aa25.28■■□□□ 1.64
VPS16-207ENST00000481812 EIF6P56537 245 aaKnown RBP25.28■■□□□ 1.64
VPS16-207ENST00000481812 TTLL5Q6EMB2 1281 aa25.28■■□□□ 1.64
VPS16-207ENST00000481812 USP17L1Q7RTZ2 530 aa25.28■■□□□ 1.64
VPS16-207ENST00000481812 SPATA5Q8NB90 893 aa25.28■■□□□ 1.64
VPS16-207ENST00000481812 WDR66Q8TBY9 1149 aa25.28■■□□□ 1.64
VPS16-207ENST00000481812 IQSEC3Q9UPP2 1182 aaPredicted RBP25.28■■□□□ 1.64
VPS16-207ENST00000481812 SCARF1Q14162 830 aa25.27■■□□□ 1.64
VPS16-207ENST00000481812 TNIP1Q15025 636 aa25.27■■□□□ 1.64
VPS16-207ENST00000481812 TBC1D22AQ8WUA7 517 aa25.27■■□□□ 1.64
VPS16-207ENST00000481812 HAUS7Q99871 368 aa25.27■■□□□ 1.64
VPS16-207ENST00000481812 SALL1Q9NSC2 1324 aa25.27■■□□□ 1.64
VPS16-207ENST00000481812 COL1A1P02452 1464 aaPredicted RBP25.27■■□□□ 1.64
VPS16-207ENST00000481812 IGSF3O75054 1194 aa25.26■■□□□ 1.63
VPS16-207ENST00000481812 VIL1P09327 827 aaKnown RBP25.26■■□□□ 1.63
VPS16-207ENST00000481812 GTF2IP78347 998 aa25.26■■□□□ 1.63
VPS16-207ENST00000481812 CXCL9Q07325 125 aa25.26■■□□□ 1.63
VPS16-207ENST00000481812 CIAPIN1Q6FI81 312 aa25.26■■□□□ 1.63
VPS16-207ENST00000481812 KCNQ5Q9NR82 932 aa25.26■■□□□ 1.63
VPS16-207ENST00000481812 ZGPATQ8N5A5 531 aaKnown RBP25.25■■□□□ 1.63
VPS16-207ENST00000481812 BOLA2Q9H3K6 86 aa25.25■■□□□ 1.63
VPS16-207ENST00000481812 MYO3BQ8WXR4 1341 aa25.24■■□□□ 1.63
VPS16-207ENST00000481812 DACT2Q5SW24 774 aa25.24■■□□□ 1.63
VPS16-207ENST00000481812 SUGT1Q9Y2Z0 365 aa25.24■■□□□ 1.63
VPS16-207ENST00000481812 RAD17O75943 681 aa25.23■■□□□ 1.63
VPS16-207ENST00000481812 ZAP70P43403 619 aa25.23■■□□□ 1.63
VPS16-207ENST00000481812 CHAF1AQ13111 956 aaPredicted RBP25.23■■□□□ 1.63
VPS16-207ENST00000481812 TTF1Q15361 905 aaPredicted RBP25.23■■□□□ 1.63
VPS16-207ENST00000481812 TSHZ3Q63HK5 1081 aa25.23■■□□□ 1.63
VPS16-207ENST00000481812 PSMD14O00487 310 aa25.22■■□□□ 1.63
VPS16-207ENST00000481812 CYP2E1P05181 493 aaPredicted RBP25.22■■□□□ 1.63
VPS16-207ENST00000481812 RSBN1LQ6PCB5 846 aaPredicted RBP25.22■■□□□ 1.63
VPS16-207ENST00000481812 PI16Q6UXB8 463 aa25.22■■□□□ 1.63
VPS16-207ENST00000481812 SNRKQ9NRH2 765 aa25.22■■□□□ 1.63
VPS16-207ENST00000481812 DOCK2Q92608 1830 aa25.21■■□□□ 1.63
VPS16-207ENST00000481812 SPTY2D1Q68D10 685 aaPredicted RBP25.21■■□□□ 1.63
VPS16-207ENST00000481812 GPC2Q8N158 579 aa25.21■■□□□ 1.63
VPS16-207ENST00000481812 AGBL3Q8NEM8 1001 aa25.21■■□□□ 1.63
VPS16-207ENST00000481812 PAG1Q9NWQ8 432 aa25.21■■□□□ 1.63
VPS16-207ENST00000481812 ZNF541Q9H0D2 1346 aa25.2■■□□□ 1.62
VPS16-207ENST00000481812 RPS12P25398 132 aaKnown RBP25.2■■□□□ 1.62
VPS16-207ENST00000481812 MMP14P50281 582 aa25.2■■□□□ 1.62
VPS16-207ENST00000481812 MFSD14BQ5SR56 506 aa25.2■■□□□ 1.62
VPS16-207ENST00000481812 DPY19L2Q6NUT2 758 aa25.2■■□□□ 1.62
VPS16-207ENST00000481812 MYO5AQ9Y4I1 1855 aaKnown RBP25.19■■□□□ 1.62
VPS16-207ENST00000481812 TTC22Q5TAA0 569 aa25.19■■□□□ 1.62
VPS16-207ENST00000481812 TMED8Q6PL24 325 aaPredicted RBP25.19■■□□□ 1.62
VPS16-207ENST00000481812 TICAM2Q86XR7 235 aa25.19■■□□□ 1.62
VPS16-207ENST00000481812 FBXW7Q969H0 707 aa25.19■■□□□ 1.62
VPS16-207ENST00000481812 GMLQ99445 158 aa25.19■■□□□ 1.62
VPS16-207ENST00000481812 DNAJC2Q99543 621 aaKnown RBP25.19■■□□□ 1.62
VPS16-207ENST00000481812 CERS5Q8N5B7 392 aa25.18■■□□□ 1.62
VPS16-207ENST00000481812 DPF2Q92785 391 aa25.18■■□□□ 1.62
VPS16-207ENST00000481812 JAG2Q9Y219 1238 aa25.18■■□□□ 1.62
VPS16-207ENST00000481812 GOLIM4O00461 696 aa25.17■■□□□ 1.62
VPS16-207ENST00000481812 RGS3P49796 1198 aa25.17■■□□□ 1.62
VPS16-207ENST00000481812 MYH7P12883 1935 aa25.17■■□□□ 1.62
VPS16-207ENST00000481812 AK9Q5TCS8 1911 aa25.17■■□□□ 1.62
VPS16-207ENST00000481812 GLTPD2A6NH11 291 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 LDHBP07195 334 aaKnown RBP25.16■■□□□ 1.62
VPS16-207ENST00000481812 ERICH6Q7L0X2 663 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 SKAP1Q86WV1 359 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 EVI5LQ96CN4 794 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 MRIQ9BWK5 157 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 ANTXR1Q9H6X2 564 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 ABCF2Q9UG63 623 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 NDUFB9Q9Y6M9 179 aa25.16■■□□□ 1.62
VPS16-207ENST00000481812 TBC1D9Q6ZT07 1266 aa25.15■■□□□ 1.62
VPS16-207ENST00000481812 KBTBD3Q8NAB2 608 aa25.15■■□□□ 1.62
VPS16-207ENST00000481812 PIH1D3Q9NQM4 214 aaKnown RBP25.15■■□□□ 1.62
VPS16-207ENST00000481812 LRP2BPQ9P2M1 347 aa25.15■■□□□ 1.62
VPS16-207ENST00000481812 GJA3Q9Y6H8 435 aa25.15■■□□□ 1.62
VPS16-207ENST00000481812 MAST3O60307 1309 aa25.14■■□□□ 1.62
VPS16-207ENST00000481812 MAST2Q6P0Q8 1798 aa25.14■■□□□ 1.62
VPS16-207ENST00000481812 PRDX5P30044 214 aa25.14■■□□□ 1.62
VPS16-207ENST00000481812 CNTROBQ8N137 903 aa25.14■■□□□ 1.62
VPS16-207ENST00000481812 EDC3Q96F86 508 aaKnown RBP25.14■■□□□ 1.62
VPS16-207ENST00000481812 MXD3Q9BW11 206 aa25.14■■□□□ 1.62
VPS16-207ENST00000481812 DDNO94850 711 aaPredicted RBP25.13■■□□□ 1.61
VPS16-207ENST00000481812 GSPT1P15170 499 aaKnown RBP25.13■■□□□ 1.61
VPS16-207ENST00000481812 HDLBPQ00341 1268 aaKnown RBP25.13■■□□□ 1.61
VPS16-207ENST00000481812 MAP3K12Q12852 859 aa25.13■■□□□ 1.61
VPS16-207ENST00000481812 BMP2KLQ5H9B9 411 aa25.13■■□□□ 1.61
VPS16-207ENST00000481812 L3MBTL3Q96JM7 780 aaPredicted RBP25.13■■□□□ 1.61
VPS16-207ENST00000481812 ZBTB12Q9Y330 459 aaPredicted RBP25.13■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms