RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 GRAPLQ8TC17 118 aaPredicted RBP5.35□□□□□ -1.55
VPS13D-208ENST00000481484 XAGE3Q8WTP9 111 aa5.35□□□□□ -1.55
VPS13D-208ENST00000481484 CHPF2Q9P2E5 772 aa5.35□□□□□ -1.55
VPS13D-208ENST00000481484 PCDHB3Q9Y5E6 796 aa5.35□□□□□ -1.55
VPS13D-208ENST00000481484 PAPPA2Q9BXP8 1791 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 RTL9Q8NET4 1388 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 IL16Q14005 1332 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 TMEM88BA6NKF7 163 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 CFHP08603 1231 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 ZNF853P0CG23 659 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 COPS2P61201 443 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 TNIP1Q15025 636 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 CCDC27Q2M243 656 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 PROSER3Q2NL68 480 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 KMT5BQ4FZB7 885 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 USP50Q70EL3 339 aaPredicted RBP5.34□□□□□ -1.55
VPS13D-208ENST00000481484 COPS6Q7L5N1 327 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 CCDC146Q8IYE0 955 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 NGEFQ8N5V2 710 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 NKX2-3Q8TAU0 364 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 AIDAQ96BJ3 306 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 EYA3Q99504 573 aa5.34□□□□□ -1.55
VPS13D-208ENST00000481484 ADARB2Q9NS39 739 aaKnown RBP5.34□□□□□ -1.55
VPS13D-208ENST00000481484 TRMT112Q9UI30 125 aaKnown RBP5.34□□□□□ -1.55
VPS13D-208ENST00000481484 POLR2AP24928 1970 aaKnown RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 MYH13Q9UKX3 1938 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 RASSF10A6NK89 507 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 HSPA1AP0DMV8 641 aaKnown RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 HSPA1BP0DMV9 641 aaKnown RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 RPS12P25398 132 aaKnown RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 ECE1P42892 770 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 SCNN1DP51172 638 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 SF3B3Q15393 1217 aaKnown RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 NEUROD2Q15784 382 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 EAPPQ56P03 285 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 CCDC30Q5VVM6 783 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 DUSP27Q5VZP5 1158 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 PPP1R18Q6NYC8 613 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 BLOC1S3Q6QNY0 202 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 SP8Q8IXZ3 490 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 MPNDQ8N594 471 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 ZBTB38Q8NAP3 1195 aaPredicted RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 CCDC191Q8NCU4 936 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 ZC3H15Q8WU90 426 aaKnown RBP5.33□□□□□ -1.56
VPS13D-208ENST00000481484 NLRP7Q8WX94 980 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 ISCA1Q9BUE6 129 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 STK31Q9BXU1 1019 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 MBIPQ9NS73 344 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 ZNRF3Q9ULT6 936 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 ADAMTS8Q9UP79 889 aa5.33□□□□□ -1.56
VPS13D-208ENST00000481484 COL1A1P02452 1464 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-208ENST00000481484 CA12O43570 354 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 ANXA1P04083 346 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 PCCAP05165 728 aaPredicted RBP5.32□□□□□ -1.56
VPS13D-208ENST00000481484 MMP14P50281 582 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 NEXNQ0ZGT2 675 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 AIMP1Q12904 312 aaKnown RBP5.32□□□□□ -1.56
VPS13D-208ENST00000481484 AOC3Q16853 763 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 CCDC152Q4G0S7 254 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 CIAPIN1Q6FI81 312 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 SULF1Q8IWU6 871 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 HHIPL1Q96JK4 782 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 TMUB1Q9BVT8 246 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 PRDM10Q9NQV6 1147 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.32□□□□□ -1.56
VPS13D-208ENST00000481484 PODXL2Q9NZ53 605 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 GPRC5DQ9NZD1 345 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 LAS1LQ9Y4W2 734 aaKnown RBP5.32□□□□□ -1.56
VPS13D-208ENST00000481484 GJA3Q9Y6H8 435 aa5.32□□□□□ -1.56
VPS13D-208ENST00000481484 MED23Q9ULK4 1368 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 COL4A1P02462 1669 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 XDHP47989 1333 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 DDX11L8A8MPP1 907 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 IRS4O14654 1257 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-208ENST00000481484 APAF1O14727 1248 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 HCLS1P14317 486 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-208ENST00000481484 GCGRP47871 477 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 CTCFP49711 727 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-208ENST00000481484 HTRA3P83110 453 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 MAP2K1Q02750 393 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-208ENST00000481484 OLFM4Q6UX06 510 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 RIC3Q7Z5B4 369 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 SCUBE3Q8IX30 993 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 TNS4Q8IZW8 715 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 CNTROBQ8N137 903 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 DPF2Q92785 391 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 CDC5LQ99459 802 aaKnown RBP5.31□□□□□ -1.56
VPS13D-208ENST00000481484 BCL2L13Q9BXK5 485 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 MYH16Q9H6N6 1097 aa5.31□□□□□ -1.56
VPS13D-208ENST00000481484 CWC25Q9NXE8 425 aaPredicted RBP5.31□□□□□ -1.56
VPS13D-208ENST00000481484 ABT1Q9ULW3 272 aaKnown RBP5.31□□□□□ -1.56
VPS13D-208ENST00000481484 MYO3BQ8WXR4 1341 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 H7C1D1 291 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 PDE8AO60658 829 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 NR1I2O75469 434 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 ZMYND10O75800 440 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 GMPSP49915 693 aaPredicted RBP5.3□□□□□ -1.56
VPS13D-208ENST00000481484 CXCL9Q07325 125 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 KRT24Q2M2I5 525 aa5.3□□□□□ -1.56
VPS13D-208ENST00000481484 WASHC4Q2M389 1173 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms