RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 METTL16Q86W50 562 aaKnown RBP14.08□□□□□ -0.16
CUL3-209ENST00000481135 M0R082 166 aa14.07□□□□□ -0.16
CUL3-209ENST00000481135 ALBP02768 609 aa14.07□□□□□ -0.16
CUL3-209ENST00000481135 CELA2BP08218 269 aaPredicted RBP14.07□□□□□ -0.16
CUL3-209ENST00000481135 PPP2R3AQ06190 1150 aa14.07□□□□□ -0.16
CUL3-209ENST00000481135 TPTE2Q6XPS3 522 aa14.07□□□□□ -0.16
CUL3-209ENST00000481135 ZNF417Q8TAU3 575 aa14.07□□□□□ -0.16
CUL3-209ENST00000481135 DDX54Q8TDD1 881 aaKnown RBP14.07□□□□□ -0.16
CUL3-209ENST00000481135 ZNF775Q96BV0 537 aaPredicted RBP14.07□□□□□ -0.16
CUL3-209ENST00000481135 ZNF587Q96SQ5 575 aaPredicted RBP14.07□□□□□ -0.16
CUL3-209ENST00000481135 ENAMQ9NRM1 1142 aa14.07□□□□□ -0.16
CUL3-209ENST00000481135 GPN3Q9UHW5 284 aaPredicted RBP14.07□□□□□ -0.16
CUL3-209ENST00000481135 PCDH1Q08174 1060 aa14.06□□□□□ -0.16
CUL3-209ENST00000481135 PWP1Q13610 501 aa14.06□□□□□ -0.16
CUL3-209ENST00000481135 FAM117BQ6P1L5 589 aa14.06□□□□□ -0.16
CUL3-209ENST00000481135 TREML4Q6UXN2 200 aa14.06□□□□□ -0.16
CUL3-209ENST00000481135 IL22RA1Q8N6P7 574 aa14.06□□□□□ -0.16
CUL3-209ENST00000481135 EIF4EBP3O60516 100 aaPredicted RBP14.05□□□□□ -0.16
CUL3-209ENST00000481135 SEC31BQ9NQW1 1179 aa14.05□□□□□ -0.16
CUL3-209ENST00000481135 PPME1Q9Y570 386 aa14.05□□□□□ -0.16
CUL3-209ENST00000481135 FBXO24O75426 580 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 AFF1P51825 1210 aaKnown RBP14.04□□□□□ -0.16
CUL3-209ENST00000481135 IKBKEQ14164 716 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 LYPD4Q6UWN0 246 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 VN1R5Q7Z5H4 357 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 TGIF2Q9GZN2 237 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 PRDM6Q9NQX0 595 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 SH2B1Q9NRF2 756 aaPredicted RBP14.04□□□□□ -0.16
CUL3-209ENST00000481135 TMEM39AQ9NV64 488 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 SAMM50Q9Y512 469 aa14.04□□□□□ -0.16
CUL3-209ENST00000481135 H3BRJ5 948 aa14.03□□□□□ -0.16
CUL3-209ENST00000481135 GRIK5Q16478 980 aa14.03□□□□□ -0.16
CUL3-209ENST00000481135 USP48Q86UV5 1035 aa14.03□□□□□ -0.16
CUL3-209ENST00000481135 WFDC8Q8IUA0 241 aa14.03□□□□□ -0.16
CUL3-209ENST00000481135 RELL1Q8IUW5 271 aa14.03□□□□□ -0.16
CUL3-209ENST00000481135 NECAB3Q96P71 396 aaPredicted RBP14.03□□□□□ -0.16
CUL3-209ENST00000481135 SHISA8B8ZZ34 492 aa14.02□□□□□ -0.17
CUL3-209ENST00000481135 ARL4DP49703 201 aa14.02□□□□□ -0.17
CUL3-209ENST00000481135 RSRP1Q9BUV0 290 aa14.02□□□□□ -0.17
CUL3-209ENST00000481135 CCSER2Q9H7U1 834 aa14.02□□□□□ -0.17
CUL3-209ENST00000481135 B3GALT4O96024 378 aa14.01□□□□□ -0.17
CUL3-209ENST00000481135 ZC3H6P61129 1189 aaKnown RBP14.01□□□□□ -0.17
CUL3-209ENST00000481135 ZNF654Q8IZM8 581 aa14.01□□□□□ -0.17
CUL3-209ENST00000481135 NEDD1Q8NHV4 660 aa14.01□□□□□ -0.17
CUL3-209ENST00000481135 ESRRAP11474 423 aaPredicted RBP14□□□□□ -0.17
CUL3-209ENST00000481135 EPHA1P21709 976 aa14□□□□□ -0.17
CUL3-209ENST00000481135 FAAP100Q0VG06 881 aa14□□□□□ -0.17
CUL3-209ENST00000481135 MSL1Q68DK7 614 aa14□□□□□ -0.17
CUL3-209ENST00000481135 ADAMTSL4Q6UY14 1074 aa14□□□□□ -0.17
CUL3-209ENST00000481135 ERMP1Q7Z2K6 904 aa14□□□□□ -0.17
CUL3-209ENST00000481135 LCE2CQ5TA81 110 aa13.99□□□□□ -0.17
CUL3-209ENST00000481135 SVOPQ8N4V2 548 aa13.99□□□□□ -0.17
CUL3-209ENST00000481135 WNT8BQ93098 351 aa13.99□□□□□ -0.17
CUL3-209ENST00000481135 C8orf37Q96NL8 207 aa13.99□□□□□ -0.17
CUL3-209ENST00000481135 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.99□□□□□ -0.17
CUL3-209ENST00000481135 PIP4K2BP78356 416 aa13.98□□□□□ -0.17
CUL3-209ENST00000481135 ZNF423Q2M1K9 1284 aa13.98□□□□□ -0.17
CUL3-209ENST00000481135 SOX17Q9H6I2 414 aaPredicted RBP13.98□□□□□ -0.17
CUL3-209ENST00000481135 RRAGCQ9HB90 399 aa13.98□□□□□ -0.17
CUL3-209ENST00000481135 DDX41Q9UJV9 622 aaKnown RBP13.98□□□□□ -0.17
CUL3-209ENST00000481135 ENC1O14682 589 aa13.97□□□□□ -0.17
CUL3-209ENST00000481135 CELA3AP09093 270 aa13.97□□□□□ -0.17
CUL3-209ENST00000481135 CDC25BP30305 580 aa13.97□□□□□ -0.17
CUL3-209ENST00000481135 ZNF157P51786 506 aaPredicted RBP13.97□□□□□ -0.17
CUL3-209ENST00000481135 RAD51AP2Q09MP3 1159 aa13.97□□□□□ -0.17
CUL3-209ENST00000481135 C8orf86Q6ZUL3 223 aa13.97□□□□□ -0.17
CUL3-209ENST00000481135 LMNB1P20700 586 aa13.96□□□□□ -0.17
CUL3-209ENST00000481135 BAG6P46379 1132 aa13.96□□□□□ -0.17
CUL3-209ENST00000481135 ZNF394Q53GI3 561 aa13.96□□□□□ -0.17
CUL3-209ENST00000481135 MAP4K3Q8IVH8 894 aa13.96□□□□□ -0.17
CUL3-209ENST00000481135 SRA1Q9HD15 236 aaKnown RBP13.96□□□□□ -0.17
CUL3-209ENST00000481135 OSGEPQ9NPF4 335 aa13.96□□□□□ -0.17
CUL3-209ENST00000481135 KBTBD4Q9NVX7 518 aa13.96□□□□□ -0.17
CUL3-209ENST00000481135 LINC01387J3KSC0 135 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 SOX1O00570 391 aaPredicted RBP13.95□□□□□ -0.18
CUL3-209ENST00000481135 GBP2P32456 591 aaPredicted RBP13.95□□□□□ -0.18
CUL3-209ENST00000481135 LIG3P49916 1009 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 C19orf57Q0VDD7 668 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 MAP3K11Q16584 847 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 TTBK2Q6IQ55 1244 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 DCAF11Q8TEB1 546 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 WHAMMQ8TF30 809 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 SLC7A3Q8WY07 619 aa13.95□□□□□ -0.18
CUL3-209ENST00000481135 NME2P22392 152 aa13.94□□□□□ -0.18
CUL3-209ENST00000481135 RPS26P62854 115 aaKnown RBP13.94□□□□□ -0.18
CUL3-209ENST00000481135 GNL2Q13823 731 aaKnown RBP13.94□□□□□ -0.18
CUL3-209ENST00000481135 ZNF385CQ66K41 422 aaPredicted RBP13.94□□□□□ -0.18
CUL3-209ENST00000481135 TMEM74Q96NL1 305 aa13.94□□□□□ -0.18
CUL3-209ENST00000481135 EMILIN2Q9BXX0 1053 aa13.94□□□□□ -0.18
CUL3-209ENST00000481135 PCDHGB7Q9Y5F8 929 aa13.94□□□□□ -0.18
CUL3-209ENST00000481135 PIK3R2O00459 728 aa13.93□□□□□ -0.18
CUL3-209ENST00000481135 DGKGP49619 791 aa13.93□□□□□ -0.18
CUL3-209ENST00000481135 AP3B2Q13367 1082 aa13.93□□□□□ -0.18
CUL3-209ENST00000481135 LRRC14Q15048 493 aa13.93□□□□□ -0.18
CUL3-209ENST00000481135 DIEXFQ68CQ4 756 aaKnown RBP13.93□□□□□ -0.18
CUL3-209ENST00000481135 TRIM56Q9BRZ2 755 aaKnown RBP13.93□□□□□ -0.18
CUL3-209ENST00000481135 COPRSQ9NQ92 184 aa13.93□□□□□ -0.18
CUL3-209ENST00000481135 FSCN2O14926 492 aa13.92□□□□□ -0.18
CUL3-209ENST00000481135 NID1P14543 1247 aa13.92□□□□□ -0.18
CUL3-209ENST00000481135 GSTM4Q03013 218 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms