RNA–Protein interactions for RNA: ENST00000480835.1

SNRNP200-205, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 2

Gene SNRNP200, Length 540 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-205ENST00000480835 ATF5Q9Y2D1 282 aaPredicted RBP17.81■□□□□ 0.44
SNRNP200-205ENST00000480835 DUOX1Q9NRD9 1551 aa17.81■□□□□ 0.44
SNRNP200-205ENST00000480835 CCDC171Q6TFL3 1326 aa17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 C6orf229H3BNL8 230 aa17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 ADD2P35612 726 aa17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 UBE3CQ15386 1083 aa17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 DPP8Q6V1X1 898 aaPredicted RBP17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 TDRD7Q8NHU6 1098 aaKnown RBP17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 EYA3Q99504 573 aa17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 POLLQ9UGP5 575 aa17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 CCDC88AQ3V6T2 1871 aa17.8■□□□□ 0.44
SNRNP200-205ENST00000480835 KIAA1551Q9HCM1 1747 aa17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 IDH1O75874 414 aaKnown RBP17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 ANAPC15P60006 121 aa17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 SLC9C2Q5TAH2 1124 aa17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 TXNRD3Q86VQ6 643 aa17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 ZGPATQ8N5A5 531 aaKnown RBP17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 TTLL6Q8N841 843 aa17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 IL27Q8NEV9 243 aa17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 IQSEC3Q9UPP2 1182 aaPredicted RBP17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 COL1A1P02452 1464 aaPredicted RBP17.79■□□□□ 0.44
SNRNP200-205ENST00000480835 PDE6AP16499 860 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 HSPA4P34932 840 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 WDR66Q8TBY9 1149 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 C7orf43Q8WVR3 580 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 MAP4K1Q92918 833 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 IL17RAQ96F46 866 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 SGIP1Q9BQI5 828 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 LRP2BPQ9P2M1 347 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 MAST2Q6P0Q8 1798 aa17.78■□□□□ 0.44
SNRNP200-205ENST00000480835 MAST3O60307 1309 aa17.77■□□□□ 0.44
SNRNP200-205ENST00000480835 SALL1Q9NSC2 1324 aa17.77■□□□□ 0.44
SNRNP200-205ENST00000480835 IL1R1P14778 569 aa17.77■□□□□ 0.44
SNRNP200-205ENST00000480835 SPTY2D1Q68D10 685 aaPredicted RBP17.77■□□□□ 0.44
SNRNP200-205ENST00000480835 ZNF589Q86UQ0 364 aaPredicted RBP17.77■□□□□ 0.44
SNRNP200-205ENST00000480835 COA1Q9GZY4 146 aa17.77■□□□□ 0.44
SNRNP200-205ENST00000480835 CD209Q9NNX6 404 aa17.77■□□□□ 0.44
SNRNP200-205ENST00000480835 PSDA5PKW4 1024 aaPredicted RBP17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 DPEP1P16444 411 aa17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 PTH1RQ03431 593 aa17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 RABEP1Q15276 862 aa17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 SUPT20HQ8NEM7 779 aa17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 OSBP2Q969R2 916 aa17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 IPO9Q96P70 1041 aaKnown RBP17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 SEC62Q99442 399 aaKnown RBP17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 DSCC1Q9BVC3 393 aa17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 RTFDC1Q9BY42 306 aaPredicted RBP17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 ZC3H12CQ9C0D7 883 aaKnown RBP17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 CD2APQ9Y5K6 639 aa17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 U3KPZ7 1027 aaPredicted RBP17.76■□□□□ 0.43
SNRNP200-205ENST00000480835 TCRBV5S4A2TA0A5A2 114 aa17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 KCNA3P22001 575 aa17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 SOGA3Q5TF21 947 aa17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 ERICH6Q7L0X2 663 aa17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 GPR101Q96P66 508 aaPredicted RBP17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 KIF2CQ99661 725 aa17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 WWC3Q9ULE0 1092 aa17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 BRCA1P38398 1863 aaKnown RBP17.75■□□□□ 0.43
SNRNP200-205ENST00000480835 ZNF532Q9HCE3 1301 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 SNED1Q8TER0 1413 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 A0A0G2JLW4 131 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 M0R2C6 588 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 CHGBP05060 677 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 CHAF1AQ13111 956 aaPredicted RBP17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 BECN1Q14457 450 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 CCDC93Q567U6 631 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 RNF20Q5VTR2 975 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 MAGEB6Q8N7X4 407 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 KCNB2Q92953 911 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 RAI14Q9P0K7 980 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 PIM2Q9P1W9 311 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 ABCF2Q9UG63 623 aa17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 RBM8AQ9Y5S9 174 aaKnown RBP17.74■□□□□ 0.43
SNRNP200-205ENST00000480835 PTGER2P43116 358 aa17.73■□□□□ 0.43
SNRNP200-205ENST00000480835 NECTIN1Q15223 517 aa17.73■□□□□ 0.43
SNRNP200-205ENST00000480835 OLFM4Q6UX06 510 aa17.73■□□□□ 0.43
SNRNP200-205ENST00000480835 CCDC129Q6ZRS4 1044 aa17.73■□□□□ 0.43
SNRNP200-205ENST00000480835 RTKN2Q8IZC4 609 aa17.73■□□□□ 0.43
SNRNP200-205ENST00000480835 TBC1D22AQ8WUA7 517 aa17.73■□□□□ 0.43
SNRNP200-205ENST00000480835 FAM205AQ6ZU69 1335 aa17.72■□□□□ 0.43
SNRNP200-205ENST00000480835 CHD4Q14839 1912 aa17.72■□□□□ 0.43
SNRNP200-205ENST00000480835 SLFNL1Q499Z3 407 aa17.72■□□□□ 0.43
SNRNP200-205ENST00000480835 PUS7LQ9H0K6 701 aaKnown RBP17.72■□□□□ 0.43
SNRNP200-205ENST00000480835 G3V3G9 751 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 RIMBP2O15034 1052 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 GPAA1O43292 621 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 HSPD1P10809 573 aaKnown RBP17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 ZKSCAN1P17029 563 aaPredicted RBP17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 CYP7A1P22680 504 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 DCAF8Q5TAQ9 597 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 NAA16Q6N069 864 aaPredicted RBP17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 SNX21Q969T3 373 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 AIDAQ96BJ3 306 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 SPON1Q9HCB6 807 aa17.71■□□□□ 0.43
SNRNP200-205ENST00000480835 RPAP1Q9BWH6 1393 aaPredicted RBP17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 C21orf2O43822 256 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 LDHBP07195 334 aaKnown RBP17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 GNAT2P19087 354 aa17.7■□□□□ 0.42
SNRNP200-205ENST00000480835 CREB3L3Q68CJ9 461 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms