RNA–Protein interactions for RNA: ENST00000480793.1

R3HDM1-214, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 235 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-214ENST00000480793 CDPF1Q6NVV7 123 aa4.73□□□□□ -1.65
R3HDM1-214ENST00000480793 NCAPG2Q86XI2 1143 aa4.73□□□□□ -1.65
R3HDM1-214ENST00000480793 GLIS3Q8NEA6 775 aa4.73□□□□□ -1.65
R3HDM1-214ENST00000480793 POP1Q99575 1024 aaKnown RBP4.73□□□□□ -1.65
R3HDM1-214ENST00000480793 FAM13BQ9NYF5 915 aa4.73□□□□□ -1.65
R3HDM1-214ENST00000480793 LRFN2Q9ULH4 789 aa4.73□□□□□ -1.65
R3HDM1-214ENST00000480793 LRRC10BA6NIK2 292 aa4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 SIAH1Q8IUQ4 282 aa4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 LRRC56Q8IYG6 542 aaPredicted RBP4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 MISP3Q96FF7 219 aa4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 PPP1R16BQ96T49 567 aa4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 USP26Q9BXU7 913 aa4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 LMCD1Q9NZU5 365 aa4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 RAPGEFL1Q9UHV5 662 aa4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 FNDC3AQ9Y2H6 1198 aaKnown RBP4.72□□□□□ -1.65
R3HDM1-214ENST00000480793 ZSCAN22P10073 491 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 MAP7Q14244 749 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 CRTC2Q53ET0 693 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 LCNL1Q6ZST4 164 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 ZNF765Q7L2R6 523 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 SPRED2Q7Z698 418 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 CILP2Q8IUL8 1156 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 CEP120Q8N960 986 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 ADAMTS19Q8TE59 1207 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 PIK3R5Q8WYR1 880 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 EZH1Q92800 747 aaPredicted RBP4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 GATA6Q92908 595 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 FAM53CQ9NYF3 392 aa4.71□□□□□ -1.66
R3HDM1-214ENST00000480793 TSPAN15O95858 294 aa4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 RNASE1P07998 156 aaKnown RBP4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 DRD2P14416 443 aa4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 FUT4P22083 530 aa4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 WEE1P30291 646 aa4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 TTLL10Q6ZVT0 673 aa4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 C1QL4Q86Z23 238 aa4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 WFDC3Q8IUB2 231 aa4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 C2CD4AQ8NCU7 369 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 ABI2Q9NYB9 513 aaPredicted RBP4.7□□□□□ -1.66
R3HDM1-214ENST00000480793 LOC100289279A0A1B0GTE1 492 aa4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 A6NJR5 290 aa4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 POM121CA8CG34 1229 aa4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 BRD2P25440 801 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 EXOSC6Q5RKV6 272 aaKnown RBP4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 HDGFL1Q5TGJ6 251 aa4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 ANKLE2Q86XL3 938 aa4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 PI4K2BQ8TCG2 481 aa4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 BCANQ96GW7 911 aa4.69□□□□□ -1.66
R3HDM1-214ENST00000480793 CYP2E1P05181 493 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 RAB6AP20340 208 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 SOX4Q06945 474 aaPredicted RBP4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 BNIP3Q12983 259 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 PTK7Q13308 1070 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 MLANAQ16655 118 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 COX20Q5RI15 118 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 ANKMY2Q8IV38 441 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 ETFBKMTQ8IXQ9 262 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 LRRN4CLQ8ND94 238 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 MBNL3Q9NUK0 354 aaKnown RBP4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 JAG2Q9Y219 1238 aa4.68□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L15C9J2P7 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L10C9JJH3 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L13C9JLJ4 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L12C9JPN9 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L11C9JVI0 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L21D6R901 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L18D6R9N7 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L22D6RA61 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L17D6RBQ6 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L19D6RCP7 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L20D6RJB6 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 RAD21O60216 631 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 CD8BP10966 210 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 USP17L24Q0WX57 530 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 IKBKEQ14164 716 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 HGSNATQ68CP4 663 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 ADAMTS6Q9UKP5 1117 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 SOX13Q9UN79 622 aa4.67□□□□□ -1.66
R3HDM1-214ENST00000480793 FAM196BA6NMK8 535 aa4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 PDE2AO00408 941 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 NFICP08651 508 aa4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 KCNMB1Q16558 191 aa4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 ECM1Q16610 540 aa4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 ZSWIM9Q86XI8 627 aa4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 KANSL3Q9P2N6 904 aa4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 MAFBQ9Y5Q3 323 aaPredicted RBP4.66□□□□□ -1.66
R3HDM1-214ENST00000480793 SOX1O00570 391 aaPredicted RBP4.65□□□□□ -1.67
R3HDM1-214ENST00000480793 ADH5P11766 374 aa4.65□□□□□ -1.67
R3HDM1-214ENST00000480793 CTSWP56202 376 aa4.65□□□□□ -1.67
R3HDM1-214ENST00000480793 CYP27C1Q4G0S4 372 aa4.65□□□□□ -1.67
R3HDM1-214ENST00000480793 NETO1Q8TDF5 533 aa4.65□□□□□ -1.67
R3HDM1-214ENST00000480793 KRTAP9-8Q9BYQ0 159 aa4.65□□□□□ -1.67
R3HDM1-214ENST00000480793 ACTL7BQ9Y614 415 aa4.65□□□□□ -1.67
R3HDM1-214ENST00000480793 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-214ENST00000480793 DLGAP3O95886 979 aa4.64□□□□□ -1.67
R3HDM1-214ENST00000480793 INHBBP09529 407 aa4.64□□□□□ -1.67
R3HDM1-214ENST00000480793 OGFOD3Q6PK18 319 aa4.64□□□□□ -1.67
R3HDM1-214ENST00000480793 SYDE1Q6ZW31 735 aaPredicted RBP4.64□□□□□ -1.67
R3HDM1-214ENST00000480793 FLAD1Q8NFF5 587 aa4.64□□□□□ -1.67
R3HDM1-214ENST00000480793 POM121Q96HA1 1249 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms