RNA–Protein interactions for RNA: ENST00000480321.1

MCF2L-225, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 5,727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-225ENST00000480321 SPATA24Q86W54 205 aa15.44■□□□□ 0.06
MCF2L-225ENST00000480321 HELLSQ9NRZ9 838 aa15.44■□□□□ 0.06
MCF2L-225ENST00000480321 KIF4AO95239 1232 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 CAPN2P17655 700 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 CYP7A1P22680 504 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 KRT2P35908 639 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 PLCD3Q8N3E9 789 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 PUF60Q9UHX1 559 aaKnown RBP15.43■□□□□ 0.06
MCF2L-225ENST00000480321 COL17A1Q9UMD9 1497 aaPredicted RBP15.43■□□□□ 0.06
MCF2L-225ENST00000480321 FAM160A1Q05DH4 1040 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 BICD1Q96G01 975 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 TSNARE1Q96NA8 513 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 RSPH14Q9UHP6 348 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 TNRQ92752 1358 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 XAGE3Q8WTP9 111 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 CCDC42Q96M95 316 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 PTPDC1A2A3K4 754 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 MYL5Q02045 173 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 C6orf50Q9HD87 102 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 HDAC9Q9UKV0 1011 aa15.43■□□□□ 0.06
MCF2L-225ENST00000480321 A0A1W2PRG0 241 aa15.42■□□□□ 0.06
MCF2L-225ENST00000480321 ASIC1P78348 528 aa15.42■□□□□ 0.06
MCF2L-225ENST00000480321 LMOD1P29536 600 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-225ENST00000480321 NAP1L4Q99733 375 aaKnown RBP15.42■□□□□ 0.06
MCF2L-225ENST00000480321 RBM28Q9NW13 759 aaKnown RBP15.42■□□□□ 0.06
MCF2L-225ENST00000480321 F8W031 263 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-225ENST00000480321 GTF2A1P52655 376 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-225ENST00000480321 VAV2P52735 878 aa15.42■□□□□ 0.06
MCF2L-225ENST00000480321 MAP3K5Q99683 1374 aa15.42■□□□□ 0.06
MCF2L-225ENST00000480321 RLBP1P12271 317 aa15.42■□□□□ 0.06
MCF2L-225ENST00000480321 MARCKSP29966 332 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-225ENST00000480321 CCDC121Q6ZUS5 278 aa15.42■□□□□ 0.06
MCF2L-225ENST00000480321 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
MCF2L-225ENST00000480321 IFNKQ9P0W0 207 aa15.42■□□□□ 0.06
MCF2L-225ENST00000480321 EIF4A2Q14240 407 aaKnown RBP15.41■□□□□ 0.06
MCF2L-225ENST00000480321 MSL1Q68DK7 614 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 NLRP3Q96P20 1036 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 TESK2Q96S53 571 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 ATP2A1O14983 1001 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 IMPACTQ9P2X3 320 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 POLKQ9UBT6 870 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 IQSEC3Q9UPP2 1182 aaPredicted RBP15.41■□□□□ 0.06
MCF2L-225ENST00000480321 TNNC1P63316 161 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 COPS6Q7L5N1 327 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 KDM2BQ8NHM5 1336 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 IQUBQ8NA54 791 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 FBF1Q8TES7 1133 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 DHX58Q96C10 678 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 CTTNBP2Q8WZ74 1663 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 KIF24Q5T7B8 1368 aa15.41■□□□□ 0.06
MCF2L-225ENST00000480321 GRIPAP1Q4V328 841 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 TTC16Q8NEE8 873 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 NEK11Q8NG66 645 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 LMBR1LQ6UX01 489 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 LRRC2Q9BYS8 371 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 MMRN2Q9H8L6 949 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 SLC9C2Q5TAH2 1124 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 LUC7L2Q9Y383 392 aaKnown RBP15.4■□□□□ 0.06
MCF2L-225ENST00000480321 NPATQ14207 1427 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 ZBTB7BO15156 539 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-225ENST00000480321 FERP16591 822 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 FBLN1P23142 703 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 ATRIPQ8WXE1 791 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 AKR1B15C9JRZ8 316 aaPredicted RBP15.4■□□□□ 0.06
MCF2L-225ENST00000480321 SLC39A6Q13433 755 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 SYT10Q6XYQ8 523 aa15.4■□□□□ 0.06
MCF2L-225ENST00000480321 ABCC1P33527 1531 aa15.39■□□□□ 0.06
MCF2L-225ENST00000480321 UBXN1Q04323 297 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 OGFOD1Q8N543 542 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 BAG1Q99933 345 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-225ENST00000480321 PICALMQ13492 652 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 A2MP01023 1474 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 ZNF569Q5MCW4 686 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 KRT79Q5XKE5 535 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 NAA16Q6N069 864 aaPredicted RBP15.39■□□□□ 0.05
MCF2L-225ENST00000480321 NIP7Q9Y221 180 aaKnown RBP eCLIP15.39■□□□□ 0.05
MCF2L-225ENST00000480321 OTUD6BQ8N6M0 293 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 LRRC45Q96CN5 670 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 TCEANC2Q96MN5 208 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 CLSTN2Q9H4D0 955 aa15.39■□□□□ 0.05
MCF2L-225ENST00000480321 TTF2Q9UNY4 1162 aaKnown RBP15.39■□□□□ 0.05
MCF2L-225ENST00000480321 TOM1O60784 492 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 RPS6KB1P23443 525 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 PPP1R14CQ8TAE6 165 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 FAM76AQ8TAV0 307 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 IQCGQ9H095 443 aaKnown RBP15.38■□□□□ 0.05
MCF2L-225ENST00000480321 HEATR3Q7Z4Q2 680 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 UBAP1LF5GYI3 381 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 MTRF1LQ9UGC7 380 aaKnown RBP15.38■□□□□ 0.05
MCF2L-225ENST00000480321 ATP2C2O75185 946 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 GNA11P29992 359 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 NAPAP54920 295 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 TTC31Q49AM3 519 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-225ENST00000480321 VPS18Q9P253 973 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 MAGEB6P1A0A0J9YX57 407 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 HOXB7P09629 217 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 GABPB1Q06547 395 aaPredicted RBP15.38■□□□□ 0.05
MCF2L-225ENST00000480321 RILPL1Q5EBL4 403 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 CEP128Q6ZU80 1094 aa15.38■□□□□ 0.05
MCF2L-225ENST00000480321 ZNF804AQ7Z570 1209 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms