RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 NLGN1Q8N2Q7 840 aa12.65□□□□□ -0.38
LINC00173-203ENST00000480237 HELBQ8NG08 1087 aaPredicted RBP12.65□□□□□ -0.38
LINC00173-203ENST00000480237 RPGRQ92834 1020 aaKnown RBP12.65□□□□□ -0.38
LINC00173-203ENST00000480237 OTUD5Q96G74 571 aa12.65□□□□□ -0.38
LINC00173-203ENST00000480237 DDRGK1Q96HY6 314 aa12.65□□□□□ -0.38
LINC00173-203ENST00000480237 HAUS7Q99871 368 aa12.65□□□□□ -0.38
LINC00173-203ENST00000480237 ESYT1Q9BSJ8 1104 aa12.65□□□□□ -0.38
LINC00173-203ENST00000480237 FOCADQ5VW36 1801 aa12.65□□□□□ -0.38
LINC00173-203ENST00000480237 HIP1O00291 1037 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 IFIT1P09914 478 aaKnown RBP12.64□□□□□ -0.39
LINC00173-203ENST00000480237 CHRNDQ07001 517 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 SLC15A2Q16348 729 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 TMEM92Q6UXU6 159 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 DEFB132Q7Z7B7 95 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 CELF1Q92879 486 aaKnown RBP12.64□□□□□ -0.39
LINC00173-203ENST00000480237 NAV1Q8NEY1 1877 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 TAF5LO75529 589 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 MSL1Q68DK7 614 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 SLAIN1Q8ND83 568 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 TMC2Q8TDI7 906 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.64□□□□□ -0.39
LINC00173-203ENST00000480237 RUFY2Q8WXA3 655 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 LPIN2Q92539 896 aa12.64□□□□□ -0.39
LINC00173-203ENST00000480237 BSDC1Q9NW68 430 aaPredicted RBP12.64□□□□□ -0.39
LINC00173-203ENST00000480237 DUOX1Q9NRD9 1551 aa12.63□□□□□ -0.39
LINC00173-203ENST00000480237 ZNF646O15015 1829 aaPredicted RBP12.63□□□□□ -0.39
LINC00173-203ENST00000480237 MYH1P12882 1939 aa12.63□□□□□ -0.39
LINC00173-203ENST00000480237 EDC3Q96F86 508 aaKnown RBP12.63□□□□□ -0.39
LINC00173-203ENST00000480237 PAG1Q9NWQ8 432 aa12.63□□□□□ -0.39
LINC00173-203ENST00000480237 PARP3Q9Y6F1 533 aa12.63□□□□□ -0.39
LINC00173-203ENST00000480237 NDUFB9Q9Y6M9 179 aa12.63□□□□□ -0.39
LINC00173-203ENST00000480237 MYH6P13533 1939 aa12.62□□□□□ -0.39
LINC00173-203ENST00000480237 GOLIM4O00461 696 aa12.62□□□□□ -0.39
LINC00173-203ENST00000480237 MMP10P09238 476 aa12.62□□□□□ -0.39
LINC00173-203ENST00000480237 FGFR2P21802 821 aa12.62□□□□□ -0.39
LINC00173-203ENST00000480237 RPS8P62241 208 aaKnown RBP12.62□□□□□ -0.39
LINC00173-203ENST00000480237 CWC27Q6UX04 472 aaKnown RBP12.62□□□□□ -0.39
LINC00173-203ENST00000480237 IPO9Q96P70 1041 aaKnown RBP12.62□□□□□ -0.39
LINC00173-203ENST00000480237 ANO2Q9NQ90 1003 aa12.62□□□□□ -0.39
LINC00173-203ENST00000480237 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
LINC00173-203ENST00000480237 RBM25P49756 843 aaKnown RBP12.61□□□□□ -0.39
LINC00173-203ENST00000480237 GRAPQ13588 217 aa12.61□□□□□ -0.39
LINC00173-203ENST00000480237 GRAPLQ8TC17 118 aaPredicted RBP12.61□□□□□ -0.39
LINC00173-203ENST00000480237 RAD50Q92878 1312 aa12.61□□□□□ -0.39
LINC00173-203ENST00000480237 ARFGEF1Q9Y6D6 1849 aa12.61□□□□□ -0.39
LINC00173-203ENST00000480237 SGSM2O43147 1006 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 UQCRFS1P1P0C7P4 283 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 MCCP23508 829 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 KCNJ4P48050 445 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 NMIQ13287 307 aaPredicted RBP12.6□□□□□ -0.39
LINC00173-203ENST00000480237 KBTBD3Q8NAB2 608 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 RBM17Q96I25 401 aaKnown RBP12.6□□□□□ -0.39
LINC00173-203ENST00000480237 ANKRD2Q9GZV1 360 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 MINPP1Q9UNW1 487 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 ARID4AP29374 1257 aaPredicted RBP12.6□□□□□ -0.39
LINC00173-203ENST00000480237 PHKA1P46020 1223 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 FKBP4Q02790 459 aaKnown RBP eCLIP12.6□□□□□ -0.39
LINC00173-203ENST00000480237 CRY2Q49AN0 593 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 CCDC102BQ68D86 513 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 KIAA1211Q6ZU35 1233 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 CCDC125Q86Z20 511 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 LARP6Q9BRS8 491 aaKnown RBP12.6□□□□□ -0.39
LINC00173-203ENST00000480237 USP26Q9BXU7 913 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 SNRKQ9NRH2 765 aa12.6□□□□□ -0.39
LINC00173-203ENST00000480237 SCN9AQ15858 1988 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 FER1L6Q2WGJ9 1857 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 MED23Q9ULK4 1368 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 SNAP23O00161 211 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 MCAMP43121 646 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 UBE4AQ14139 1066 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 SCARF1Q14162 830 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 ZNF512BQ96KM6 892 aaPredicted RBP12.59□□□□□ -0.39
LINC00173-203ENST00000480237 CRISPLD2Q9H0B8 497 aa12.59□□□□□ -0.39
LINC00173-203ENST00000480237 GPHNQ9NQX3 736 aaPredicted RBP12.59□□□□□ -0.39
LINC00173-203ENST00000480237 DAXXQ9UER7 740 aaPredicted RBP12.59□□□□□ -0.39
LINC00173-203ENST00000480237 A0A0D9SFI3 127 aa12.58□□□□□ -0.4
LINC00173-203ENST00000480237 LRRFIP1Q32MZ4 808 aaKnown RBP12.58□□□□□ -0.4
LINC00173-203ENST00000480237 FAM227BQ96M60 508 aa12.58□□□□□ -0.4
LINC00173-203ENST00000480237 BRIP1Q9BX63 1249 aa12.58□□□□□ -0.4
LINC00173-203ENST00000480237 IL25Q9H293 177 aa12.58□□□□□ -0.4
LINC00173-203ENST00000480237 ADAMTSL1Q8N6G6 1762 aa12.58□□□□□ -0.4
LINC00173-203ENST00000480237 PDE6BP35913 854 aa12.57□□□□□ -0.4
LINC00173-203ENST00000480237 ZAP70P43403 619 aa12.57□□□□□ -0.4
LINC00173-203ENST00000480237 BECN1Q14457 450 aa12.57□□□□□ -0.4
LINC00173-203ENST00000480237 PI16Q6UXB8 463 aa12.57□□□□□ -0.4
LINC00173-203ENST00000480237 TCHHQ07283 1943 aa12.57□□□□□ -0.4
LINC00173-203ENST00000480237 XDHP47989 1333 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 CCDC171Q6TFL3 1326 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 KIF3CO14782 793 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 EPB41L2O43491 1005 aaKnown RBP12.56□□□□□ -0.4
LINC00173-203ENST00000480237 HOXA10P31260 410 aaPredicted RBP12.56□□□□□ -0.4
LINC00173-203ENST00000480237 TTF1Q15361 905 aaPredicted RBP12.56□□□□□ -0.4
LINC00173-203ENST00000480237 TICAM2Q86XR7 235 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 VPS37DQ86XT2 251 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 CRAMP1Q96RY5 1269 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 ANTXR1Q9H6X2 564 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 GNL3LQ9NVN8 582 aaKnown RBP12.56□□□□□ -0.4
LINC00173-203ENST00000480237 ANKIB1Q9P2G1 1089 aa12.56□□□□□ -0.4
LINC00173-203ENST00000480237 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
LINC00173-203ENST00000480237 DICER1Q9UPY3 1922 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms