RNA–Protein interactions for RNA: ENST00000480219.1

SCAMP3-207, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-207ENST00000480219 PODNQ7Z5L7 613 aa20.44■□□□□ 0.86
SCAMP3-207ENST00000480219 EDC3Q96F86 508 aaKnown RBP20.44■□□□□ 0.86
SCAMP3-207ENST00000480219 DNAJC2Q99543 621 aaKnown RBP20.44■□□□□ 0.86
SCAMP3-207ENST00000480219 TMED8Q6PL24 325 aaPredicted RBP20.43■□□□□ 0.86
SCAMP3-207ENST00000480219 RILPL2Q969X0 211 aa20.43■□□□□ 0.86
SCAMP3-207ENST00000480219 ANTXR1Q9H6X2 564 aa20.43■□□□□ 0.86
SCAMP3-207ENST00000480219 SNRKQ9NRH2 765 aa20.43■□□□□ 0.86
SCAMP3-207ENST00000480219 NDUFB9Q9Y6M9 179 aa20.43■□□□□ 0.86
SCAMP3-207ENST00000480219 ZNF646O15015 1829 aaPredicted RBP20.43■□□□□ 0.86
SCAMP3-207ENST00000480219 HIP1O00291 1037 aa20.42■□□□□ 0.86
SCAMP3-207ENST00000480219 CHMLP26374 656 aa20.42■□□□□ 0.86
SCAMP3-207ENST00000480219 TBC1D9Q6ZT07 1266 aa20.42■□□□□ 0.86
SCAMP3-207ENST00000480219 TAOK3Q9H2K8 898 aa20.42■□□□□ 0.86
SCAMP3-207ENST00000480219 RIMBP2O15034 1052 aa20.41■□□□□ 0.86
SCAMP3-207ENST00000480219 WDR66Q8TBY9 1149 aa20.41■□□□□ 0.86
SCAMP3-207ENST00000480219 BACH2Q9BYV9 841 aa20.41■□□□□ 0.86
SCAMP3-207ENST00000480219 PIH1D3Q9NQM4 214 aaKnown RBP20.41■□□□□ 0.86
SCAMP3-207ENST00000480219 COL4A5P29400 1685 aa20.41■□□□□ 0.86
SCAMP3-207ENST00000480219 CHD4Q14839 1912 aa20.41■□□□□ 0.86
SCAMP3-207ENST00000480219 ZFYP08048 801 aaPredicted RBP20.4■□□□□ 0.86
SCAMP3-207ENST00000480219 PSME4Q14997 1843 aa20.4■□□□□ 0.86
SCAMP3-207ENST00000480219 AOC3Q16853 763 aa20.4■□□□□ 0.86
SCAMP3-207ENST00000480219 LRRFIP1Q32MZ4 808 aaKnown RBP20.4■□□□□ 0.86
SCAMP3-207ENST00000480219 FSD1Q9BTV5 496 aa20.4■□□□□ 0.86
SCAMP3-207ENST00000480219 IQSEC3Q9UPP2 1182 aaPredicted RBP20.4■□□□□ 0.86
SCAMP3-207ENST00000480219 PPIP5K2O43314 1243 aa20.39■□□□□ 0.85
SCAMP3-207ENST00000480219 IARSP41252 1262 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-207ENST00000480219 FKBP1AP62942 108 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-207ENST00000480219 ZGPATQ8N5A5 531 aaKnown RBP20.39■□□□□ 0.85
SCAMP3-207ENST00000480219 TBC1D22AQ8WUA7 517 aa20.39■□□□□ 0.85
SCAMP3-207ENST00000480219 MYH7P12883 1935 aa20.39■□□□□ 0.85
SCAMP3-207ENST00000480219 MAST2Q6P0Q8 1798 aa20.39■□□□□ 0.85
SCAMP3-207ENST00000480219 GOLGB1Q14789 3259 aaKnown RBP20.38■□□□□ 0.85
SCAMP3-207ENST00000480219 FRAT2O75474 233 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-207ENST00000480219 ZNF277Q9NRM2 450 aaPredicted RBP20.38■□□□□ 0.85
SCAMP3-207ENST00000480219 SUGT1Q9Y2Z0 365 aa20.38■□□□□ 0.85
SCAMP3-207ENST00000480219 RAD50Q92878 1312 aa20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 ECE2O60344 883 aa20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 EIF5BO60841 1220 aaKnown RBP20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 UBE3CQ15386 1083 aa20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 DOK7Q18PE1 504 aa20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 ZSCAN25Q6NSZ9 544 aa20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 CASC1Q6TDU7 716 aa20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 DDX24Q9GZR7 859 aaKnown RBP eCLIP20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 SCN9AQ15858 1988 aa20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 MYO5AQ9Y4I1 1855 aaKnown RBP20.37■□□□□ 0.85
SCAMP3-207ENST00000480219 TCRBV5S4A2TA0A5A2 114 aa20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 RNF113AO15541 343 aaKnown RBP20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 ADD2P35612 726 aa20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 MAP3K12Q12852 859 aa20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 ZMYM1Q5SVZ6 1142 aa20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 STRIP1Q5VSL9 837 aa20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 SPTY2D1Q68D10 685 aaPredicted RBP20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 DBNDD1Q9H9R9 158 aa20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 WWC3Q9ULE0 1092 aa20.36■□□□□ 0.85
SCAMP3-207ENST00000480219 SRCAPQ6ZRS2 3230 aa20.35■□□□□ 0.85
SCAMP3-207ENST00000480219 YDJCA8MPS7 323 aa20.35■□□□□ 0.85
SCAMP3-207ENST00000480219 SGSM2O43147 1006 aa20.35■□□□□ 0.85
SCAMP3-207ENST00000480219 PRELPP51888 382 aa20.35■□□□□ 0.85
SCAMP3-207ENST00000480219 LARGE2Q8N3Y3 721 aa20.35■□□□□ 0.85
SCAMP3-207ENST00000480219 ESYT1Q9BSJ8 1104 aa20.35■□□□□ 0.85
SCAMP3-207ENST00000480219 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 PDE6AP16499 860 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 YBX3P16989 372 aaKnown RBP eCLIP20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 GTF2IP78347 998 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 CHAF1AQ13111 956 aaPredicted RBP20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 DACT2Q5SW24 774 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 RUFY2Q8WXA3 655 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 APPBP2Q92624 585 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 HELLSQ9NRZ9 838 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 DIAPH3Q9NSV4 1193 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 ZNRF3Q9ULT6 936 aa20.34■□□□□ 0.85
SCAMP3-207ENST00000480219 G3V3G9 751 aa20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 IDH1O75874 414 aaKnown RBP20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 NMIQ13287 307 aaPredicted RBP20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 DCAF8Q5TAQ9 597 aa20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 TTLL5Q6EMB2 1281 aa20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 ERICH6Q7L0X2 663 aa20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 ZNF384Q8TF68 577 aa20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 NSUN4Q96CB9 384 aaKnown RBP20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 LRP2BPQ9P2M1 347 aa20.33■□□□□ 0.85
SCAMP3-207ENST00000480219 DICER1Q9UPY3 1922 aaKnown RBP20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 A0A0D9SFI3 127 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 USP17L3A6NCW0 530 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 USP17L4A6NCW7 530 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 PRDX5P30044 214 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 RASSF7Q02833 373 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 MFSD14BQ5SR56 506 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 SLC9C2Q5TAH2 1124 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 USP17L1Q7RTZ2 530 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 NIM1KQ8IY84 436 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 FAM227BQ96M60 508 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 IL25Q9H293 177 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 ABCF2Q9UG63 623 aa20.32■□□□□ 0.84
SCAMP3-207ENST00000480219 CCDC88AQ3V6T2 1871 aa20.31■□□□□ 0.84
SCAMP3-207ENST00000480219 CHGBP05060 677 aa20.31■□□□□ 0.84
SCAMP3-207ENST00000480219 LDHBP07195 334 aaKnown RBP20.31■□□□□ 0.84
SCAMP3-207ENST00000480219 CERS5Q8N5B7 392 aa20.31■□□□□ 0.84
SCAMP3-207ENST00000480219 SBF1O95248 1867 aa20.3■□□□□ 0.84
SCAMP3-207ENST00000480219 ZNF532Q9HCE3 1301 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms