RNA–Protein interactions for RNA: ENST00000479933.2

TNFRSF8-204, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best)

Gene TNFRSF8, Length 2,120 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-204ENST00000479933 TRMT112Q9UI30 125 aaKnown RBP22.45■■□□□ 1.18
TNFRSF8-204ENST00000479933 SLC4A9Q96Q91 983 aa22.45■■□□□ 1.18
TNFRSF8-204ENST00000479933 CDCA7Q9BWT1 371 aaPredicted RBP22.45■■□□□ 1.18
TNFRSF8-204ENST00000479933 NWD2Q9ULI1 1742 aa22.44■■□□□ 1.18
TNFRSF8-204ENST00000479933 AKAP11Q9UKA4 1901 aa22.44■■□□□ 1.18
TNFRSF8-204ENST00000479933 LIG1P18858 919 aa22.44■■□□□ 1.18
TNFRSF8-204ENST00000479933 PDIA3P30101 505 aaKnown RBP22.44■■□□□ 1.18
TNFRSF8-204ENST00000479933 USP25Q9UHP3 1055 aa22.44■■□□□ 1.18
TNFRSF8-204ENST00000479933 ZBTB1Q9Y2K1 713 aa22.44■■□□□ 1.18
TNFRSF8-204ENST00000479933 WDR19Q8NEZ3 1342 aa22.44■■□□□ 1.18
TNFRSF8-204ENST00000479933 SCARF1Q14162 830 aa22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 TNMDQ9H2S6 317 aa22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 AHDC1Q5TGY3 1603 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 SALL1Q9NSC2 1324 aa22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 CTDNEP1O95476 244 aa22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 ADCY5O95622 1261 aa22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 TTLL5Q6EMB2 1281 aa22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 DZIP3Q86Y13 1208 aaKnown RBP22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 COL16A1Q07092 1604 aaPredicted RBP22.43■■□□□ 1.18
TNFRSF8-204ENST00000479933 CBX1P83916 185 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 VGLL2Q8N8G2 317 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 CLSTN2Q9H4D0 955 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 TMEM51Q9NW97 253 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 DACT1Q9NYF0 836 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 ATRNO75882 1429 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 DHX16O60231 1041 aaKnown RBP22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 FGAP02671 866 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 UQCRFS1P1P0C7P4 283 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 RBM43Q6ZSC3 357 aaKnown RBP22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 SYNE4Q8N205 404 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 ZNF396Q96N95 335 aaPredicted RBP22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 SPTLC3Q9NUV7 552 aa22.42■■□□□ 1.18
TNFRSF8-204ENST00000479933 PDE8BO95263 885 aa22.41■■□□□ 1.18
TNFRSF8-204ENST00000479933 ZNF34Q8IZ26 560 aa22.41■■□□□ 1.18
TNFRSF8-204ENST00000479933 NCOA7Q8NI08 942 aa22.41■■□□□ 1.18
TNFRSF8-204ENST00000479933 BICD2Q8TD16 824 aa22.41■■□□□ 1.18
TNFRSF8-204ENST00000479933 DOT1LQ8TEK3 1739 aa22.41■■□□□ 1.18
TNFRSF8-204ENST00000479933 KAT6BQ8WYB5 2073 aa22.41■■□□□ 1.18
TNFRSF8-204ENST00000479933 A0A0G2JLW4 131 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 FOXP2O15409 715 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 MCAMP43121 646 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 CCT2P78371 535 aaKnown RBP22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 FAM200AQ8TCP9 573 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 SYTL4Q96C24 671 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 LRP5O75197 1615 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 MROH5Q6ZUA9 1318 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 ARAP2Q8WZ64 1704 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 GPAA1O43292 621 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 IPO4Q8TEX9 1081 aaKnown RBP22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 PUS7LQ9H0K6 701 aaKnown RBP22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 RCOR1Q9UKL0 485 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 NAP1L2Q9ULW6 460 aaPredicted RBP22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 ROBO1Q9Y6N7 1651 aa22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 DDX60Q8IY21 1712 aaKnown RBP22.4■■□□□ 1.18
TNFRSF8-204ENST00000479933 ZNF213O14771 459 aa22.39■■□□□ 1.18
TNFRSF8-204ENST00000479933 ADD2P35612 726 aa22.39■■□□□ 1.18
TNFRSF8-204ENST00000479933 UBE3CQ15386 1083 aa22.39■■□□□ 1.18
TNFRSF8-204ENST00000479933 RALYLQ86SE5 291 aaKnown RBP22.39■■□□□ 1.18
TNFRSF8-204ENST00000479933 MB21D2Q8IYB1 491 aaPredicted RBP22.39■■□□□ 1.18
TNFRSF8-204ENST00000479933 PGBD1Q96JS3 809 aa22.39■■□□□ 1.18
TNFRSF8-204ENST00000479933 ARID4AP29374 1257 aaPredicted RBP22.39■■□□□ 1.17
TNFRSF8-204ENST00000479933 TYRO3Q06418 890 aa22.39■■□□□ 1.17
TNFRSF8-204ENST00000479933 PRC1O43663 620 aa22.38■■□□□ 1.17
TNFRSF8-204ENST00000479933 PUM3Q15397 648 aaKnown RBP22.38■■□□□ 1.17
TNFRSF8-204ENST00000479933 TBC1D2BQ9UPU7 963 aa22.38■■□□□ 1.17
TNFRSF8-204ENST00000479933 CAVIN2O95810 425 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 TPM3P06753 285 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 ADD1P35611 737 aaKnown RBP22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 RGS22Q8NE09 1264 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 LPIN2Q92539 896 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 FEZ1Q99689 392 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 NCOA5Q9HCD5 579 aaKnown RBP22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 CARMIL3Q8ND23 1372 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 CHST3Q7LGC8 479 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 THRAP3Q9Y2W1 955 aaKnown RBP22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 MRVI1Q9Y6F6 885 aa22.37■■□□□ 1.17
TNFRSF8-204ENST00000479933 HAND2P61296 217 aa22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 NOLC1Q14978 699 aaKnown RBP eCLIP22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 CAMK4Q16566 473 aa22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 SLC9C2Q5TAH2 1124 aa22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 PI16Q6UXB8 463 aa22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 ANKRD7Q92527 254 aa22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 EIF5P55010 431 aaKnown RBP22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 TRDNQ13061 729 aa22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 DNTTIP2Q5QJE6 756 aaKnown RBP22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 UBN2Q6ZU65 1347 aa22.36■■□□□ 1.17
TNFRSF8-204ENST00000479933 CTAGE5O15320 804 aa22.35■■□□□ 1.17
TNFRSF8-204ENST00000479933 CCDC102BQ68D86 513 aa22.35■■□□□ 1.17
TNFRSF8-204ENST00000479933 PDCL2Q8N4E4 241 aa22.35■■□□□ 1.17
TNFRSF8-204ENST00000479933 NR1I2O75469 434 aa22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 CCDC87Q9NVE4 849 aa22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 CICQ96RK0 1608 aaPredicted RBP22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 RREB1Q92766 1687 aa22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 SLC5A1P13866 664 aa22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 FGFR2P21802 821 aa22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 PARP10Q53GL7 1025 aa22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 BCL2L12Q9HB09 334 aa22.34■■□□□ 1.17
TNFRSF8-204ENST00000479933 KLF18A0A0U1RQI7 1052 aa22.33■■□□□ 1.17
TNFRSF8-204ENST00000479933 GOLGA6L6A8MZA4 724 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 214.2 ms