RNA–Protein interactions for RNA: ENST00000479930.5

TTC3-216, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 8,998 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-216ENST00000479930 SLC13A4Q9UKG4 626 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 DDX39AO00148 427 aaKnown RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 CASQ1P31415 396 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 ATP6V0A1Q93050 837 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 AP5M1Q9H0R1 490 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 HEATR3Q7Z4Q2 680 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 DPP9Q86TI2 863 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 SCRIBQ14160 1630 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 ZRANB2O95218 330 aaKnown RBP eCLIP10.08□□□□□ -0.8
TTC3-216ENST00000479930 IRAK1BP1Q5VVH5 260 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 NIM1KQ8IY84 436 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 ATP2A2P16615 1042 aaKnown RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 MAP7Q14244 749 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 HP1BP3Q5SSJ5 553 aaPredicted RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 TEKT4Q8WW24 435 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 SPAG5Q96R06 1193 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 H0YIN7 160 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 NEMP1O14524 444 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 IFIT3O14879 490 aaKnown RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 SULF1Q8IWU6 871 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 GBP7Q8N8V2 638 aaPredicted RBP10.08□□□□□ -0.8
TTC3-216ENST00000479930 TRIM55Q9BYV6 548 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 ATP2A1O14983 1001 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 ITIH3Q06033 890 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 SRGAP1Q7Z6B7 1085 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 RAB11FIP4Q86YS3 637 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 ANGPTL3Q9Y5C1 460 aa10.08□□□□□ -0.8
TTC3-216ENST00000479930 RALGDSQ12967 914 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 PTK2BQ14289 1009 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 RNF219Q5W0B1 726 aaPredicted RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 RBM17Q96I25 401 aaKnown RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 CDAN1Q8IWY9 1227 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 PLVAPQ9BX97 442 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 DDX19BQ9UMR2 479 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 ZBED4O75132 1171 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 PDE1CQ14123 709 aaPredicted RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 SLMAPQ14BN4 828 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 CDC26Q8NHZ8 85 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 RPS6KC1Q96S38 1066 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 SLC12A2P55011 1212 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 BPIFB4P59827 614 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 MAP3K11Q16584 847 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 WDR44Q5JSH3 913 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 MYLK4Q86YV6 388 aaPredicted RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 PNISRQ8TF01 805 aaKnown RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 ASCC2Q9H1I8 757 aaPredicted RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 RTEL1Q9NZ71 1219 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 CCER2I3L3R5 266 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 ARSJQ5FYB0 599 aaPredicted RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 MAEAQ7L5Y9 396 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 ADAT2Q7Z6V5 191 aaKnown RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 RTCBQ9Y3I0 505 aaKnown RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 GNAI2P04899 355 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 CAPZA2P47755 286 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 CRNKL1Q9BZJ0 848 aaKnown RBP10.07□□□□□ -0.8
TTC3-216ENST00000479930 RGL1Q9NZL6 768 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 NCAPG2Q86XI2 1143 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 MAN1C1Q9NR34 630 aa10.07□□□□□ -0.8
TTC3-216ENST00000479930 OCRLQ01968 901 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 SPECC1LQ69YQ0 1117 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 CASC4Q6P4E1 433 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 IGBP1P78318 339 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 UBE3BQ7Z3V4 1068 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 TRPC6Q9Y210 931 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 CAPN9O14815 690 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 WASHC5Q12768 1159 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 CFAP100Q494V2 611 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 SND1Q7KZF4 910 aaKnown RBP eCLIP10.06□□□□□ -0.8
TTC3-216ENST00000479930 SMARCC1Q92922 1105 aaPredicted RBP10.06□□□□□ -0.8
TTC3-216ENST00000479930 VMP1Q96GC9 406 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 PRKRIP1Q9H875 184 aaPredicted RBP10.06□□□□□ -0.8
TTC3-216ENST00000479930 DAAM1Q9Y4D1 1078 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 TIPRLO75663 272 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 BRD1O95696 1058 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 RPS6KA2Q15349 733 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 PRPF38AQ8NAV1 312 aaKnown RBP10.06□□□□□ -0.8
TTC3-216ENST00000479930 PPP2R3CQ969Q6 453 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 HOOK2Q96ED9 719 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 JADE2Q9NQC1 790 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 RAB23Q9ULC3 237 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 IQSEC3Q9UPP2 1182 aaPredicted RBP10.06□□□□□ -0.8
TTC3-216ENST00000479930 CCDC85CA6NKD9 419 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 CTAGE5O15320 804 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 CHMP2AO43633 222 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 GUCY1B3Q02153 619 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 KCTD17Q8N5Z5 321 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 PCDHB13Q9Y5F0 798 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 FMNL3Q8IVF7 1028 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 METTL14Q9HCE5 456 aaKnown RBP10.06□□□□□ -0.8
TTC3-216ENST00000479930 SLC4A2P04920 1241 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 HMGB1P09429 215 aaKnown RBP10.06□□□□□ -0.8
TTC3-216ENST00000479930 NFE2L2Q16236 605 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 NUF2Q9BZD4 464 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 JAG2Q9Y219 1238 aa10.06□□□□□ -0.8
TTC3-216ENST00000479930 SMIM23A6NLE4 172 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 BSPRYQ5W0U4 402 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 DCLK2Q8N568 766 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.05□□□□□ -0.8
TTC3-216ENST00000479930 RAPGEF3O95398 923 aa10.05□□□□□ -0.8
TTC3-216ENST00000479930 ZNF174Q15697 407 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms