RNA–Protein interactions for RNA: ENST00000479782.1

RPP40-205, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 5

Gene RPP40, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-205ENST00000479782 NLGN2Q8NFZ4 835 aa17.17■□□□□ 0.34
RPP40-205ENST00000479782 EDC3Q96F86 508 aaKnown RBP17.17■□□□□ 0.34
RPP40-205ENST00000479782 GPR101Q96P66 508 aaPredicted RBP17.17■□□□□ 0.34
RPP40-205ENST00000479782 FHDC1Q9C0D6 1143 aaPredicted RBP17.17■□□□□ 0.34
RPP40-205ENST00000479782 VPS33BQ9H267 617 aa17.17■□□□□ 0.34
RPP40-205ENST00000479782 CD209Q9NNX6 404 aa17.17■□□□□ 0.34
RPP40-205ENST00000479782 COL1A1P02452 1464 aaPredicted RBP17.17■□□□□ 0.34
RPP40-205ENST00000479782 FER1L6Q2WGJ9 1857 aa17.16■□□□□ 0.34
RPP40-205ENST00000479782 MYH7P12883 1935 aa17.16■□□□□ 0.34
RPP40-205ENST00000479782 ZSCAN25Q6NSZ9 544 aa17.16■□□□□ 0.34
RPP40-205ENST00000479782 RUFY2Q8WXA3 655 aa17.16■□□□□ 0.34
RPP40-205ENST00000479782 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.16■□□□□ 0.34
RPP40-205ENST00000479782 ANTXR1Q9H6X2 564 aa17.16■□□□□ 0.34
RPP40-205ENST00000479782 DIAPH3Q9NSV4 1193 aa17.16■□□□□ 0.34
RPP40-205ENST00000479782 IQSEC3Q9UPP2 1182 aaPredicted RBP17.16■□□□□ 0.34
RPP40-205ENST00000479782 RIMBP2O15034 1052 aa17.15■□□□□ 0.34
RPP40-205ENST00000479782 IGSF3O75054 1194 aa17.15■□□□□ 0.34
RPP40-205ENST00000479782 ZFYP08048 801 aaPredicted RBP17.15■□□□□ 0.34
RPP40-205ENST00000479782 KIAA2012Q0VF49 1180 aa17.15■□□□□ 0.34
RPP40-205ENST00000479782 BCS1LQ9Y276 419 aa17.15■□□□□ 0.34
RPP40-205ENST00000479782 G3V3G9 751 aa17.14■□□□□ 0.33
RPP40-205ENST00000479782 DCAF8Q5TAQ9 597 aa17.14■□□□□ 0.33
RPP40-205ENST00000479782 ZGPATQ8N5A5 531 aaKnown RBP17.14■□□□□ 0.33
RPP40-205ENST00000479782 WDR66Q8TBY9 1149 aa17.14■□□□□ 0.33
RPP40-205ENST00000479782 MAST2Q6P0Q8 1798 aa17.14■□□□□ 0.33
RPP40-205ENST00000479782 RAD50Q92878 1312 aa17.14■□□□□ 0.33
RPP40-205ENST00000479782 SALL1Q9NSC2 1324 aa17.14■□□□□ 0.33
RPP40-205ENST00000479782 RNF113AO15541 343 aaKnown RBP17.13■□□□□ 0.33
RPP40-205ENST00000479782 MAP3K12Q12852 859 aa17.13■□□□□ 0.33
RPP40-205ENST00000479782 PODNQ7Z5L7 613 aa17.13■□□□□ 0.33
RPP40-205ENST00000479782 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
RPP40-205ENST00000479782 SYT17Q9BSW7 474 aa17.13■□□□□ 0.33
RPP40-205ENST00000479782 PIH1D3Q9NQM4 214 aaKnown RBP17.13■□□□□ 0.33
RPP40-205ENST00000479782 IDH1O75874 414 aaKnown RBP17.12■□□□□ 0.33
RPP40-205ENST00000479782 TMED8Q6PL24 325 aaPredicted RBP17.12■□□□□ 0.33
RPP40-205ENST00000479782 FAM205AQ6ZU69 1335 aa17.12■□□□□ 0.33
RPP40-205ENST00000479782 LTBP3Q9NS15 1303 aa17.12■□□□□ 0.33
RPP40-205ENST00000479782 MYO5AQ9Y4I1 1855 aaKnown RBP17.12■□□□□ 0.33
RPP40-205ENST00000479782 SGSM2O43147 1006 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 PPIP5K2O43314 1243 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 REC8O95072 547 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 CHAF1AQ13111 956 aaPredicted RBP17.11■□□□□ 0.33
RPP40-205ENST00000479782 NMIQ13287 307 aaPredicted RBP17.11■□□□□ 0.33
RPP40-205ENST00000479782 AOC3Q16853 763 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 SPTY2D1Q68D10 685 aaPredicted RBP17.11■□□□□ 0.33
RPP40-205ENST00000479782 CWC27Q6UX04 472 aaKnown RBP17.11■□□□□ 0.33
RPP40-205ENST00000479782 TBC1D22AQ8WUA7 517 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 TAOK3Q9H2K8 898 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 UPF2Q9HAU5 1272 aaKnown RBP17.11■□□□□ 0.33
RPP40-205ENST00000479782 HELLSQ9NRZ9 838 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 LRP2BPQ9P2M1 347 aa17.11■□□□□ 0.33
RPP40-205ENST00000479782 CCDC88AQ3V6T2 1871 aa17.1■□□□□ 0.33
RPP40-205ENST00000479782 ADD2P35612 726 aa17.1■□□□□ 0.33
RPP40-205ENST00000479782 UBE3CQ15386 1083 aa17.1■□□□□ 0.33
RPP40-205ENST00000479782 DOK7Q18PE1 504 aa17.1■□□□□ 0.33
RPP40-205ENST00000479782 ZMYM1Q5SVZ6 1142 aa17.1■□□□□ 0.33
RPP40-205ENST00000479782 ABCF2Q9UG63 623 aa17.1■□□□□ 0.33
RPP40-205ENST00000479782 WWC3Q9ULE0 1092 aa17.1■□□□□ 0.33
RPP40-205ENST00000479782 A0A0D9SFI3 127 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 EPB41L2O43491 1005 aaKnown RBP17.09■□□□□ 0.33
RPP40-205ENST00000479782 ECE2O60344 883 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 SEC24BO95487 1268 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 MFAP1P55081 439 aaKnown RBP17.09■□□□□ 0.33
RPP40-205ENST00000479782 SLC9C2Q5TAH2 1124 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 ERICH6Q7L0X2 663 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 APPBP2Q92624 585 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 FAM227BQ96M60 508 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 PSME4Q14997 1843 aa17.09■□□□□ 0.33
RPP40-205ENST00000479782 CHD4Q14839 1912 aa17.08■□□□□ 0.33
RPP40-205ENST00000479782 ZNF646O15015 1829 aaPredicted RBP17.08■□□□□ 0.33
RPP40-205ENST00000479782 NFKBIEO00221 500 aa17.08■□□□□ 0.32
RPP40-205ENST00000479782 PDE6AP16499 860 aa17.08■□□□□ 0.32
RPP40-205ENST00000479782 IARSP41252 1262 aaKnown RBP17.08■□□□□ 0.32
RPP40-205ENST00000479782 MCMDC2Q4G0Z9 681 aa17.08■□□□□ 0.32
RPP40-205ENST00000479782 LARGE2Q8N3Y3 721 aa17.08■□□□□ 0.32
RPP40-205ENST00000479782 DBNDD1Q9H9R9 158 aa17.08■□□□□ 0.32
RPP40-205ENST00000479782 ZNF277Q9NRM2 450 aaPredicted RBP17.08■□□□□ 0.32
RPP40-205ENST00000479782 RAI14Q9P0K7 980 aa17.08■□□□□ 0.32
RPP40-205ENST00000479782 SUGT1Q9Y2Z0 365 aa17.08■□□□□ 0.32
RPP40-205ENST00000479782 ZNF532Q9HCE3 1301 aa17.07■□□□□ 0.32
RPP40-205ENST00000479782 TCRBV5S4A2TA0A5A2 114 aa17.07■□□□□ 0.32
RPP40-205ENST00000479782 LDHBP07195 334 aaKnown RBP17.07■□□□□ 0.32
RPP40-205ENST00000479782 GTF2IP78347 998 aa17.07■□□□□ 0.32
RPP40-205ENST00000479782 MFSD14BQ5SR56 506 aa17.07■□□□□ 0.32
RPP40-205ENST00000479782 MAGEB6Q8N7X4 407 aa17.07■□□□□ 0.32
RPP40-205ENST00000479782 FKBP1AP62942 108 aaKnown RBP17.06■□□□□ 0.32
RPP40-205ENST00000479782 STRIP1Q5VSL9 837 aa17.06■□□□□ 0.32
RPP40-205ENST00000479782 TTLL5Q6EMB2 1281 aa17.06■□□□□ 0.32
RPP40-205ENST00000479782 KIAA1211Q6ZU35 1233 aa17.06■□□□□ 0.32
RPP40-205ENST00000479782 MAST3O60307 1309 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 CCDC171Q6TFL3 1326 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 USP17L3A6NCW0 530 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 USP17L4A6NCW7 530 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 PRDX5P30044 214 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 GSTO1P78417 241 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 MECOMQ03112 1051 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 USP17L1Q7RTZ2 530 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 NIM1KQ8IY84 436 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 OSBP2Q969R2 916 aa17.05■□□□□ 0.32
RPP40-205ENST00000479782 NSUN4Q96CB9 384 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms