RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 EXOSC10Q01780 885 aaKnown RBP24.01■■□□□ 1.43
COL13A1-208ENST00000479733 PDIA6Q15084 440 aa24.01■■□□□ 1.43
COL13A1-208ENST00000479733 ATL3Q6DD88 541 aa24.01■■□□□ 1.43
COL13A1-208ENST00000479733 CCDC34Q96HJ3 373 aa24.01■■□□□ 1.43
COL13A1-208ENST00000479733 CFAP100Q494V2 611 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 ZKSCAN7Q9P0L1 754 aaPredicted RBP24■■□□□ 1.43
COL13A1-208ENST00000479733 UBASH3AP57075 661 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 HAUS7Q99871 368 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 ATP5J2-PTCD1G3V325 749 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 PTCD1O75127 700 aaKnown RBP24■■□□□ 1.43
COL13A1-208ENST00000479733 NLRP12P59046 1061 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 HAND2P61296 217 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 ST5P78524 1137 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 C8orf76Q96K31 380 aa24■■□□□ 1.43
COL13A1-208ENST00000479733 PLEKHG1Q9ULL1 1385 aa23.99■■□□□ 1.43
COL13A1-208ENST00000479733 ZRANB2O95218 330 aaKnown RBP eCLIP23.99■■□□□ 1.43
COL13A1-208ENST00000479733 TRIM65Q6PJ69 517 aa23.99■■□□□ 1.43
COL13A1-208ENST00000479733 KBTBD3Q8NAB2 608 aa23.99■■□□□ 1.43
COL13A1-208ENST00000479733 NEDD4P46934 1319 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 SALL1Q9NSC2 1324 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 EVCP57679 992 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 A0A1W2PQ27 194 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 A0A1W2PQ64 194 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 A0A1W2PQD8 194 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 TIMM10P62072 90 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 TEX35Q5T0J7 233 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 SYNE3Q6ZMZ3 975 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 COPRSQ9NQ92 184 aa23.98■■□□□ 1.43
COL13A1-208ENST00000479733 TMEM232C9JQI7 657 aa23.97■■□□□ 1.43
COL13A1-208ENST00000479733 PFKFB1P16118 471 aa23.97■■□□□ 1.43
COL13A1-208ENST00000479733 HSPD1P10809 573 aaKnown RBP23.97■■□□□ 1.43
COL13A1-208ENST00000479733 GYS2P54840 703 aa23.97■■□□□ 1.43
COL13A1-208ENST00000479733 KCNG4Q8TDN1 519 aa23.97■■□□□ 1.43
COL13A1-208ENST00000479733 TADA3O75528 432 aa23.96■■□□□ 1.43
COL13A1-208ENST00000479733 SASH3O75995 380 aa23.96■■□□□ 1.43
COL13A1-208ENST00000479733 RFX5P48382 616 aaPredicted RBP23.96■■□□□ 1.43
COL13A1-208ENST00000479733 BPIFA3Q9BQP9 254 aa23.96■■□□□ 1.43
COL13A1-208ENST00000479733 MYSM1Q5VVJ2 828 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 PDILTQ8N807 584 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 SMARCE1Q969G3 411 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 HSD3B7Q9H2F3 369 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 PAG1Q9NWQ8 432 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 PARP3Q9Y6F1 533 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 PHLPP2Q6ZVD8 1323 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 KIF28PB7ZC32 967 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 LMOD2Q6P5Q4 547 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 DIP2AQ14689 1571 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 PXDNQ92626 1479 aa23.95■■□□□ 1.42
COL13A1-208ENST00000479733 KCNA6P17658 529 aa23.94■■□□□ 1.42
COL13A1-208ENST00000479733 REXO1L1PQ8IX06 675 aa23.94■■□□□ 1.42
COL13A1-208ENST00000479733 ZNF274Q96GC6 653 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-208ENST00000479733 WDHD1O75717 1129 aaPredicted RBP23.94■■□□□ 1.42
COL13A1-208ENST00000479733 OAS2P29728 719 aaKnown RBP23.94■■□□□ 1.42
COL13A1-208ENST00000479733 GNG11P61952 73 aa23.94■■□□□ 1.42
COL13A1-208ENST00000479733 TOP1P11387 765 aaKnown RBP23.94■■□□□ 1.42
COL13A1-208ENST00000479733 PNOCQ13519 176 aa23.94■■□□□ 1.42
COL13A1-208ENST00000479733 AMOTQ4VCS5 1084 aa23.94■■□□□ 1.42
COL13A1-208ENST00000479733 NCAPD2Q15021 1401 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 LRRFIP1Q32MZ4 808 aaKnown RBP23.93■■□□□ 1.42
COL13A1-208ENST00000479733 WDR24Q96S15 920 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 METTL22Q9BUU2 404 aaPredicted RBP23.93■■□□□ 1.42
COL13A1-208ENST00000479733 AGXT2Q9BYV1 514 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 ZSWIM4Q9H7M6 989 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 TULP2O00295 520 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 CPLX1O14810 134 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 RAD51AP2Q09MP3 1159 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 KRBA2Q6ZNG9 492 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 MROH7-TTC4A0A0A0MT08 1334 aa23.93■■□□□ 1.42
COL13A1-208ENST00000479733 A0A087WZG4 1122 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 EFCAB8A8MWE9 144 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 ANKRD13DQ6ZTN6 518 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 TRIM34Q9BYJ4 488 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 KDM3BQ7LBC6 1761 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 MED1Q15648 1581 aaPredicted RBP23.92■■□□□ 1.42
COL13A1-208ENST00000479733 KLF18A0A0U1RQI7 1052 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 GOLGA8BA8MQT2 603 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 CCP110O43303 1012 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 TBC1D8O95759 1140 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 KCNJ6P48051 423 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 ANO1Q5XXA6 986 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 LMBR1LQ6UX01 489 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 PLCD3Q8N3E9 789 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 FBXO18Q8NFZ0 1043 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 DSCC1Q9BVC3 393 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 POLR3EQ9NVU0 708 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 FANCLQ9NW38 375 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 SH3TC1Q8TE82 1336 aa23.92■■□□□ 1.42
COL13A1-208ENST00000479733 YEATS4O95619 227 aa23.91■■□□□ 1.42
COL13A1-208ENST00000479733 SYKP43405 635 aa23.91■■□□□ 1.42
COL13A1-208ENST00000479733 FAM193AP78312 1265 aa23.91■■□□□ 1.42
COL13A1-208ENST00000479733 SMC1AQ14683 1233 aaKnown RBP23.91■■□□□ 1.42
COL13A1-208ENST00000479733 AXDND1Q5T1B0 1012 aaPredicted RBP23.91■■□□□ 1.42
COL13A1-208ENST00000479733 CREBRFQ8IUR6 639 aa23.91■■□□□ 1.42
COL13A1-208ENST00000479733 HSP90AB3PQ58FF7 597 aa23.91■■□□□ 1.42
COL13A1-208ENST00000479733 AIFM3Q96NN9 605 aa23.91■■□□□ 1.42
COL13A1-208ENST00000479733 PPP2R2CQ9Y2T4 447 aa23.91■■□□□ 1.42
COL13A1-208ENST00000479733 VWA3AA6NCI4 1184 aa23.9■■□□□ 1.42
COL13A1-208ENST00000479733 TRHP20396 242 aaPredicted RBP23.9■■□□□ 1.42
COL13A1-208ENST00000479733 ZFP91Q96JP5 570 aaPredicted RBP23.9■■□□□ 1.42
COL13A1-208ENST00000479733 PHF8Q9UPP1 1060 aa23.9■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms