RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 PTPN18Q99952 460 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 METTL22Q9BUU2 404 aaPredicted RBP8.53□□□□□ -1.04
VCP-205ENST00000479300 BSDC1Q9NW68 430 aaPredicted RBP8.53□□□□□ -1.04
VCP-205ENST00000479300 CWC25Q9NXE8 425 aaPredicted RBP8.53□□□□□ -1.04
VCP-205ENST00000479300 ANGEL1Q9UNK9 670 aaKnown RBP8.53□□□□□ -1.04
VCP-205ENST00000479300 TRIM17Q9Y577 477 aa8.53□□□□□ -1.04
VCP-205ENST00000479300 MYH3P11055 1940 aa8.52□□□□□ -1.04
VCP-205ENST00000479300 OTOFQ9HC10 1997 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 SNAP23O00161 211 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 HSP90B1P14625 803 aaKnown RBP8.52□□□□□ -1.05
VCP-205ENST00000479300 MAP3K11Q16584 847 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 ARMC9Q7Z3E5 817 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 FBXW7Q969H0 707 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 ARMC5Q96C12 935 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 GCC1Q96CN9 775 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 COA1Q9GZY4 146 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 DEFB129Q9H1M3 183 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 IFT57Q9NWB7 429 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 PTPN22Q9Y2R2 807 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 TRIOBPQ9H2D6 2365 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 MYO3BQ8WXR4 1341 aa8.52□□□□□ -1.05
VCP-205ENST00000479300 A0A1B0GUL6 1792 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 RANBP2P49792 3224 aaKnown RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 SPDYE2BA6NHP3 402 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 MANSC4A6NHS7 340 aaPredicted RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 DDX58O95786 925 aaKnown RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 SPDYE6P0CI01 402 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 NF2P35240 595 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 GTF2IP78347 998 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 CRHR2Q13324 411 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 CWF19L2Q2TBE0 894 aaKnown RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 SPDYE2Q495Y8 402 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 TTLL5Q6EMB2 1281 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 APOBEC3FQ8IUX4 373 aaKnown RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 TSPYL6Q8N831 410 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 CDC5LQ99459 802 aaKnown RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 MAP3K2Q9Y2U5 619 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 ZSWIM8A7E2V4 1837 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 ECM29Q5VYK3 1845 aa8.51□□□□□ -1.05
VCP-205ENST00000479300 COL1A1P02452 1464 aaPredicted RBP8.51□□□□□ -1.05
VCP-205ENST00000479300 ALDH1A1P00352 501 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 ZBTB48P10074 688 aaPredicted RBP8.5□□□□□ -1.05
VCP-205ENST00000479300 CASP7P55210 303 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 PLCB2Q00722 1185 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 NBPF12Q5TAG4 269 aaPredicted RBP8.5□□□□□ -1.05
VCP-205ENST00000479300 CCDC30Q5VVM6 783 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 INTS3Q68E01 1043 aaKnown RBP8.5□□□□□ -1.05
VCP-205ENST00000479300 CDAN1Q8IWY9 1227 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 SLC10A4Q96EP9 437 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 STK31Q9BXU1 1019 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 MRS2Q9HD23 443 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 COLQQ9Y215 455 aaPredicted RBP8.5□□□□□ -1.05
VCP-205ENST00000479300 ZNF804BA4D1E1 1349 aa8.5□□□□□ -1.05
VCP-205ENST00000479300 CLRN2A0PK11 232 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
VCP-205ENST00000479300 PI4KAP2A4QPH2 592 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 NEURL1BA8MQ27 555 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 H7C1W4 665 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 USP2O75604 605 aaPredicted RBP8.49□□□□□ -1.05
VCP-205ENST00000479300 INHBEP58166 350 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 G2E3Q7L622 706 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 PI4KAP1Q8N8J0 262 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 MTMR14Q8NCE2 650 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 ZNF333Q96JL9 665 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 PRMT6Q96LA8 375 aaPredicted RBP8.49□□□□□ -1.05
VCP-205ENST00000479300 CD209Q9NNX6 404 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 LEMD3Q9Y2U8 911 aa8.49□□□□□ -1.05
VCP-205ENST00000479300 DLGAP5Q15398 846 aa8.48□□□□□ -1.05
VCP-205ENST00000479300 KSR2Q6VAB6 950 aa8.48□□□□□ -1.05
VCP-205ENST00000479300 UBE3BQ7Z3V4 1068 aa8.48□□□□□ -1.05
VCP-205ENST00000479300 ERO1AQ96HE7 468 aa8.48□□□□□ -1.05
VCP-205ENST00000479300 MS4A4AQ96JQ5 239 aa8.48□□□□□ -1.05
VCP-205ENST00000479300 EFCC1Q9HA90 598 aa8.48□□□□□ -1.05
VCP-205ENST00000479300 F8W031 263 aaPredicted RBP8.47□□□□□ -1.05
VCP-205ENST00000479300 H0YGN5 161 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 TAF5LO75529 589 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 CSF1RP07333 972 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 ITGA6P23229 1130 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 MMP14P50281 582 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 SP3Q02447 781 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 CHRNDQ07001 517 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 NEXNQ0ZGT2 675 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 CFAP100Q494V2 611 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 HELBQ8NG08 1087 aaPredicted RBP8.47□□□□□ -1.05
VCP-205ENST00000479300 BRI3BPQ8WY22 251 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 OTUD5Q96G74 571 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 TEPSINQ96N21 525 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 PLA2G12BQ9BX93 195 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 JAG2Q9Y219 1238 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 PTCH2Q9Y6C5 1203 aa8.47□□□□□ -1.05
VCP-205ENST00000479300 PPP1R12BO60237 982 aaPredicted RBP8.46□□□□□ -1.06
VCP-205ENST00000479300 IL1R1P14778 569 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 GCKRQ14397 625 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 RASA3Q14644 834 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 CCDC27Q2M243 656 aa8.46□□□□□ -1.06
VCP-205ENST00000479300 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.46□□□□□ -1.06
VCP-205ENST00000479300 C15orf52Q6ZUT6 534 aaKnown RBP8.46□□□□□ -1.06
VCP-205ENST00000479300 FAM43AQ8N2R8 423 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms