RNA–Protein interactions for RNA: ENST00000479051.1

VARS-224, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 612 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-224ENST00000479051 KIF4BQ2VIQ3 1234 aa25.27■■□□□ 1.64
VARS-224ENST00000479051 SAMD7Q7Z3H4 446 aa25.27■■□□□ 1.64
VARS-224ENST00000479051 ZC3H15Q8WU90 426 aaKnown RBP25.27■■□□□ 1.64
VARS-224ENST00000479051 NEUROD6Q96NK8 337 aa25.27■■□□□ 1.64
VARS-224ENST00000479051 IQSEC3Q9UPP2 1182 aaPredicted RBP25.27■■□□□ 1.64
VARS-224ENST00000479051 ADAMTSL1Q8N6G6 1762 aa25.26■■□□□ 1.63
VARS-224ENST00000479051 TIMM10P62072 90 aa25.26■■□□□ 1.63
VARS-224ENST00000479051 CHAF1AQ13111 956 aaPredicted RBP25.26■■□□□ 1.63
VARS-224ENST00000479051 TBC1D10BQ4KMP7 808 aaPredicted RBP25.26■■□□□ 1.63
VARS-224ENST00000479051 RBM26Q5T8P6 1007 aaKnown RBP25.26■■□□□ 1.63
VARS-224ENST00000479051 TRPM4Q8TD43 1214 aa25.26■■□□□ 1.63
VARS-224ENST00000479051 TBC1D22AQ8WUA7 517 aa25.26■■□□□ 1.63
VARS-224ENST00000479051 GPR108Q9NPR9 543 aa25.26■■□□□ 1.63
VARS-224ENST00000479051 JAG2Q9Y219 1238 aa25.26■■□□□ 1.63
VARS-224ENST00000479051 MFSD14BQ5SR56 506 aa25.25■■□□□ 1.63
VARS-224ENST00000479051 GORABQ5T7V8 394 aa25.25■■□□□ 1.63
VARS-224ENST00000479051 KIAA0825Q8IV33 1275 aa25.25■■□□□ 1.63
VARS-224ENST00000479051 MYOZ2Q9NPC6 264 aa25.25■■□□□ 1.63
VARS-224ENST00000479051 ARAP2Q8WZ64 1704 aa25.25■■□□□ 1.63
VARS-224ENST00000479051 ZNF646O15015 1829 aaPredicted RBP25.25■■□□□ 1.63
VARS-224ENST00000479051 SEMA3EO15041 775 aa25.24■■□□□ 1.63
VARS-224ENST00000479051 MAP1SQ66K74 1059 aaPredicted RBP25.24■■□□□ 1.63
VARS-224ENST00000479051 XAGE2Q96GT9 111 aa25.24■■□□□ 1.63
VARS-224ENST00000479051 EXOC6BQ9Y2D4 811 aa25.24■■□□□ 1.63
VARS-224ENST00000479051 HSPA6P17066 643 aa25.23■■□□□ 1.63
VARS-224ENST00000479051 ADORA1P30542 326 aa25.23■■□□□ 1.63
VARS-224ENST00000479051 SIRT2Q8IXJ6 389 aa25.23■■□□□ 1.63
VARS-224ENST00000479051 CNTROBQ8N137 903 aa25.23■■□□□ 1.63
VARS-224ENST00000479051 CERS5Q8N5B7 392 aa25.23■■□□□ 1.63
VARS-224ENST00000479051 CRBNQ96SW2 442 aa25.23■■□□□ 1.63
VARS-224ENST00000479051 HIRAP54198 1017 aaPredicted RBP25.22■■□□□ 1.63
VARS-224ENST00000479051 TNNI3KQ59H18 835 aa25.22■■□□□ 1.63
VARS-224ENST00000479051 CCDC102BQ68D86 513 aa25.22■■□□□ 1.63
VARS-224ENST00000479051 WDR66Q8TBY9 1149 aa25.22■■□□□ 1.63
VARS-224ENST00000479051 DENND2AQ9ULE3 1009 aa25.22■■□□□ 1.63
VARS-224ENST00000479051 FPGT-TNNI3KV9GXZ4 949 aa25.22■■□□□ 1.63
VARS-224ENST00000479051 PHKA1P46020 1223 aa25.21■■□□□ 1.63
VARS-224ENST00000479051 PGAP2Q9UHJ9 254 aa25.21■■□□□ 1.63
VARS-224ENST00000479051 SUPT16HQ9Y5B9 1047 aaKnown RBP25.21■■□□□ 1.63
VARS-224ENST00000479051 F8W031 263 aaPredicted RBP25.2■■□□□ 1.62
VARS-224ENST00000479051 RAB11FIP3O75154 756 aa25.2■■□□□ 1.62
VARS-224ENST00000479051 EGFRP00533 1210 aa25.2■■□□□ 1.62
VARS-224ENST00000479051 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP25.2■■□□□ 1.62
VARS-224ENST00000479051 MYH13Q9UKX3 1938 aa25.2■■□□□ 1.62
VARS-224ENST00000479051 ZBTB22O15209 634 aa25.19■■□□□ 1.62
VARS-224ENST00000479051 AAMPQ13685 434 aa25.19■■□□□ 1.62
VARS-224ENST00000479051 DCPSQ96C86 337 aaKnown RBP25.19■■□□□ 1.62
VARS-224ENST00000479051 KIF1BPQ96EK5 621 aa25.19■■□□□ 1.62
VARS-224ENST00000479051 SUGT1Q9Y2Z0 365 aa25.19■■□□□ 1.62
VARS-224ENST00000479051 APLP1P51693 650 aa25.18■■□□□ 1.62
VARS-224ENST00000479051 SCARF1Q14162 830 aa25.18■■□□□ 1.62
VARS-224ENST00000479051 CCDC158Q5M9N0 1113 aa25.18■■□□□ 1.62
VARS-224ENST00000479051 TTF2Q9UNY4 1162 aaKnown RBP25.18■■□□□ 1.62
VARS-224ENST00000479051 MAST3O60307 1309 aa25.17■■□□□ 1.62
VARS-224ENST00000479051 ITGBL1O95965 494 aaPredicted RBP25.17■■□□□ 1.62
VARS-224ENST00000479051 DLGAP5Q15398 846 aa25.17■■□□□ 1.62
VARS-224ENST00000479051 CDC37L1Q7L3B6 337 aa25.17■■□□□ 1.62
VARS-224ENST00000479051 RHPN1Q8TCX5 695 aa25.17■■□□□ 1.62
VARS-224ENST00000479051 PDS5AQ29RF7 1337 aaKnown RBP25.16■■□□□ 1.62
VARS-224ENST00000479051 APBB1O00213 710 aa25.16■■□□□ 1.62
VARS-224ENST00000479051 UQCRFS1P1P0C7P4 283 aa25.16■■□□□ 1.62
VARS-224ENST00000479051 CLASRPQ8N2M8 674 aaKnown RBP25.16■■□□□ 1.62
VARS-224ENST00000479051 ZGPATQ8N5A5 531 aaKnown RBP25.16■■□□□ 1.62
VARS-224ENST00000479051 GGA3Q9NZ52 723 aa25.16■■□□□ 1.62
VARS-224ENST00000479051 RBM5P52756 815 aaKnown RBP eCLIP25.15■■□□□ 1.62
VARS-224ENST00000479051 TTC39AQ5SRH9 613 aa25.15■■□□□ 1.62
VARS-224ENST00000479051 SULF1Q8IWU6 871 aa25.15■■□□□ 1.62
VARS-224ENST00000479051 PASKQ96RG2 1323 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 WNT10BO00744 389 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 MYO1BO43795 1136 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 RASGRF1Q13972 1273 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 CFAP100Q494V2 611 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 KRT26Q7Z3Y9 468 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 AACSQ86V21 672 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 MTMR14Q8NCE2 650 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 DBNDD2Q9BQY9 259 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 SERPINA10Q9UK55 444 aa25.14■■□□□ 1.62
VARS-224ENST00000479051 COL1A1P02452 1464 aaPredicted RBP25.14■■□□□ 1.61
VARS-224ENST00000479051 PITPNM2Q9BZ72 1349 aa25.13■■□□□ 1.61
VARS-224ENST00000479051 SALL1Q9NSC2 1324 aa25.13■■□□□ 1.61
VARS-224ENST00000479051 ARID4AP29374 1257 aaPredicted RBP25.13■■□□□ 1.61
VARS-224ENST00000479051 HDLBPQ00341 1268 aaKnown RBP25.13■■□□□ 1.61
VARS-224ENST00000479051 ANGEL2Q5VTE6 544 aaKnown RBP25.13■■□□□ 1.61
VARS-224ENST00000479051 EAF2Q96CJ1 260 aaPredicted RBP25.13■■□□□ 1.61
VARS-224ENST00000479051 GLIS2Q9BZE0 524 aaPredicted RBP25.13■■□□□ 1.61
VARS-224ENST00000479051 CCDC8Q9H0W5 538 aaPredicted RBP25.13■■□□□ 1.61
VARS-224ENST00000479051 IL1RAPL2Q9NP60 686 aa25.13■■□□□ 1.61
VARS-224ENST00000479051 NBPF9Q3BBW0 867 aa25.12■■□□□ 1.61
VARS-224ENST00000479051 PCDHB15Q9Y5E8 787 aa25.12■■□□□ 1.61
VARS-224ENST00000479051 LDHBP07195 334 aaKnown RBP25.11■■□□□ 1.61
VARS-224ENST00000479051 SPTY2D1Q68D10 685 aaPredicted RBP25.11■■□□□ 1.61
VARS-224ENST00000479051 USP48Q86UV5 1035 aa25.11■■□□□ 1.61
VARS-224ENST00000479051 SPATA5Q8NB90 893 aa25.11■■□□□ 1.61
VARS-224ENST00000479051 TEKT1Q969V4 418 aa25.11■■□□□ 1.61
VARS-224ENST00000479051 LRRCC1Q9C099 1032 aa25.11■■□□□ 1.61
VARS-224ENST00000479051 DBNLQ9UJU6 430 aaKnown RBP25.11■■□□□ 1.61
VARS-224ENST00000479051 SPDYE2BA6NHP3 402 aa25.1■■□□□ 1.61
VARS-224ENST00000479051 IFIT2P09913 472 aaKnown RBP25.1■■□□□ 1.61
VARS-224ENST00000479051 SPDYE6P0CI01 402 aa25.1■■□□□ 1.61
VARS-224ENST00000479051 CRKP46108 304 aa25.1■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms