RNA–Protein interactions for RNA: ENST00000478886.1

CMTM6-202, Transcript of CKLF like MARVEL transmembrane domain containing 6, humanhuman

TSL 2

Gene CMTM6, Length 803 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM6-202ENST00000478886 TRIM50Q86XT4 487 aa10.09□□□□□ -0.79
CMTM6-202ENST00000478886 CCDC146Q8IYE0 955 aa10.09□□□□□ -0.79
CMTM6-202ENST00000478886 RUNDC1Q96C34 613 aa10.09□□□□□ -0.79
CMTM6-202ENST00000478886 PLEKHG2Q9H7P9 1386 aa10.09□□□□□ -0.79
CMTM6-202ENST00000478886 MEGF6O75095 1541 aa10.08□□□□□ -0.8
CMTM6-202ENST00000478886 PLEKHO1Q53GL0 409 aaPredicted RBP10.08□□□□□ -0.8
CMTM6-202ENST00000478886 GNASQ5JWF2 1037 aa10.08□□□□□ -0.8
CMTM6-202ENST00000478886 TMEM214Q6NUQ4 689 aaKnown RBP10.08□□□□□ -0.8
CMTM6-202ENST00000478886 GLI3P10071 1580 aa10.08□□□□□ -0.8
CMTM6-202ENST00000478886 OVOS2A0A0G2JMS6 1433 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 TMEM229AB2RXF0 380 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 RBM6P78332 1123 aaKnown RBP10.07□□□□□ -0.8
CMTM6-202ENST00000478886 AMOTQ4VCS5 1084 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 GAS2L2Q8NHY3 880 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 NANOS1Q8WY41 292 aaKnown RBP10.07□□□□□ -0.8
CMTM6-202ENST00000478886 SPG7Q9UQ90 795 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 DYRK1BQ9Y463 629 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 MAFBQ9Y5Q3 323 aaPredicted RBP10.07□□□□□ -0.8
CMTM6-202ENST00000478886 PKD1L3Q7Z443 1732 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 DISP2A7MBM2 1401 aa10.07□□□□□ -0.8
CMTM6-202ENST00000478886 CDC14CA4D256 554 aa10.06□□□□□ -0.8
CMTM6-202ENST00000478886 PLEKHF1Q96S99 279 aa10.06□□□□□ -0.8
CMTM6-202ENST00000478886 TIMMDC1Q9NPL8 285 aa10.06□□□□□ -0.8
CMTM6-202ENST00000478886 TFIP11Q9UBB9 837 aaKnown RBP10.06□□□□□ -0.8
CMTM6-202ENST00000478886 LRRC37A3O60309 1634 aa10.06□□□□□ -0.8
CMTM6-202ENST00000478886 TNS2Q63HR2 1409 aa10.06□□□□□ -0.8
CMTM6-202ENST00000478886 PALM3A6NDB9 673 aaPredicted RBP10.05□□□□□ -0.8
CMTM6-202ENST00000478886 EXOC5O00471 708 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 RXRBP28702 533 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 ATP1A2P50993 1020 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 DDB1Q16531 1140 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 C1orf141Q5JVX7 400 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 ZNF530Q6P9A1 599 aaPredicted RBP10.05□□□□□ -0.8
CMTM6-202ENST00000478886 ZCRB1Q8TBF4 217 aaKnown RBP10.05□□□□□ -0.8
CMTM6-202ENST00000478886 RHBDD1Q8TEB9 315 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 PPP1R12CQ9BZL4 782 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 SERTAD1Q9UHV2 236 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 THSD7AQ9UPZ6 1657 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 PCDH11XQ9BZA7 1347 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 PCDH11YQ9BZA8 1340 aa10.05□□□□□ -0.8
CMTM6-202ENST00000478886 SMTNP53814 917 aa10.04□□□□□ -0.8
CMTM6-202ENST00000478886 NFE2L2Q16236 605 aa10.04□□□□□ -0.8
CMTM6-202ENST00000478886 MTHFSDQ2M296 383 aaKnown RBP10.04□□□□□ -0.8
CMTM6-202ENST00000478886 PHACTR3Q96KR7 559 aa10.04□□□□□ -0.8
CMTM6-202ENST00000478886 MKRN1Q9UHC7 482 aaKnown RBP10.04□□□□□ -0.8
CMTM6-202ENST00000478886 APAF1O14727 1248 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 TMPOP42166 694 aaKnown RBP10.03□□□□□ -0.8
CMTM6-202ENST00000478886 CLDN10P78369 228 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 LMOD3Q0VAK6 560 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 PDE3BQ13370 1112 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 C4orf17Q53FE4 359 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 AKAP4Q5JQC9 854 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 RIPOR1Q6ZS17 1223 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 SV2AQ7L0J3 742 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 IFNL2Q8IZJ0 200 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 VWA5B2Q8N398 1253 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 TPCN2Q8NHX9 752 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 SLC4A9Q96Q91 983 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 GAS2L1Q99501 681 aaPredicted RBP10.03□□□□□ -0.8
CMTM6-202ENST00000478886 ZMYND15Q9H091 742 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 ZNF358Q9NW07 568 aa10.03□□□□□ -0.8
CMTM6-202ENST00000478886 RGS17Q9UGC6 210 aaPredicted RBP10.03□□□□□ -0.8
CMTM6-202ENST00000478886 MAP3K5Q99683 1374 aa10.02□□□□□ -0.8
CMTM6-202ENST00000478886 SHANK3Q9BYB0 1731 aa10.02□□□□□ -0.8
CMTM6-202ENST00000478886 BACH1O14867 736 aa10.02□□□□□ -0.81
CMTM6-202ENST00000478886 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
CMTM6-202ENST00000478886 PHKA2P46019 1235 aa10.02□□□□□ -0.81
CMTM6-202ENST00000478886 RIPK4P57078 832 aa10.02□□□□□ -0.81
CMTM6-202ENST00000478886 HNRNPUQ00839 825 aaKnown RBP eCLIP10.02□□□□□ -0.81
CMTM6-202ENST00000478886 POTEAQ6S8J7 498 aa10.02□□□□□ -0.81
CMTM6-202ENST00000478886 OGFOD1Q8N543 542 aa10.02□□□□□ -0.81
CMTM6-202ENST00000478886 NGEFQ8N5V2 710 aa10.02□□□□□ -0.81
CMTM6-202ENST00000478886 DDX54Q8TDD1 881 aaKnown RBP10.02□□□□□ -0.81
CMTM6-202ENST00000478886 RTF1Q92541 710 aaKnown RBP10.02□□□□□ -0.81
CMTM6-202ENST00000478886 DNAAF2Q9NVR5 837 aaKnown RBP10.02□□□□□ -0.81
CMTM6-202ENST00000478886 CUEDC1Q9NWM3 386 aaPredicted RBP10.02□□□□□ -0.81
CMTM6-202ENST00000478886 KIAA1024Q9UPX6 916 aa10.02□□□□□ -0.81
CMTM6-202ENST00000478886 RRP7AQ9Y3A4 280 aaKnown RBP10.02□□□□□ -0.81
CMTM6-202ENST00000478886 DLG5Q8TDM6 1919 aa10.01□□□□□ -0.81
CMTM6-202ENST00000478886 A0A1B0GTH6 734 aa10.01□□□□□ -0.81
CMTM6-202ENST00000478886 GNAT3A8MTJ3 354 aa10.01□□□□□ -0.81
CMTM6-202ENST00000478886 PHKG2P15735 406 aa10.01□□□□□ -0.81
CMTM6-202ENST00000478886 INSM1Q01101 510 aaPredicted RBP10.01□□□□□ -0.81
CMTM6-202ENST00000478886 MTFR1Q15390 333 aa10.01□□□□□ -0.81
CMTM6-202ENST00000478886 TRIM22Q8IYM9 498 aa10.01□□□□□ -0.81
CMTM6-202ENST00000478886 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.01□□□□□ -0.81
CMTM6-202ENST00000478886 ZNF837Q96EG3 531 aaPredicted RBP10.01□□□□□ -0.81
CMTM6-202ENST00000478886 RGS12O14924 1447 aa10□□□□□ -0.81
CMTM6-202ENST00000478886 A6NJY4 79 aa10□□□□□ -0.81
CMTM6-202ENST00000478886 HTATSF1O43719 755 aaKnown RBP10□□□□□ -0.81
CMTM6-202ENST00000478886 F11P03951 625 aa10□□□□□ -0.81
CMTM6-202ENST00000478886 PLA2G4AP47712 749 aa10□□□□□ -0.81
CMTM6-202ENST00000478886 CCDC102BQ68D86 513 aa10□□□□□ -0.81
CMTM6-202ENST00000478886 LARGE2Q8N3Y3 721 aa10□□□□□ -0.81
CMTM6-202ENST00000478886 GPR161Q8N6U8 529 aaKnown RBP10□□□□□ -0.81
CMTM6-202ENST00000478886 GMCL1Q96IK5 515 aa10□□□□□ -0.81
CMTM6-202ENST00000478886 ZNF594Q96JF6 807 aaPredicted RBP10□□□□□ -0.81
CMTM6-202ENST00000478886 YTHDC1Q96MU7 727 aaKnown RBP10□□□□□ -0.81
CMTM6-202ENST00000478886 H7C1W4 665 aa9.99□□□□□ -0.81
CMTM6-202ENST00000478886 ZBTB7BO15156 539 aaPredicted RBP9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms