RNA–Protein interactions for RNA: ENST00000478717.5

PDE8A-204, Transcript of phosphodiesterase 8A, humanhuman

TSL 1 (best)

Gene PDE8A, Length 2,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE8A-204ENST00000478717 GOLGA6L4A6NEF3 574 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 E7EWF7 191 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 CIAO1O76071 339 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 SCARF1Q14162 830 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 HSP90AB3PQ58FF7 597 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 PI16Q6UXB8 463 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 LEO1Q8WVC0 666 aaPredicted RBP21.18■□□□□ 0.98
PDE8A-204ENST00000478717 DSCC1Q9BVC3 393 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 NCOA5Q9HCD5 579 aaKnown RBP21.18■□□□□ 0.98
PDE8A-204ENST00000478717 ATG3Q9NT62 314 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 DACT1Q9NYF0 836 aa21.18■□□□□ 0.98
PDE8A-204ENST00000478717 CEBPZQ03701 1054 aaKnown RBP21.17■□□□□ 0.98
PDE8A-204ENST00000478717 SYTL4Q96C24 671 aaPredicted RBP21.17■□□□□ 0.98
PDE8A-204ENST00000478717 SCAND2PQ9GZW5 306 aaPredicted RBP21.17■□□□□ 0.98
PDE8A-204ENST00000478717 ZNF75DP51815 510 aa21.17■□□□□ 0.98
PDE8A-204ENST00000478717 HLFQ16534 295 aa21.17■□□□□ 0.98
PDE8A-204ENST00000478717 TAF7LQ5H9L4 462 aa21.17■□□□□ 0.98
PDE8A-204ENST00000478717 ZNF446Q9NWS9 450 aa21.17■□□□□ 0.98
PDE8A-204ENST00000478717 XIRP1Q702N8 1843 aaKnown RBP21.17■□□□□ 0.98
PDE8A-204ENST00000478717 MAP3K11Q16584 847 aa21.16■□□□□ 0.98
PDE8A-204ENST00000478717 TTC39AQ5SRH9 613 aa21.16■□□□□ 0.98
PDE8A-204ENST00000478717 CLIP2Q9UDT6 1046 aa21.16■□□□□ 0.98
PDE8A-204ENST00000478717 PARP4Q9UKK3 1724 aaKnown RBP21.16■□□□□ 0.98
PDE8A-204ENST00000478717 EXOSC10Q01780 885 aaKnown RBP21.16■□□□□ 0.98
PDE8A-204ENST00000478717 WASHC4Q2M389 1173 aa21.16■□□□□ 0.98
PDE8A-204ENST00000478717 CCDC158Q5M9N0 1113 aa21.16■□□□□ 0.98
PDE8A-204ENST00000478717 ELP1O95163 1332 aa21.16■□□□□ 0.98
PDE8A-204ENST00000478717 CTDNEP1O95476 244 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 HNRNPH2P55795 449 aaKnown RBP21.15■□□□□ 0.98
PDE8A-204ENST00000478717 HAND2P61296 217 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 HMGB1P09429 215 aaKnown RBP21.15■□□□□ 0.98
PDE8A-204ENST00000478717 KIF6Q6ZMV9 814 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 ZFP91Q96JP5 570 aaPredicted RBP21.15■□□□□ 0.98
PDE8A-204ENST00000478717 PGBD1Q96JS3 809 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 NUP62CLQ9H1M0 184 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 BTG4Q9NY30 223 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 TJP1Q07157 1748 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 KAT6BQ8WYB5 2073 aa21.15■□□□□ 0.98
PDE8A-204ENST00000478717 NUP188Q5SRE5 1749 aa21.14■□□□□ 0.98
PDE8A-204ENST00000478717 PFKFB2O60825 505 aa21.14■□□□□ 0.98
PDE8A-204ENST00000478717 RESTQ13127 1097 aa21.14■□□□□ 0.98
PDE8A-204ENST00000478717 NSUN7Q8NE18 718 aaKnown RBP21.14■□□□□ 0.98
PDE8A-204ENST00000478717 GPHNQ9NQX3 736 aaPredicted RBP21.14■□□□□ 0.98
PDE8A-204ENST00000478717 UBR2Q8IWV8 1755 aa21.14■□□□□ 0.98
PDE8A-204ENST00000478717 TNS2Q63HR2 1409 aa21.14■□□□□ 0.97
PDE8A-204ENST00000478717 IFIT5Q13325 482 aaKnown RBP21.14■□□□□ 0.97
PDE8A-204ENST00000478717 CALCOCO1Q9P1Z2 691 aa21.14■□□□□ 0.97
PDE8A-204ENST00000478717 ZAP70P43403 619 aa21.13■□□□□ 0.97
PDE8A-204ENST00000478717 TULP2O00295 520 aa21.13■□□□□ 0.97
PDE8A-204ENST00000478717 NR1I2O75469 434 aa21.13■□□□□ 0.97
PDE8A-204ENST00000478717 ZBTB38Q8NAP3 1195 aaPredicted RBP21.13■□□□□ 0.97
PDE8A-204ENST00000478717 SMARCC2Q8TAQ2 1214 aa21.13■□□□□ 0.97
PDE8A-204ENST00000478717 FTOQ9C0B1 505 aaKnown RBP eCLIP21.13■□□□□ 0.97
PDE8A-204ENST00000478717 DNAJC25Q9H1X3 360 aa21.13■□□□□ 0.97
PDE8A-204ENST00000478717 PCCAP05165 728 aaPredicted RBP21.13■□□□□ 0.97
PDE8A-204ENST00000478717 AEBP2Q6ZN18 517 aaPredicted RBP21.13■□□□□ 0.97
PDE8A-204ENST00000478717 PLA2G4DQ86XP0 818 aa21.13■□□□□ 0.97
PDE8A-204ENST00000478717 PTPDC1A2A3K4 754 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 STARD3NLO95772 234 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 GUCY1B3Q02153 619 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 PAXIP1Q6ZW49 1069 aaPredicted RBP21.12■□□□□ 0.97
PDE8A-204ENST00000478717 LRRN4CLQ8ND94 238 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 BICD2Q8TD16 824 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 NOL10Q9BSC4 688 aaKnown RBP21.12■□□□□ 0.97
PDE8A-204ENST00000478717 TNMDQ9H2S6 317 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 FOXP2O15409 715 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 TRIM28Q13263 835 aaKnown RBP21.12■□□□□ 0.97
PDE8A-204ENST00000478717 PUS7LQ9H0K6 701 aaKnown RBP21.12■□□□□ 0.97
PDE8A-204ENST00000478717 AKAP2Q9Y2D5 859 aa21.12■□□□□ 0.97
PDE8A-204ENST00000478717 CSF1RP07333 972 aa21.11■□□□□ 0.97
PDE8A-204ENST00000478717 PTPN14Q15678 1187 aa21.11■□□□□ 0.97
PDE8A-204ENST00000478717 SLC4A9Q96Q91 983 aa21.11■□□□□ 0.97
PDE8A-204ENST00000478717 GREM2Q9H772 168 aa21.11■□□□□ 0.97
PDE8A-204ENST00000478717 FAM53CQ9NYF3 392 aa21.11■□□□□ 0.97
PDE8A-204ENST00000478717 PDIA3P30101 505 aaKnown RBP21.11■□□□□ 0.97
PDE8A-204ENST00000478717 LDHAL6AQ6ZMR3 332 aa21.11■□□□□ 0.97
PDE8A-204ENST00000478717 FGAP02671 866 aa21.1■□□□□ 0.97
PDE8A-204ENST00000478717 GIGYF2Q6Y7W6 1299 aaKnown RBP21.1■□□□□ 0.97
PDE8A-204ENST00000478717 AGXT2Q9BYV1 514 aa21.1■□□□□ 0.97
PDE8A-204ENST00000478717 ITGA6P23229 1130 aa21.1■□□□□ 0.97
PDE8A-204ENST00000478717 METTL24Q5JXM2 366 aa21.1■□□□□ 0.97
PDE8A-204ENST00000478717 A0A087WWV3 80 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 ERCC6LQ2NKX8 1250 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 LLPHQ9BRT6 129 aaKnown RBP21.09■□□□□ 0.97
PDE8A-204ENST00000478717 TEX13AQ9BXU3 409 aaPredicted RBP21.09■□□□□ 0.97
PDE8A-204ENST00000478717 MAP3K15Q6ZN16 1313 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 ZNF165P49910 485 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 FILIP1Q7Z7B0 1213 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 NLRP10Q86W26 655 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 LRRC8AQ8IWT6 810 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 TTLL11Q8NHH1 800 aa21.09■□□□□ 0.97
PDE8A-204ENST00000478717 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.09■□□□□ 0.97
PDE8A-204ENST00000478717 ZSCAN16Q9H4T2 348 aaPredicted RBP21.09■□□□□ 0.97
PDE8A-204ENST00000478717 ADD1P35611 737 aaKnown RBP21.08■□□□□ 0.97
PDE8A-204ENST00000478717 RAB11FIP4Q86YS3 637 aa21.08■□□□□ 0.97
PDE8A-204ENST00000478717 SHANK3Q9BYB0 1731 aa21.08■□□□□ 0.97
PDE8A-204ENST00000478717 NEK11Q8NG66 645 aa21.08■□□□□ 0.96
PDE8A-204ENST00000478717 RIPOR2Q9Y4F9 1068 aa21.08■□□□□ 0.96
PDE8A-204ENST00000478717 POLR3GO15318 223 aaPredicted RBP21.07■□□□□ 0.96
PDE8A-204ENST00000478717 SKILP12757 684 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms