RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 C19orf57Q0VDD7 668 aa7.62□□□□□ -1.19
CDC42BPA-212ENST00000478573 IKBKEQ14164 716 aa7.62□□□□□ -1.19
CDC42BPA-212ENST00000478573 ANKRD34AQ69YU3 496 aa7.62□□□□□ -1.19
CDC42BPA-212ENST00000478573 BSNDQ8WZ55 320 aa7.62□□□□□ -1.19
CDC42BPA-212ENST00000478573 USP26Q9BXU7 913 aa7.62□□□□□ -1.19
CDC42BPA-212ENST00000478573 USP5P45974 858 aa7.61□□□□□ -1.19
CDC42BPA-212ENST00000478573 EHHADHQ08426 723 aa7.61□□□□□ -1.19
CDC42BPA-212ENST00000478573 BEND4Q6ZU67 534 aa7.61□□□□□ -1.19
CDC42BPA-212ENST00000478573 FAM20CQ8IXL6 584 aa7.61□□□□□ -1.19
CDC42BPA-212ENST00000478573 NXPE3Q969Y0 559 aa7.61□□□□□ -1.19
CDC42BPA-212ENST00000478573 LATS2Q9NRM7 1088 aa7.61□□□□□ -1.19
CDC42BPA-212ENST00000478573 SOX1O00570 391 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 FZD6O60353 706 aa7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 COBLO75128 1261 aa7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 CD97P48960 835 aa7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 FKBP4Q02790 459 aaKnown RBP eCLIP7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 SF3B2Q13435 895 aaKnown RBP7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 RNF43Q68DV7 783 aa7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 CCDC87Q9NVE4 849 aa7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 AMOTL2Q9Y2J4 779 aa7.6□□□□□ -1.19
CDC42BPA-212ENST00000478573 MED26O95402 600 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 POLR3DP05423 398 aaPredicted RBP7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 NPR3P17342 541 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 RXRBP28702 533 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 PHLDB3Q6NSJ2 640 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 VN1R5Q7Z5H4 357 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 ZDHHC13Q8IUH4 622 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 CLEC10AQ8IUN9 316 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 DBNDD2Q9BQY9 259 aa7.59□□□□□ -1.19
CDC42BPA-212ENST00000478573 GRIK1P39086 918 aa7.58□□□□□ -1.2
CDC42BPA-212ENST00000478573 NUTM2GQ5VZR2 741 aa7.58□□□□□ -1.2
CDC42BPA-212ENST00000478573 ARID3AQ99856 593 aa7.58□□□□□ -1.2
CDC42BPA-212ENST00000478573 FAM83CQ9BQN1 747 aa7.58□□□□□ -1.2
CDC42BPA-212ENST00000478573 METTL12A8MUP2 240 aa7.57□□□□□ -1.2
CDC42BPA-212ENST00000478573 C12orf50Q8NA57 414 aaPredicted RBP7.57□□□□□ -1.2
CDC42BPA-212ENST00000478573 SHKBP1Q8TBC3 707 aa7.57□□□□□ -1.2
CDC42BPA-212ENST00000478573 GSTM4Q03013 218 aa7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 SGO2Q562F6 1265 aa7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 PEAR1Q5VY43 1037 aaPredicted RBP7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 GJD3Q8N144 294 aa7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 MFSD14AQ96MC6 490 aa7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 KRTAP9-2Q9BYQ4 174 aa7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 CYP4F12Q9HCS2 524 aa7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 HIF3AQ9Y2N7 669 aa7.56□□□□□ -1.2
CDC42BPA-212ENST00000478573 LOC100289279A0A1B0GTE1 492 aa7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 WDR64B1ANS9 1081 aa7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 H3BRB1 525 aa7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 ESRRAP11474 423 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 MAP4P27816 1152 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 BHLHE41Q9C0J9 482 aaPredicted RBP7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 TUT1Q9H6E5 874 aaKnown RBP7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 ZFYVE28Q9HCC9 887 aa7.55□□□□□ -1.2
CDC42BPA-212ENST00000478573 KIAA1324LA8MWY0 1029 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-212ENST00000478573 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.54□□□□□ -1.2
CDC42BPA-212ENST00000478573 MCTP1Q6DN14 999 aa7.54□□□□□ -1.2
CDC42BPA-212ENST00000478573 INTS5Q6P9B9 1019 aaKnown RBP7.54□□□□□ -1.2
CDC42BPA-212ENST00000478573 FBXL6Q8N531 539 aa7.54□□□□□ -1.2
CDC42BPA-212ENST00000478573 MEGF11A6BM72 1044 aa7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 PRR19A6NJB7 356 aa7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 SERPINB4P48594 390 aa7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 GP2P55259 537 aaKnown RBP7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 GLYCTKQ8IVS8 523 aa7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 TMPRSS13Q9BYE2 586 aa7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 SOX17Q9H6I2 414 aaPredicted RBP7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 BRPF3Q9ULD4 1205 aa7.53□□□□□ -1.2
CDC42BPA-212ENST00000478573 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 DLGAP3O95886 979 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 DRD2P14416 443 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 IRAK1P51617 712 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 USP11P51784 963 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 B4GALNT3Q6L9W6 998 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 SMG8Q8ND04 991 aaKnown RBP7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 GIMAP7Q8NHV1 300 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 LIN7BQ9HAP6 207 aa7.52□□□□□ -1.21
CDC42BPA-212ENST00000478573 A0A096LPE4 126 aa7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 A0A1W2PPZ6 126 aa7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 ICMTO60725 284 aa7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 PCDH1Q08174 1060 aa7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 NFKBIBQ15653 356 aa7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 FBLIM1Q8WUP2 373 aa7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 ATG3Q9NT62 314 aa7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 OAS3Q9Y6K5 1087 aaKnown RBP7.51□□□□□ -1.21
CDC42BPA-212ENST00000478573 A0A1W2PP55 124 aa7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 TIAF1O95411 115 aa7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 SPRED3Q2MJR0 410 aa7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 EXOSC6Q5RKV6 272 aaKnown RBP7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 USPL1Q5W0Q7 1092 aa7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 CLEC4MQ9H2X3 399 aaPredicted RBP7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 SUGCTQ9HAC7 445 aa7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 EGFL7Q9UHF1 273 aa7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 USTQ9Y2C2 406 aa7.5□□□□□ -1.21
CDC42BPA-212ENST00000478573 FAM95CA0A1B0GW59 222 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 NDUFB5O43674 189 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 ADAMTS4O75173 837 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 SPINK2P20155 84 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 GRIA4P48058 902 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 CCNJLQ8IV13 435 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 GALNT12Q8IXK2 581 aa7.49□□□□□ -1.21
CDC42BPA-212ENST00000478573 OSBPL1AQ9BXW6 950 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms