RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 MCAMP43121 646 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 PRELPP51888 382 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 RASGRF1Q13972 1273 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 SCARF1Q14162 830 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 NIM1KQ8IY84 436 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.75■□□□□ 0.75
VHL-203ENST00000477538 BOLA2Q9H3K6 86 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 MAST2Q6P0Q8 1798 aa19.75■□□□□ 0.75
VHL-203ENST00000477538 MYH2Q9UKX2 1941 aa19.74■□□□□ 0.75
VHL-203ENST00000477538 LMNB1P20700 586 aa19.74■□□□□ 0.75
VHL-203ENST00000477538 PODNQ7Z5L7 613 aa19.74■□□□□ 0.75
VHL-203ENST00000477538 DENND2AQ9ULE3 1009 aa19.74■□□□□ 0.75
VHL-203ENST00000477538 ZBTB22O15209 634 aa19.73■□□□□ 0.75
VHL-203ENST00000477538 PI16Q6UXB8 463 aa19.73■□□□□ 0.75
VHL-203ENST00000477538 SPATA5Q8NB90 893 aa19.73■□□□□ 0.75
VHL-203ENST00000477538 JDP2Q8WYK2 163 aa19.73■□□□□ 0.75
VHL-203ENST00000477538 HMG20BQ9P0W2 317 aa19.73■□□□□ 0.75
VHL-203ENST00000477538 CHAF1AQ13111 956 aaPredicted RBP19.72■□□□□ 0.75
VHL-203ENST00000477538 TTC22Q5TAA0 569 aa19.72■□□□□ 0.75
VHL-203ENST00000477538 DNAJC2Q99543 621 aaKnown RBP19.72■□□□□ 0.75
VHL-203ENST00000477538 HAUS7Q99871 368 aa19.72■□□□□ 0.75
VHL-203ENST00000477538 SNRKQ9NRH2 765 aa19.72■□□□□ 0.75
VHL-203ENST00000477538 NDUFB9Q9Y6M9 179 aa19.72■□□□□ 0.75
VHL-203ENST00000477538 PDS5AQ29RF7 1337 aaKnown RBP19.72■□□□□ 0.75
VHL-203ENST00000477538 DCAF8L1A6NGE4 600 aa19.71■□□□□ 0.75
VHL-203ENST00000477538 YDJCA8MPS7 323 aa19.71■□□□□ 0.75
VHL-203ENST00000477538 ZNRF3Q9ULT6 936 aa19.71■□□□□ 0.75
VHL-203ENST00000477538 ZAP70P43403 619 aa19.7■□□□□ 0.74
VHL-203ENST00000477538 FBXW7Q969H0 707 aa19.7■□□□□ 0.74
VHL-203ENST00000477538 RNF181Q9P0P0 153 aa19.7■□□□□ 0.74
VHL-203ENST00000477538 JAG2Q9Y219 1238 aa19.7■□□□□ 0.74
VHL-203ENST00000477538 FAM205AQ6ZU69 1335 aa19.7■□□□□ 0.74
VHL-203ENST00000477538 MAP4K4O95819 1239 aaPredicted RBP19.69■□□□□ 0.74
VHL-203ENST00000477538 GTF2IP78347 998 aa19.69■□□□□ 0.74
VHL-203ENST00000477538 KCNQ5Q9NR82 932 aa19.69■□□□□ 0.74
VHL-203ENST00000477538 PAG1Q9NWQ8 432 aa19.69■□□□□ 0.74
VHL-203ENST00000477538 GOLIM4O00461 696 aa19.68■□□□□ 0.74
VHL-203ENST00000477538 CYP2E1P05181 493 aaPredicted RBP19.68■□□□□ 0.74
VHL-203ENST00000477538 GSPT1P15170 499 aaKnown RBP19.68■□□□□ 0.74
VHL-203ENST00000477538 TTLL5Q6EMB2 1281 aa19.68■□□□□ 0.74
VHL-203ENST00000477538 WDR66Q8TBY9 1149 aa19.68■□□□□ 0.74
VHL-203ENST00000477538 EDC3Q96F86 508 aaKnown RBP19.68■□□□□ 0.74
VHL-203ENST00000477538 USP17L3A6NCW0 530 aa19.67■□□□□ 0.74
VHL-203ENST00000477538 USP17L4A6NCW7 530 aa19.67■□□□□ 0.74
VHL-203ENST00000477538 C9orf131Q5VYM1 1079 aa19.67■□□□□ 0.74
VHL-203ENST00000477538 USP17L1Q7RTZ2 530 aa19.67■□□□□ 0.74
VHL-203ENST00000477538 ANTXR1Q9H6X2 564 aa19.67■□□□□ 0.74
VHL-203ENST00000477538 ADAMTSL1Q8N6G6 1762 aa19.67■□□□□ 0.74
VHL-203ENST00000477538 TRIM6-TRIM34B2RNG4 842 aa19.66■□□□□ 0.74
VHL-203ENST00000477538 FZD9O00144 591 aa19.66■□□□□ 0.74
VHL-203ENST00000477538 RAD17O75943 681 aa19.66■□□□□ 0.74
VHL-203ENST00000477538 TTF1Q15361 905 aaPredicted RBP19.66■□□□□ 0.74
VHL-203ENST00000477538 STRIP1Q5VSL9 837 aa19.66■□□□□ 0.74
VHL-203ENST00000477538 CNTROBQ8N137 903 aa19.66■□□□□ 0.74
VHL-203ENST00000477538 ZGPATQ8N5A5 531 aaKnown RBP19.66■□□□□ 0.74
VHL-203ENST00000477538 TBC1D22AQ8WUA7 517 aa19.66■□□□□ 0.74
VHL-203ENST00000477538 SALL1Q9NSC2 1324 aa19.66■□□□□ 0.74
VHL-203ENST00000477538 EIF6P56537 245 aaKnown RBP19.65■□□□□ 0.74
VHL-203ENST00000477538 CXCL9Q07325 125 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 MFSD14BQ5SR56 506 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 DACT2Q5SW24 774 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 CIAPIN1Q6FI81 312 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 TBC1D9Q6ZT07 1266 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 RILPL2Q969X0 211 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 EVI5LQ96CN4 794 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 PIH1D3Q9NQM4 214 aaKnown RBP19.65■□□□□ 0.74
VHL-203ENST00000477538 ABCF2Q9UG63 623 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 ECM29Q5VYK3 1845 aa19.65■□□□□ 0.74
VHL-203ENST00000477538 PSMD14O00487 310 aa19.64■□□□□ 0.73
VHL-203ENST00000477538 SDSP20132 328 aa19.64■□□□□ 0.73
VHL-203ENST00000477538 FKBP1AP62942 108 aaKnown RBP19.64■□□□□ 0.73
VHL-203ENST00000477538 CDK5RAP2Q96SN8 1893 aa19.64■□□□□ 0.73
VHL-203ENST00000477538 ZNF541Q9H0D2 1346 aa19.63■□□□□ 0.73
VHL-203ENST00000477538 VIL1P09327 827 aaKnown RBP19.63■□□□□ 0.73
VHL-203ENST00000477538 TNIP1Q15025 636 aa19.63■□□□□ 0.73
VHL-203ENST00000477538 KBTBD3Q8NAB2 608 aa19.63■□□□□ 0.73
VHL-203ENST00000477538 FSD1Q9BTV5 496 aa19.63■□□□□ 0.73
VHL-203ENST00000477538 MXD3Q9BW11 206 aa19.63■□□□□ 0.73
VHL-203ENST00000477538 LRP2BPQ9P2M1 347 aa19.63■□□□□ 0.73
VHL-203ENST00000477538 MYO3BQ8WXR4 1341 aa19.62■□□□□ 0.73
VHL-203ENST00000477538 IDH1O75874 414 aaKnown RBP19.62■□□□□ 0.73
VHL-203ENST00000477538 SPTY2D1Q68D10 685 aaPredicted RBP19.62■□□□□ 0.73
VHL-203ENST00000477538 ERICH6Q7L0X2 663 aa19.62■□□□□ 0.73
VHL-203ENST00000477538 CERS5Q8N5B7 392 aa19.62■□□□□ 0.73
VHL-203ENST00000477538 ZC3H4Q9UPT8 1303 aaKnown RBP19.61■□□□□ 0.73
VHL-203ENST00000477538 LDHBP07195 334 aaKnown RBP19.61■□□□□ 0.73
VHL-203ENST00000477538 PRDX5P30044 214 aa19.61■□□□□ 0.73
VHL-203ENST00000477538 GRIK5Q16478 980 aa19.61■□□□□ 0.73
VHL-203ENST00000477538 RSBN1LQ6PCB5 846 aaPredicted RBP19.61■□□□□ 0.73
VHL-203ENST00000477538 RAI14Q9P0K7 980 aa19.61■□□□□ 0.73
VHL-203ENST00000477538 RFX7Q2KHR2 1363 aa19.6■□□□□ 0.73
VHL-203ENST00000477538 MAP3K12Q12852 859 aa19.6■□□□□ 0.73
VHL-203ENST00000477538 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.6■□□□□ 0.73
VHL-203ENST00000477538 SUGT1Q9Y2Z0 365 aa19.6■□□□□ 0.73
VHL-203ENST00000477538 GJA3Q9Y6H8 435 aa19.6■□□□□ 0.73
VHL-203ENST00000477538 SCN4AP35499 1836 aa19.6■□□□□ 0.73
VHL-203ENST00000477538 DZIP1Q86YF9 867 aaKnown RBP19.59■□□□□ 0.73
VHL-203ENST00000477538 FOCADQ5VW36 1801 aa19.59■□□□□ 0.73
VHL-203ENST00000477538 MAST3O60307 1309 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms