RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 HSPA1LP34931 641 aa17.7■□□□□ 0.42
CLSTN1-205ENST00000477264 LAMA4Q16363 1823 aa17.7■□□□□ 0.42
CLSTN1-205ENST00000477264 HEG1Q9ULI3 1381 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 HOMER1Q86YM7 354 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 IQUBQ8NA54 791 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 GOLGA5Q8TBA6 731 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 YY1AP1Q9H869 796 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 SPATA31A5Q5VU36 1347 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 SPATA31A7Q8IWB4 1347 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 NPHP1O15259 732 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 ZRSR1Q15695 479 aaKnown RBP17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 JAKMIP3Q5VZ66 844 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 ARMCX5Q6P1M9 558 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 KRBA2Q6ZNG9 492 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 GPR161Q8N6U8 529 aaKnown RBP17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 SMARCC2Q8TAQ2 1214 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 EXOC4Q96A65 974 aa17.69■□□□□ 0.42
CLSTN1-205ENST00000477264 OAS2P29728 719 aaKnown RBP17.68■□□□□ 0.42
CLSTN1-205ENST00000477264 TMC6Q7Z403 805 aa17.68■□□□□ 0.42
CLSTN1-205ENST00000477264 NEK11Q8NG66 645 aa17.68■□□□□ 0.42
CLSTN1-205ENST00000477264 CHMP4CQ96CF2 233 aa17.68■□□□□ 0.42
CLSTN1-205ENST00000477264 FMNL2Q96PY5 1086 aa17.68■□□□□ 0.42
CLSTN1-205ENST00000477264 GOLPH3LQ9H4A5 285 aa17.68■□□□□ 0.42
CLSTN1-205ENST00000477264 GOLGA6L9A6NEM1 432 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 ADD1P35611 737 aaKnown RBP17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 TNNT3P45378 269 aaPredicted RBP17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 IRX3P78415 501 aaPredicted RBP17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 ZSCAN26Q16670 478 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 BEND3Q5T5X7 828 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 USPL1Q5W0Q7 1092 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 DNAAF4Q8WXU2 420 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 MPHOSPH8Q99549 860 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 CHPF2Q9P2E5 772 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 DTNBO60941 627 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 SMC2O95347 1197 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 DDB1Q16531 1140 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 LRRN4CLQ8ND94 238 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 DBF4Q9UBU7 674 aaPredicted RBP17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 TNS2Q63HR2 1409 aa17.67■□□□□ 0.42
CLSTN1-205ENST00000477264 A0A1W2PQ27 194 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 A0A1W2PQ64 194 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 A0A1W2PQD8 194 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 CC2D1AQ6P1N0 951 aaPredicted RBP17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 ILDR1Q86SU0 546 aaPredicted RBP17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 FSIP1Q8NA03 581 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 MRPS27Q92552 414 aaKnown RBP17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 ZNF496Q96IT1 587 aaPredicted RBP17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 FAM227BQ96M60 508 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 XPO4Q9C0E2 1151 aaKnown RBP17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 TMOD3Q9NYL9 352 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 POLR3GO15318 223 aaPredicted RBP17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 ZSCAN12O43309 604 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 JAK2O60674 1132 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 TBC1D8O95759 1140 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 GOLGA6L1Q8N7Z2 621 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 FBXO18Q8NFZ0 1043 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 SMARCE1Q969G3 411 aa17.66■□□□□ 0.42
CLSTN1-205ENST00000477264 CBFA2T2O43439 604 aa17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 MYO1BO43795 1136 aa17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 SNRPA1P09661 255 aaKnown RBP17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 NBPF7P0C2Y1 421 aaPredicted RBP17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 STK3Q13188 491 aa17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 SMC1AQ14683 1233 aaKnown RBP17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 BARGINQ6ZT62 677 aa17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 FNBP4Q8N3X1 1017 aaPredicted RBP17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 IFNKQ9P0W0 207 aa17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 LRP6O75581 1613 aa17.65■□□□□ 0.42
CLSTN1-205ENST00000477264 IVLP07476 585 aa17.64■□□□□ 0.42
CLSTN1-205ENST00000477264 AACSQ86V21 672 aa17.64■□□□□ 0.42
CLSTN1-205ENST00000477264 CCDC191Q8NCU4 936 aa17.64■□□□□ 0.42
CLSTN1-205ENST00000477264 ARFGAP3Q9NP61 516 aa17.64■□□□□ 0.42
CLSTN1-205ENST00000477264 TOGARAM1Q9Y4F4 1720 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 PRAMEF22A3QJZ6 481 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 MYO1CO00159 1063 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 IKBKBO14920 756 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 ALDH1L1O75891 902 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 CASQ1P31415 396 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 EVCP57679 992 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 VPS72Q15906 364 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 NOM1Q5C9Z4 860 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 TRIM65Q6PJ69 517 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 BCL9LQ86UU0 1499 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 FMR1NBQ8N0W7 255 aaPredicted RBP17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 MSL3Q8N5Y2 521 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 FSD1Q9BTV5 496 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 PHAXQ9H814 394 aaKnown RBP17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 USP21Q9UK80 565 aa17.64■□□□□ 0.41
CLSTN1-205ENST00000477264 C5P01031 1676 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 A0A0D9SFI3 127 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 NEK1Q96PY6 1258 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 PARP3Q9Y6F1 533 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 KAT6BQ8WYB5 2073 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 PFKFB2O60825 505 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 URI1O94763 535 aaPredicted RBP17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 HSP90B1P14625 803 aaKnown RBP17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 RABGGTAQ92696 567 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 TRERF1Q96PN7 1200 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 KIAA1468Q9P260 1216 aa17.63■□□□□ 0.41
CLSTN1-205ENST00000477264 U3KPZ7 1027 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms