RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 IGHMBP2P38935 993 aaKnown RBP14.64□□□□□ -0.07
BRCA1-213ENST00000476777 GNAI1P63096 354 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 CAP1Q01518 475 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 CRHR2Q13324 411 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 DLGAP5Q15398 846 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 KSR2Q6VAB6 950 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 PI4KAP1Q8N8J0 262 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 MTMR14Q8NCE2 650 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 CD99L2Q8TCZ2 262 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.64□□□□□ -0.07
BRCA1-213ENST00000476777 PPP2R3BQ9Y5P8 575 aa14.64□□□□□ -0.07
BRCA1-213ENST00000476777 CUL9Q8IWT3 2517 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 LAMB1P07942 1786 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 H7C1W4 665 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 GJA5P36382 358 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 CCDC30Q5VVM6 783 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 CERS5Q8N5B7 392 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 ANKRD2Q9GZV1 360 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 EFCC1Q9HA90 598 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 CD209Q9NNX6 404 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 PCDHAC2Q9Y5I4 1007 aa14.63□□□□□ -0.07
BRCA1-213ENST00000476777 NEURL1BA8MQ27 555 aa14.62□□□□□ -0.07
BRCA1-213ENST00000476777 CWF19L2Q2TBE0 894 aaKnown RBP14.62□□□□□ -0.07
BRCA1-213ENST00000476777 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
BRCA1-213ENST00000476777 UBE3BQ7Z3V4 1068 aa14.62□□□□□ -0.07
BRCA1-213ENST00000476777 PTPN18Q99952 460 aa14.62□□□□□ -0.07
BRCA1-213ENST00000476777 IRS2Q9Y4H2 1338 aa14.62□□□□□ -0.07
BRCA1-213ENST00000476777 TESPA1A2RU30 521 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-213ENST00000476777 USP2O75604 605 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-213ENST00000476777 ITGA6P23229 1130 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 SP3Q02447 781 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 NEXNQ0ZGT2 675 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 SUPT20HL1Q3ZLR7 823 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 NBPF12Q5TAG4 269 aaPredicted RBP14.61□□□□□ -0.07
BRCA1-213ENST00000476777 TSPYL6Q8N831 410 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 PLA2G12BQ9BX93 195 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 CHMP4AQ9BY43 222 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 AOX1Q06278 1338 aa14.61□□□□□ -0.07
BRCA1-213ENST00000476777 CLRN2A0PK11 232 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 SPDYE2BA6NHP3 402 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 SLC4A2P04920 1241 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 SPDYE6P0CI01 402 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 KCNJ4P48050 445 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 IREB2P48200 963 aaKnown RBP14.6□□□□□ -0.07
BRCA1-213ENST00000476777 CALD1Q05682 793 aaKnown RBP14.6□□□□□ -0.07
BRCA1-213ENST00000476777 CHRNDQ07001 517 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 CFAP100Q494V2 611 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 ZNF333Q96JL9 665 aa14.6□□□□□ -0.07
BRCA1-213ENST00000476777 PRMT6Q96LA8 375 aaPredicted RBP14.6□□□□□ -0.07
BRCA1-213ENST00000476777 ECM29Q5VYK3 1845 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 SNAP23O00161 211 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 APAF1O14727 1248 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 MYO1BO43795 1136 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 CSF1RP07333 972 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 C15orf52Q6ZUT6 534 aaKnown RBP14.59□□□□□ -0.07
BRCA1-213ENST00000476777 ANKRD13AQ8IZ07 590 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 TMEM106CQ9BVX2 250 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 VEZTQ9HBM0 779 aa14.59□□□□□ -0.07
BRCA1-213ENST00000476777 COLQQ9Y215 455 aaPredicted RBP14.59□□□□□ -0.07
BRCA1-213ENST00000476777 F8W031 263 aaPredicted RBP14.58□□□□□ -0.08
BRCA1-213ENST00000476777 IL1R1P14778 569 aa14.58□□□□□ -0.08
BRCA1-213ENST00000476777 CASP7P55210 303 aa14.58□□□□□ -0.08
BRCA1-213ENST00000476777 GCKRQ14397 625 aa14.58□□□□□ -0.08
BRCA1-213ENST00000476777 MS4A4AQ96JQ5 239 aa14.58□□□□□ -0.08
BRCA1-213ENST00000476777 TAF5LO75529 589 aa14.57□□□□□ -0.08
BRCA1-213ENST00000476777 FKBP1AP62942 108 aaKnown RBP14.57□□□□□ -0.08
BRCA1-213ENST00000476777 RASA3Q14644 834 aa14.57□□□□□ -0.08
BRCA1-213ENST00000476777 G2E3Q7L622 706 aa14.57□□□□□ -0.08
BRCA1-213ENST00000476777 SLC9C1Q4G0N8 1177 aa14.56□□□□□ -0.08
BRCA1-213ENST00000476777 HELBQ8NG08 1087 aaPredicted RBP14.56□□□□□ -0.08
BRCA1-213ENST00000476777 BRI3BPQ8WY22 251 aa14.56□□□□□ -0.08
BRCA1-213ENST00000476777 OPTNQ96CV9 577 aa14.56□□□□□ -0.08
BRCA1-213ENST00000476777 STK31Q9BXU1 1019 aa14.56□□□□□ -0.08
BRCA1-213ENST00000476777 ELP3Q9H9T3 547 aa14.56□□□□□ -0.08
BRCA1-213ENST00000476777 JAG2Q9Y219 1238 aa14.56□□□□□ -0.08
BRCA1-213ENST00000476777 PTCH2Q9Y6C5 1203 aa14.56□□□□□ -0.08
BRCA1-213ENST00000476777 OTOFQ9HC10 1997 aa14.55□□□□□ -0.08
BRCA1-213ENST00000476777 ZNF804AQ7Z570 1209 aa14.55□□□□□ -0.08
BRCA1-213ENST00000476777 NBPF11Q86T75 865 aa14.55□□□□□ -0.08
BRCA1-213ENST00000476777 COL6A3P12111 3177 aa14.54□□□□□ -0.08
BRCA1-213ENST00000476777 LAMA3Q16787 3333 aa14.54□□□□□ -0.08
BRCA1-213ENST00000476777 ANKRD18BA2A2Z9 1011 aa14.54□□□□□ -0.08
BRCA1-213ENST00000476777 RBM5P52756 815 aaKnown RBP eCLIP14.54□□□□□ -0.08
BRCA1-213ENST00000476777 DDX10Q13206 875 aaKnown RBP14.54□□□□□ -0.08
BRCA1-213ENST00000476777 ARHGEF6Q15052 776 aa14.54□□□□□ -0.08
BRCA1-213ENST00000476777 TAF1CQ15572 869 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-213ENST00000476777 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
BRCA1-213ENST00000476777 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-213ENST00000476777 TEPSINQ96N21 525 aa14.54□□□□□ -0.08
BRCA1-213ENST00000476777 ZNF70Q9UC06 446 aaPredicted RBP14.54□□□□□ -0.08
BRCA1-213ENST00000476777 H0YGN5 161 aa14.53□□□□□ -0.08
BRCA1-213ENST00000476777 TNFAIP1Q13829 316 aa14.53□□□□□ -0.08
BRCA1-213ENST00000476777 SLC4A8Q2Y0W8 1093 aa14.53□□□□□ -0.08
BRCA1-213ENST00000476777 CDAN1Q8IWY9 1227 aa14.53□□□□□ -0.08
BRCA1-213ENST00000476777 FAM43AQ8N2R8 423 aa14.53□□□□□ -0.08
BRCA1-213ENST00000476777 TSR2Q969E8 191 aaKnown RBP14.53□□□□□ -0.08
BRCA1-213ENST00000476777 OTUD5Q96G74 571 aa14.53□□□□□ -0.08
BRCA1-213ENST00000476777 ZFYVE28Q9HCC9 887 aa14.53□□□□□ -0.08
BRCA1-213ENST00000476777 CCL15-CCL14A0A0B4J2E2 113 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 109.2 ms