RNA–Protein interactions for RNA: ENST00000476613.1

IRF1-209, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-209ENST00000476613 MS4A4AQ96JQ5 239 aa10.4□□□□□ -0.74
IRF1-209ENST00000476613 HTATIP2Q9BUP3 242 aa10.4□□□□□ -0.74
IRF1-209ENST00000476613 ANKRD2Q9GZV1 360 aa10.4□□□□□ -0.74
IRF1-209ENST00000476613 ZCCHC17Q9NP64 241 aaKnown RBP10.4□□□□□ -0.74
IRF1-209ENST00000476613 CENPFP49454 3210 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 CAPN2P17655 700 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 GTF2A2P52657 109 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 GTF2IP78347 998 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 KIF22Q14807 665 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 TTLL11Q8NHH1 800 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 DPF3Q92784 378 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 MYD88Q99836 296 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 CHMP4AQ9BY43 222 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 FZD1Q9UP38 647 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 TRIM35Q9UPQ4 493 aa10.39□□□□□ -0.75
IRF1-209ENST00000476613 ECM29Q5VYK3 1845 aa10.38□□□□□ -0.75
IRF1-209ENST00000476613 WTIPA6NIX2 430 aaPredicted RBP10.38□□□□□ -0.75
IRF1-209ENST00000476613 DDX58O95786 925 aaKnown RBP10.38□□□□□ -0.75
IRF1-209ENST00000476613 TNFAIP1Q13829 316 aa10.38□□□□□ -0.75
IRF1-209ENST00000476613 TAF1CQ15572 869 aaPredicted RBP10.38□□□□□ -0.75
IRF1-209ENST00000476613 NBPF12Q5TAG4 269 aaPredicted RBP10.38□□□□□ -0.75
IRF1-209ENST00000476613 DUSP27Q5VZP5 1158 aa10.38□□□□□ -0.75
IRF1-209ENST00000476613 TXNRD3Q86VQ6 643 aa10.38□□□□□ -0.75
IRF1-209ENST00000476613 OPTNQ96CV9 577 aa10.38□□□□□ -0.75
IRF1-209ENST00000476613 CCDC85AQ96PX6 553 aaPredicted RBP10.38□□□□□ -0.75
IRF1-209ENST00000476613 METTL22Q9BUU2 404 aaPredicted RBP10.38□□□□□ -0.75
IRF1-209ENST00000476613 NR2E3Q9Y5X4 410 aa10.38□□□□□ -0.75
IRF1-209ENST00000476613 SPDYE2BA6NHP3 402 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 APAF1O14727 1248 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 TLR2O60603 784 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 SPDYE6P0CI01 402 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 IGHMBP2P38935 993 aaKnown RBP10.37□□□□□ -0.75
IRF1-209ENST00000476613 NEUROD2Q15784 382 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 GPR153Q6NV75 609 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 C15orf52Q6ZUT6 534 aaKnown RBP10.37□□□□□ -0.75
IRF1-209ENST00000476613 UBE2Q1Q7Z7E8 422 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 HELBQ8NG08 1087 aaPredicted RBP10.37□□□□□ -0.75
IRF1-209ENST00000476613 CD209Q9NNX6 404 aa10.37□□□□□ -0.75
IRF1-209ENST00000476613 LAS1LQ9Y4W2 734 aaKnown RBP10.37□□□□□ -0.75
IRF1-209ENST00000476613 SZT2Q5T011 3432 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 CCL15-CCL14A0A0B4J2E2 113 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 CCER2I3L3R5 266 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 GJA8P48165 433 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 LACTBP83111 547 aaPredicted RBP10.36□□□□□ -0.75
IRF1-209ENST00000476613 CALD1Q05682 793 aaKnown RBP10.36□□□□□ -0.75
IRF1-209ENST00000476613 RASA3Q14644 834 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 CCL15Q16663 113 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 CCDC27Q2M243 656 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 CFAP100Q494V2 611 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 SH3TC2Q8TF17 1288 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 BRI3BPQ8WY22 251 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 GREM2Q9H772 168 aa10.36□□□□□ -0.75
IRF1-209ENST00000476613 PHAXQ9H814 394 aaKnown RBP10.36□□□□□ -0.75
IRF1-209ENST00000476613 GJB1P08034 283 aa10.35□□□□□ -0.75
IRF1-209ENST00000476613 HOXD10P28358 340 aa10.35□□□□□ -0.75
IRF1-209ENST00000476613 CERS5Q8N5B7 392 aa10.35□□□□□ -0.75
IRF1-209ENST00000476613 SHISA4Q96DD7 197 aa10.35□□□□□ -0.75
IRF1-209ENST00000476613 PRMT6Q96LA8 375 aaPredicted RBP10.35□□□□□ -0.75
IRF1-209ENST00000476613 ELP3Q9H9T3 547 aa10.35□□□□□ -0.75
IRF1-209ENST00000476613 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.35□□□□□ -0.75
IRF1-209ENST00000476613 CLRN2A0PK11 232 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 CETPP11597 493 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 IL1R1P14778 569 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 MAP3K9P80192 1104 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.34□□□□□ -0.75
IRF1-209ENST00000476613 FAM43AQ8N2R8 423 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 MPHOSPH8Q99549 860 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 PLA2G12BQ9BX93 195 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 VEZTQ9HBM0 779 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 CSADQ9Y600 493 aa10.34□□□□□ -0.75
IRF1-209ENST00000476613 IRS2Q9Y4H2 1338 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 MYH3P11055 1940 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 SPDYE5A6NIY4 337 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 ZBTB7BO15156 539 aaPredicted RBP10.33□□□□□ -0.76
IRF1-209ENST00000476613 ZNF853P0CG23 659 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 KLRK1P26718 216 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 KCNJ4P48050 445 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 NEXNQ0ZGT2 675 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 VGLL4Q14135 290 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 DIEXFQ68CQ4 756 aaKnown RBP10.33□□□□□ -0.76
IRF1-209ENST00000476613 KSR2Q6VAB6 950 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.33□□□□□ -0.76
IRF1-209ENST00000476613 JARID2Q92833 1246 aaPredicted RBP10.33□□□□□ -0.76
IRF1-209ENST00000476613 TRIM47Q96LD4 638 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 SRRDQ9UH36 339 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 SERPINA10Q9UK55 444 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 TRIOBPQ9H2D6 2365 aa10.33□□□□□ -0.76
IRF1-209ENST00000476613 H7C1W4 665 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 MYCP01106 439 aaPredicted RBP10.32□□□□□ -0.76
IRF1-209ENST00000476613 IGKV5-2P06315 115 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 CSF1RP07333 972 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 ITGA6P23229 1130 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 GRK4P32298 578 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 TNNI2P48788 182 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 GNAI1P63096 354 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 UBXN2AP68543 259 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 CHRNDQ07001 517 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 MTFR1Q15390 333 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 SPDYE2Q495Y8 402 aa10.32□□□□□ -0.76
IRF1-209ENST00000476613 CCDC30Q5VVM6 783 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms