RNA–Protein interactions for RNA: ENST00000476553.1

NUP58-209, Transcript of nucleoporin 58, humanhuman

TSL 4

Gene NUP58, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-209ENST00000476553 TMEM63CQ9P1W3 806 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 KANSL3Q9P2N6 904 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 SALL4Q9UJQ4 1053 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 SOX13Q9UN79 622 aa10.09□□□□□ -0.79
NUP58-209ENST00000476553 JUNBP17275 347 aaPredicted RBP10.08□□□□□ -0.8
NUP58-209ENST00000476553 LCE4AQ5TA78 99 aa10.08□□□□□ -0.8
NUP58-209ENST00000476553 METTL22Q9BUU2 404 aaPredicted RBP10.08□□□□□ -0.8
NUP58-209ENST00000476553 ZBTB39O15060 712 aa10.07□□□□□ -0.8
NUP58-209ENST00000476553 ACPPP15309 386 aa10.07□□□□□ -0.8
NUP58-209ENST00000476553 SHISA5Q8N114 240 aa10.07□□□□□ -0.8
NUP58-209ENST00000476553 SMG8Q8ND04 991 aaKnown RBP10.07□□□□□ -0.8
NUP58-209ENST00000476553 SLC7A3Q8WY07 619 aa10.07□□□□□ -0.8
NUP58-209ENST00000476553 ELP3Q9H9T3 547 aa10.07□□□□□ -0.8
NUP58-209ENST00000476553 DZANK1Q9NVP4 752 aa10.07□□□□□ -0.8
NUP58-209ENST00000476553 ZMIZ1Q9ULJ6 1067 aa10.07□□□□□ -0.8
NUP58-209ENST00000476553 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.07□□□□□ -0.8
NUP58-209ENST00000476553 C19orf57Q0VDD7 668 aa10.06□□□□□ -0.8
NUP58-209ENST00000476553 HGSNATQ68CP4 663 aa10.06□□□□□ -0.8
NUP58-209ENST00000476553 CXXC1Q9P0U4 656 aaPredicted RBP10.06□□□□□ -0.8
NUP58-209ENST00000476553 CNTN3Q9P232 1028 aa10.06□□□□□ -0.8
NUP58-209ENST00000476553 TP53INP2Q8IXH6 220 aa10.05□□□□□ -0.8
NUP58-209ENST00000476553 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
NUP58-209ENST00000476553 MKNK1Q9BUB5 465 aa10.05□□□□□ -0.8
NUP58-209ENST00000476553 BSDC1Q9NW68 430 aaPredicted RBP10.05□□□□□ -0.8
NUP58-209ENST00000476553 STIM2Q9P246 746 aa10.05□□□□□ -0.8
NUP58-209ENST00000476553 FAM95CA0A1B0GW59 222 aa10.04□□□□□ -0.8
NUP58-209ENST00000476553 PDE2AO00408 941 aaPredicted RBP10.04□□□□□ -0.8
NUP58-209ENST00000476553 RFX1P22670 979 aa10.04□□□□□ -0.8
NUP58-209ENST00000476553 RXRBP28702 533 aa10.04□□□□□ -0.8
NUP58-209ENST00000476553 NUTM2GQ5VZR2 741 aa10.04□□□□□ -0.8
NUP58-209ENST00000476553 HHIPQ96QV1 700 aa10.04□□□□□ -0.8
NUP58-209ENST00000476553 LOC100289279A0A1B0GTE1 492 aa10.03□□□□□ -0.8
NUP58-209ENST00000476553 ELOAQ14241 798 aaKnown RBP10.03□□□□□ -0.8
NUP58-209ENST00000476553 ARL4DP49703 201 aa10.02□□□□□ -0.81
NUP58-209ENST00000476553 CDCA8Q53HL2 280 aa10.02□□□□□ -0.81
NUP58-209ENST00000476553 PAOXQ6QHF9 649 aa10.02□□□□□ -0.81
NUP58-209ENST00000476553 ZNF438Q7Z4V0 828 aa10.02□□□□□ -0.81
NUP58-209ENST00000476553 C12orf50Q8NA57 414 aaPredicted RBP10.02□□□□□ -0.81
NUP58-209ENST00000476553 NUDT16Q96DE0 195 aaKnown RBP10.02□□□□□ -0.81
NUP58-209ENST00000476553 CYP4F12Q9HCS2 524 aa10.02□□□□□ -0.81
NUP58-209ENST00000476553 PAK6Q9NQU5 681 aaPredicted RBP10.02□□□□□ -0.81
NUP58-209ENST00000476553 ADMP35318 185 aa10.01□□□□□ -0.81
NUP58-209ENST00000476553 NAA30Q147X3 362 aaPredicted RBP10.01□□□□□ -0.81
NUP58-209ENST00000476553 CDPF1Q6NVV7 123 aa10.01□□□□□ -0.81
NUP58-209ENST00000476553 ZAR1Q86SH2 424 aa10.01□□□□□ -0.81
NUP58-209ENST00000476553 AGBL5Q8NDL9 886 aa10.01□□□□□ -0.81
NUP58-209ENST00000476553 STK32AQ8WU08 396 aa10.01□□□□□ -0.81
NUP58-209ENST00000476553 GATA6Q92908 595 aa10.01□□□□□ -0.81
NUP58-209ENST00000476553 CYP26A1O43174 497 aa10□□□□□ -0.81
NUP58-209ENST00000476553 PAPLNO95428 1278 aa10□□□□□ -0.81
NUP58-209ENST00000476553 DLGAP3O95886 979 aa10□□□□□ -0.81
NUP58-209ENST00000476553 VN1R5Q7Z5H4 357 aa10□□□□□ -0.81
NUP58-209ENST00000476553 TMEM102Q8N9M5 508 aaPredicted RBP10□□□□□ -0.81
NUP58-209ENST00000476553 C2CD4AQ8NCU7 369 aaPredicted RBP10□□□□□ -0.81
NUP58-209ENST00000476553 FLCNQ8NFG4 579 aa10□□□□□ -0.81
NUP58-209ENST00000476553 EZH1Q92800 747 aaPredicted RBP10□□□□□ -0.81
NUP58-209ENST00000476553 PRKAG2Q9UGJ0 569 aa10□□□□□ -0.81
NUP58-209ENST00000476553 SOX1O00570 391 aaPredicted RBP9.99□□□□□ -0.81
NUP58-209ENST00000476553 TRPA1O75762 1119 aa9.99□□□□□ -0.81
NUP58-209ENST00000476553 NFKBIBQ15653 356 aa9.99□□□□□ -0.81
NUP58-209ENST00000476553 XKR5Q6UX68 686 aa9.99□□□□□ -0.81
NUP58-209ENST00000476553 C1orf127Q8N9H9 656 aa9.99□□□□□ -0.81
NUP58-209ENST00000476553 FBLIM1Q8WUP2 373 aa9.99□□□□□ -0.81
NUP58-209ENST00000476553 USP26Q9BXU7 913 aa9.99□□□□□ -0.81
NUP58-209ENST00000476553 SOX17Q9H6I2 414 aaPredicted RBP9.99□□□□□ -0.81
NUP58-209ENST00000476553 CES1P23141 567 aa9.98□□□□□ -0.81
NUP58-209ENST00000476553 IKBKEQ14164 716 aa9.97□□□□□ -0.81
NUP58-209ENST00000476553 BSNDQ8WZ55 320 aa9.97□□□□□ -0.81
NUP58-209ENST00000476553 TBC1D32Q96NH3 1257 aa9.97□□□□□ -0.81
NUP58-209ENST00000476553 CHRDQ9H2X0 955 aa9.97□□□□□ -0.81
NUP58-209ENST00000476553 FAM170BA6NMN3 283 aa9.96□□□□□ -0.82
NUP58-209ENST00000476553 SUPT5HO00267 1087 aaKnown RBP9.96□□□□□ -0.82
NUP58-209ENST00000476553 DRD2P14416 443 aa9.96□□□□□ -0.82
NUP58-209ENST00000476553 RPLP1P05386 114 aaKnown RBP9.95□□□□□ -0.82
NUP58-209ENST00000476553 USP11P51784 963 aa9.95□□□□□ -0.82
NUP58-209ENST00000476553 NXPE3Q969Y0 559 aa9.95□□□□□ -0.82
NUP58-209ENST00000476553 EXOSC6Q5RKV6 272 aaKnown RBP9.94□□□□□ -0.82
NUP58-209ENST00000476553 ATCAYQ86WG3 371 aa9.94□□□□□ -0.82
NUP58-209ENST00000476553 WFDC3Q8IUB2 231 aa9.94□□□□□ -0.82
NUP58-209ENST00000476553 ZKSCAN3Q9BRR0 538 aa9.94□□□□□ -0.82
NUP58-209ENST00000476553 NRSN2Q9GZP1 204 aa9.94□□□□□ -0.82
NUP58-209ENST00000476553 ZC3H7BQ9UGR2 993 aaKnown RBP9.94□□□□□ -0.82
NUP58-209ENST00000476553 SOX4Q06945 474 aaPredicted RBP9.93□□□□□ -0.82
NUP58-209ENST00000476553 NPM2Q86SE8 214 aaKnown RBP9.93□□□□□ -0.82
NUP58-209ENST00000476553 YIPF2Q9BWQ6 316 aa9.93□□□□□ -0.82
NUP58-209ENST00000476553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.93□□□□□ -0.82
NUP58-209ENST00000476553 BHLHE41Q9C0J9 482 aaPredicted RBP9.92□□□□□ -0.82
NUP58-209ENST00000476553 ESRRAP11474 423 aaPredicted RBP9.91□□□□□ -0.82
NUP58-209ENST00000476553 ADH5P11766 374 aa9.91□□□□□ -0.82
NUP58-209ENST00000476553 ZNF648Q5T619 568 aaPredicted RBP9.91□□□□□ -0.82
NUP58-209ENST00000476553 SPOCD1Q6ZMY3 1216 aa9.91□□□□□ -0.82
NUP58-209ENST00000476553 CLP1Q92989 425 aaKnown RBP9.91□□□□□ -0.82
NUP58-209ENST00000476553 OSMRQ99650 979 aa9.91□□□□□ -0.82
NUP58-209ENST00000476553 EDEM1Q92611 657 aa9.9□□□□□ -0.82
NUP58-209ENST00000476553 PMEPA1Q969W9 287 aa9.9□□□□□ -0.82
NUP58-209ENST00000476553 GGNBP2Q9H3C7 697 aa9.9□□□□□ -0.82
NUP58-209ENST00000476553 CARMIL2Q6F5E8 1435 aa9.9□□□□□ -0.83
NUP58-209ENST00000476553 TMEM164Q5U3C3 297 aa9.89□□□□□ -0.83
NUP58-209ENST00000476553 ZNF765Q7L2R6 523 aa9.89□□□□□ -0.83
NUP58-209ENST00000476553 KRTAP4-11Q9BYQ6 195 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms