RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 PCBP4P57723 403 aaKnown RBP6□□□□□ -1.45
VPS13D-207ENST00000476169 CCDC144BQ3MJ40 725 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 RPS26P11Q5JNZ5 115 aaPredicted RBP6□□□□□ -1.45
VPS13D-207ENST00000476169 CEP135Q66GS9 1140 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 ZNF662Q6ZS27 426 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 FAM35AQ86V20 835 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 MICALL1Q8N3F8 863 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 PHC3Q8NDX5 983 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 RASGRP4Q8TDF6 673 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 ZNF296Q8WUU4 475 aaPredicted RBP6□□□□□ -1.45
VPS13D-207ENST00000476169 RHOVQ96L33 236 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 NECAB3Q96P71 396 aaPredicted RBP6□□□□□ -1.45
VPS13D-207ENST00000476169 SEC31BQ9NQW1 1179 aa6□□□□□ -1.45
VPS13D-207ENST00000476169 C2CD2LO14523 706 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 ENC1O14682 589 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 FAM160A1Q05DH4 1040 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 SNAP47Q5SQN1 464 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 TTBK2Q6IQ55 1244 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 BSNDQ8WZ55 320 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 PLD4Q96BZ4 506 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 SEC16BQ96JE7 1060 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 POP1Q99575 1024 aaKnown RBP5.99□□□□□ -1.45
VPS13D-207ENST00000476169 IRX2Q9BZI1 471 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-207ENST00000476169 MUC3BQ9H195 1237 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 SLC6A14Q9UN76 642 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.99□□□□□ -1.45
VPS13D-207ENST00000476169 TLR6Q9Y2C9 796 aa5.99□□□□□ -1.45
VPS13D-207ENST00000476169 SUPT16HQ9Y5B9 1047 aaKnown RBP5.99□□□□□ -1.45
VPS13D-207ENST00000476169 ARID4BQ4LE39 1312 aaPredicted RBP5.99□□□□□ -1.45
VPS13D-207ENST00000476169 PF4P02776 101 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 PTPRAP18433 802 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 MX2P20592 715 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 LMNB2Q03252 620 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 PPP2R3AQ06190 1150 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 FAAP100Q0VG06 881 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 NANOS1Q8WY41 292 aaKnown RBP5.98□□□□□ -1.45
VPS13D-207ENST00000476169 EAF1Q96JC9 268 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-207ENST00000476169 CLEC4MQ9H2X3 399 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-207ENST00000476169 ZSWIM4Q9H7M6 989 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 AVENQ9NQS1 362 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-207ENST00000476169 TMEM39AQ9NV64 488 aa5.98□□□□□ -1.45
VPS13D-207ENST00000476169 TTBK1Q5TCY1 1321 aaPredicted RBP5.98□□□□□ -1.45
VPS13D-207ENST00000476169 TLDC2A0PJX2 215 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 FAM177BA6PVY3 158 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 PAGE1O75459 146 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 SSBP05455 408 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS13D-207ENST00000476169 LMNB1P20700 586 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 ADH6P28332 368 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 ADH7P40394 386 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 NASPP49321 788 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-207ENST00000476169 ZNF157P51786 506 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-207ENST00000476169 RPS26P62854 115 aaKnown RBP5.97□□□□□ -1.45
VPS13D-207ENST00000476169 PCDH1Q08174 1060 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 CAMK2GQ13555 558 aaPredicted RBP5.97□□□□□ -1.45
VPS13D-207ENST00000476169 PERM1Q5SV97 790 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 SOGA3Q5TF21 947 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 PCNX4Q63HM2 1172 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 FBXL19Q6PCT2 694 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 ELMSAN1Q6PJG2 1045 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 AGMOQ6ZNB7 445 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 GOLM1Q8NBJ4 401 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 TNFRSF25Q93038 417 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 NT5C1AQ9BXI3 368 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 SMG9Q9H0W8 520 aaKnown RBP5.97□□□□□ -1.45
VPS13D-207ENST00000476169 KCNQ5Q9NR82 932 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 EFR3BQ9Y2G0 817 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 SAMM50Q9Y512 469 aa5.97□□□□□ -1.45
VPS13D-207ENST00000476169 ARAFP10398 606 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 TFE3P19532 575 aaPredicted RBP5.96□□□□□ -1.46
VPS13D-207ENST00000476169 GARTP22102 1010 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 RBL2Q08999 1139 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 APOBRQ0VD83 1088 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 SDE2Q6IQ49 451 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 NOL8Q76FK4 1167 aaKnown RBP5.96□□□□□ -1.46
VPS13D-207ENST00000476169 LACRTQ9GZZ8 138 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 GINM1Q9NU53 330 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 UBP1Q9NZI7 540 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 NAGPAQ9UK23 515 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 SOX13Q9UN79 622 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 NSFL1CQ9UNZ2 370 aaKnown RBP5.96□□□□□ -1.46
VPS13D-207ENST00000476169 TRIM33Q9UPN9 1127 aa5.96□□□□□ -1.46
VPS13D-207ENST00000476169 GREM1O60565 184 aa5.95□□□□□ -1.46
VPS13D-207ENST00000476169 B3GALT4O96024 378 aa5.95□□□□□ -1.46
VPS13D-207ENST00000476169 NFX1Q12986 1120 aaKnown RBP5.95□□□□□ -1.46
VPS13D-207ENST00000476169 NKD1Q969G9 470 aa5.95□□□□□ -1.46
VPS13D-207ENST00000476169 ADAM19Q9H013 955 aa5.95□□□□□ -1.46
VPS13D-207ENST00000476169 KLF15Q9UIH9 416 aa5.95□□□□□ -1.46
VPS13D-207ENST00000476169 NEURL1BA8MQ27 555 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 ADARB2-AS1A8MUL3 147 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 NME2P22392 152 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 MAP2K3P46734 347 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 SOX9P48436 509 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 COL9A2Q14055 689 aaPredicted RBP5.94□□□□□ -1.46
VPS13D-207ENST00000476169 GAS6Q14393 721 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 ZNF423Q2M1K9 1284 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 VN1R5Q7Z5H4 357 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 CKAP2LQ8IYA6 745 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 CPLX3Q8WVH0 158 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 LPIN3Q9BQK8 851 aa5.94□□□□□ -1.46
VPS13D-207ENST00000476169 MIR1-1HGQ9H1L0 117 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms