RNA–Protein interactions for RNA: ENST00000476089.1

ITGA4-207, Transcript of integrin subunit alpha 4, humanhuman

TSL 2

Gene ITGA4, Length 1,846 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-207ENST00000476089 WTIPA6NIX2 430 aaPredicted RBP24.43■■□□□ 1.5
ITGA4-207ENST00000476089 SEMA3EO15041 775 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 GPAA1O43292 621 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 FRAT2O75474 233 aaPredicted RBP24.43■■□□□ 1.5
ITGA4-207ENST00000476089 CYP21A2P08686 494 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 CPA1P15085 419 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 FBXO33Q7Z6M2 555 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 WWC3Q9ULE0 1092 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 IQSEC3Q9UPP2 1182 aaPredicted RBP24.43■■□□□ 1.5
ITGA4-207ENST00000476089 LIMCH1Q9UPQ0 1083 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 LEMD3Q9Y2U8 911 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 PARP3Q9Y6F1 533 aa24.43■■□□□ 1.5
ITGA4-207ENST00000476089 MYO5AQ9Y4I1 1855 aaKnown RBP24.43■■□□□ 1.5
ITGA4-207ENST00000476089 HIBADHP31937 336 aaKnown RBP24.42■■□□□ 1.5
ITGA4-207ENST00000476089 EN1Q05925 392 aaPredicted RBP24.42■■□□□ 1.5
ITGA4-207ENST00000476089 SF3B2Q13435 895 aaKnown RBP24.42■■□□□ 1.5
ITGA4-207ENST00000476089 EZH2Q15910 746 aaKnown RBP24.42■■□□□ 1.5
ITGA4-207ENST00000476089 DOCK2Q92608 1830 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 BBOX1O75936 387 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 CUL4AQ13619 759 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 MAGEB6Q8N7X4 407 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 NEK1Q96PY6 1258 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 CAMKK2Q96RR4 588 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 BRIP1Q9BX63 1249 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 XDHP47989 1333 aa24.42■■□□□ 1.5
ITGA4-207ENST00000476089 KLRG2A4D1S0 409 aaPredicted RBP24.41■■□□□ 1.5
ITGA4-207ENST00000476089 HOXA10P31260 410 aaPredicted RBP24.41■■□□□ 1.5
ITGA4-207ENST00000476089 INTS4Q96HW7 963 aaKnown RBP24.41■■□□□ 1.5
ITGA4-207ENST00000476089 CRAMP1Q96RY5 1269 aa24.41■■□□□ 1.5
ITGA4-207ENST00000476089 STK32BQ9NY57 414 aa24.41■■□□□ 1.5
ITGA4-207ENST00000476089 TCRBV5S4A2TA0A5A2 114 aa24.4■■□□□ 1.5
ITGA4-207ENST00000476089 RPS6KB1P23443 525 aa24.4■■□□□ 1.5
ITGA4-207ENST00000476089 ANKRD1Q15327 319 aa24.4■■□□□ 1.5
ITGA4-207ENST00000476089 AIDAQ96BJ3 306 aa24.4■■□□□ 1.5
ITGA4-207ENST00000476089 MMP10P09238 476 aa24.4■■□□□ 1.5
ITGA4-207ENST00000476089 HMGB1P09429 215 aaKnown RBP24.4■■□□□ 1.5
ITGA4-207ENST00000476089 TAF6LQ9Y6J9 622 aa24.4■■□□□ 1.5
ITGA4-207ENST00000476089 SLC15A2Q16348 729 aa24.39■■□□□ 1.49
ITGA4-207ENST00000476089 IMMTQ16891 758 aaKnown RBP24.39■■□□□ 1.49
ITGA4-207ENST00000476089 ZSCAN31Q96LW9 406 aaPredicted RBP24.39■■□□□ 1.49
ITGA4-207ENST00000476089 ABCF2Q9UG63 623 aa24.39■■□□□ 1.49
ITGA4-207ENST00000476089 KLRK1P26718 216 aa24.38■■□□□ 1.49
ITGA4-207ENST00000476089 TMC4Q7Z404 712 aa24.38■■□□□ 1.49
ITGA4-207ENST00000476089 ZGPATQ8N5A5 531 aaKnown RBP24.38■■□□□ 1.49
ITGA4-207ENST00000476089 PDS5AQ29RF7 1337 aaKnown RBP24.38■■□□□ 1.49
ITGA4-207ENST00000476089 NUCB2P80303 420 aa24.38■■□□□ 1.49
ITGA4-207ENST00000476089 ALDH8A1Q9H2A2 487 aaPredicted RBP24.38■■□□□ 1.49
ITGA4-207ENST00000476089 RAI14Q9P0K7 980 aa24.38■■□□□ 1.49
ITGA4-207ENST00000476089 PDE6BP35913 854 aa24.37■■□□□ 1.49
ITGA4-207ENST00000476089 BAG6P46379 1132 aa24.37■■□□□ 1.49
ITGA4-207ENST00000476089 SH2B1Q9NRF2 756 aaPredicted RBP24.37■■□□□ 1.49
ITGA4-207ENST00000476089 NRXN2Q9P2S2 1712 aa24.37■■□□□ 1.49
ITGA4-207ENST00000476089 FGAP02671 866 aa24.36■■□□□ 1.49
ITGA4-207ENST00000476089 APPP05067 770 aa24.36■■□□□ 1.49
ITGA4-207ENST00000476089 RAB3GAP1Q15042 981 aa24.36■■□□□ 1.49
ITGA4-207ENST00000476089 NSFL1CQ9UNZ2 370 aaKnown RBP24.36■■□□□ 1.49
ITGA4-207ENST00000476089 ATP2B4P23634 1241 aa24.35■■□□□ 1.49
ITGA4-207ENST00000476089 MSL1Q68DK7 614 aa24.35■■□□□ 1.49
ITGA4-207ENST00000476089 STRBPQ96SI9 672 aaKnown RBP24.35■■□□□ 1.49
ITGA4-207ENST00000476089 LARP6Q9BRS8 491 aaKnown RBP24.35■■□□□ 1.49
ITGA4-207ENST00000476089 ANO8Q9HCE9 1232 aaPredicted RBP24.35■■□□□ 1.49
ITGA4-207ENST00000476089 MYH13Q9UKX3 1938 aa24.34■■□□□ 1.49
ITGA4-207ENST00000476089 ZBTB22O15209 634 aa24.34■■□□□ 1.49
ITGA4-207ENST00000476089 FOXP2O15409 715 aa24.34■■□□□ 1.49
ITGA4-207ENST00000476089 MBD4O95243 580 aa24.34■■□□□ 1.49
ITGA4-207ENST00000476089 GPSM2P81274 684 aa24.34■■□□□ 1.49
ITGA4-207ENST00000476089 TTLL5Q6EMB2 1281 aa24.34■■□□□ 1.49
ITGA4-207ENST00000476089 GGA1Q9UJY5 639 aa24.34■■□□□ 1.49
ITGA4-207ENST00000476089 COL1A1P02452 1464 aaPredicted RBP24.34■■□□□ 1.49
ITGA4-207ENST00000476089 E7EWF7 191 aa24.33■■□□□ 1.49
ITGA4-207ENST00000476089 ZNF213O14771 459 aa24.33■■□□□ 1.49
ITGA4-207ENST00000476089 NPR1P16066 1061 aa24.33■■□□□ 1.49
ITGA4-207ENST00000476089 GNAT2P19087 354 aa24.33■■□□□ 1.49
ITGA4-207ENST00000476089 CYP7A1P22680 504 aa24.33■■□□□ 1.49
ITGA4-207ENST00000476089 ZNF804AQ7Z570 1209 aa24.33■■□□□ 1.49
ITGA4-207ENST00000476089 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.33■■□□□ 1.49
ITGA4-207ENST00000476089 UFL1O94874 794 aa24.33■■□□□ 1.48
ITGA4-207ENST00000476089 C15orf52Q6ZUT6 534 aaKnown RBP24.33■■□□□ 1.48
ITGA4-207ENST00000476089 TXNRD3Q86VQ6 643 aa24.33■■□□□ 1.48
ITGA4-207ENST00000476089 ANKRD31Q8N7Z5 1873 aa24.32■■□□□ 1.48
ITGA4-207ENST00000476089 IRS2Q9Y4H2 1338 aa24.32■■□□□ 1.48
ITGA4-207ENST00000476089 PATL2C9JE40 543 aaKnown RBP24.32■■□□□ 1.48
ITGA4-207ENST00000476089 PPEF1O14829 653 aaPredicted RBP24.32■■□□□ 1.48
ITGA4-207ENST00000476089 SRGNP10124 158 aa24.32■■□□□ 1.48
ITGA4-207ENST00000476089 ALDH1B1P30837 517 aa24.32■■□□□ 1.48
ITGA4-207ENST00000476089 FGD1P98174 961 aa24.32■■□□□ 1.48
ITGA4-207ENST00000476089 CHAF1AQ13111 956 aaPredicted RBP24.32■■□□□ 1.48
ITGA4-207ENST00000476089 STOX1Q6ZVD7 989 aa24.32■■□□□ 1.48
ITGA4-207ENST00000476089 DHX32Q7L7V1 743 aaKnown RBP24.32■■□□□ 1.48
ITGA4-207ENST00000476089 TCEANC2Q96MN5 208 aa24.32■■□□□ 1.48
ITGA4-207ENST00000476089 TNPO1Q92973 898 aaKnown RBP24.31■■□□□ 1.48
ITGA4-207ENST00000476089 PODXL2Q9NZ53 605 aa24.31■■□□□ 1.48
ITGA4-207ENST00000476089 HAND2P61296 217 aa24.31■■□□□ 1.48
ITGA4-207ENST00000476089 SP8Q8IXZ3 490 aa24.31■■□□□ 1.48
ITGA4-207ENST00000476089 ARMT1Q9H993 441 aa24.31■■□□□ 1.48
ITGA4-207ENST00000476089 ALX1Q15699 326 aa24.3■■□□□ 1.48
ITGA4-207ENST00000476089 NAA16Q6N069 864 aaPredicted RBP24.3■■□□□ 1.48
ITGA4-207ENST00000476089 GBP4Q96PP9 640 aa24.3■■□□□ 1.48
ITGA4-207ENST00000476089 NACAP1Q9BZK3 213 aa24.3■■□□□ 1.48
ITGA4-207ENST00000476089 A0A0G2JLW4 131 aa24.29■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms