RNA–Protein interactions for RNA: ENST00000475524.1

MCF2L-224, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 604 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-224ENST00000475524 RASGRF1Q13972 1273 aa18.48■□□□□ 0.55
MCF2L-224ENST00000475524 HAUS7Q99871 368 aa18.48■□□□□ 0.55
MCF2L-224ENST00000475524 ZNRF3Q9ULT6 936 aa18.48■□□□□ 0.55
MCF2L-224ENST00000475524 AK9Q5TCS8 1911 aa18.48■□□□□ 0.55
MCF2L-224ENST00000475524 SALL1Q9NSC2 1324 aa18.48■□□□□ 0.55
MCF2L-224ENST00000475524 MCAMP43121 646 aa18.47■□□□□ 0.55
MCF2L-224ENST00000475524 TMED8Q6PL24 325 aaPredicted RBP18.47■□□□□ 0.55
MCF2L-224ENST00000475524 ZGPATQ8N5A5 531 aaKnown RBP18.47■□□□□ 0.55
MCF2L-224ENST00000475524 SPATA5Q8NB90 893 aa18.47■□□□□ 0.55
MCF2L-224ENST00000475524 WDR66Q8TBY9 1149 aa18.47■□□□□ 0.55
MCF2L-224ENST00000475524 TBC1D22AQ8WUA7 517 aa18.47■□□□□ 0.55
MCF2L-224ENST00000475524 MAST2Q6P0Q8 1798 aa18.47■□□□□ 0.55
MCF2L-224ENST00000475524 COL1A1P02452 1464 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-224ENST00000475524 FRAT2O75474 233 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-224ENST00000475524 PRELPP51888 382 aa18.46■□□□□ 0.55
MCF2L-224ENST00000475524 TTF1Q15361 905 aaPredicted RBP18.46■□□□□ 0.55
MCF2L-224ENST00000475524 STRIP1Q5VSL9 837 aa18.46■□□□□ 0.55
MCF2L-224ENST00000475524 DBNDD1Q9H9R9 158 aa18.46■□□□□ 0.55
MCF2L-224ENST00000475524 HMG20BQ9P0W2 317 aa18.46■□□□□ 0.55
MCF2L-224ENST00000475524 MYH7P12883 1935 aa18.46■□□□□ 0.55
MCF2L-224ENST00000475524 FZD9O00144 591 aa18.45■□□□□ 0.54
MCF2L-224ENST00000475524 DOK7Q18PE1 504 aa18.45■□□□□ 0.54
MCF2L-224ENST00000475524 TTC22Q5TAA0 569 aa18.45■□□□□ 0.54
MCF2L-224ENST00000475524 BCL11AQ9H165 835 aa18.45■□□□□ 0.54
MCF2L-224ENST00000475524 SUGT1Q9Y2Z0 365 aa18.45■□□□□ 0.54
MCF2L-224ENST00000475524 MYO3BQ8WXR4 1341 aa18.45■□□□□ 0.54
MCF2L-224ENST00000475524 USP17L3A6NCW0 530 aa18.44■□□□□ 0.54
MCF2L-224ENST00000475524 USP17L4A6NCW7 530 aa18.44■□□□□ 0.54
MCF2L-224ENST00000475524 SCARF1Q14162 830 aa18.44■□□□□ 0.54
MCF2L-224ENST00000475524 USP17L1Q7RTZ2 530 aa18.44■□□□□ 0.54
MCF2L-224ENST00000475524 BOLA2Q9H3K6 86 aa18.44■□□□□ 0.54
MCF2L-224ENST00000475524 RFX7Q2KHR2 1363 aa18.43■□□□□ 0.54
MCF2L-224ENST00000475524 YDJCA8MPS7 323 aa18.43■□□□□ 0.54
MCF2L-224ENST00000475524 MMP14P50281 582 aa18.43■□□□□ 0.54
MCF2L-224ENST00000475524 BMP2KLQ5H9B9 411 aa18.43■□□□□ 0.54
MCF2L-224ENST00000475524 TTLL5Q6EMB2 1281 aa18.43■□□□□ 0.54
MCF2L-224ENST00000475524 ZAP70P43403 619 aa18.42■□□□□ 0.54
MCF2L-224ENST00000475524 RGS3P49796 1198 aa18.42■□□□□ 0.54
MCF2L-224ENST00000475524 EIF6P56537 245 aaKnown RBP18.42■□□□□ 0.54
MCF2L-224ENST00000475524 TNIP1Q15025 636 aa18.42■□□□□ 0.54
MCF2L-224ENST00000475524 TSHZ3Q63HK5 1081 aa18.42■□□□□ 0.54
MCF2L-224ENST00000475524 SPTY2D1Q68D10 685 aaPredicted RBP18.42■□□□□ 0.54
MCF2L-224ENST00000475524 EVI5LQ96CN4 794 aa18.42■□□□□ 0.54
MCF2L-224ENST00000475524 PAG1Q9NWQ8 432 aa18.42■□□□□ 0.54
MCF2L-224ENST00000475524 RNF181Q9P0P0 153 aa18.42■□□□□ 0.54
MCF2L-224ENST00000475524 CYP2E1P05181 493 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-224ENST00000475524 VIL1P09327 827 aaKnown RBP18.41■□□□□ 0.54
MCF2L-224ENST00000475524 GTF2IP78347 998 aa18.41■□□□□ 0.54
MCF2L-224ENST00000475524 LRRFIP1Q32MZ4 808 aaKnown RBP18.41■□□□□ 0.54
MCF2L-224ENST00000475524 DACT2Q5SW24 774 aa18.41■□□□□ 0.54
MCF2L-224ENST00000475524 C9orf131Q5VYM1 1079 aa18.41■□□□□ 0.54
MCF2L-224ENST00000475524 CIAPIN1Q6FI81 312 aa18.41■□□□□ 0.54
MCF2L-224ENST00000475524 CNTROBQ8N137 903 aa18.41■□□□□ 0.54
MCF2L-224ENST00000475524 IQSEC3Q9UPP2 1182 aaPredicted RBP18.41■□□□□ 0.54
MCF2L-224ENST00000475524 MYO5AQ9Y4I1 1855 aaKnown RBP18.41■□□□□ 0.54
MCF2L-224ENST00000475524 RPS12P25398 132 aaKnown RBP18.4■□□□□ 0.54
MCF2L-224ENST00000475524 CXCL9Q07325 125 aa18.4■□□□□ 0.54
MCF2L-224ENST00000475524 PI16Q6UXB8 463 aa18.4■□□□□ 0.54
MCF2L-224ENST00000475524 KBTBD3Q8NAB2 608 aa18.4■□□□□ 0.54
MCF2L-224ENST00000475524 DNAJC2Q99543 621 aaKnown RBP18.4■□□□□ 0.54
MCF2L-224ENST00000475524 MAST3O60307 1309 aa18.4■□□□□ 0.54
MCF2L-224ENST00000475524 GSPT1P15170 499 aaKnown RBP18.39■□□□□ 0.53
MCF2L-224ENST00000475524 CHAF1AQ13111 956 aaPredicted RBP18.39■□□□□ 0.53
MCF2L-224ENST00000475524 MFSD14BQ5SR56 506 aa18.39■□□□□ 0.53
MCF2L-224ENST00000475524 AGBL3Q8NEM8 1001 aa18.39■□□□□ 0.53
MCF2L-224ENST00000475524 SNRKQ9NRH2 765 aa18.39■□□□□ 0.53
MCF2L-224ENST00000475524 GOLIM4O00461 696 aa18.38■□□□□ 0.53
MCF2L-224ENST00000475524 ZSCAN25Q6NSZ9 544 aa18.38■□□□□ 0.53
MCF2L-224ENST00000475524 RSBN1LQ6PCB5 846 aaPredicted RBP18.38■□□□□ 0.53
MCF2L-224ENST00000475524 GPC2Q8N158 579 aa18.38■□□□□ 0.53
MCF2L-224ENST00000475524 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.38■□□□□ 0.53
MCF2L-224ENST00000475524 PSMD14O00487 310 aa18.37■□□□□ 0.53
MCF2L-224ENST00000475524 LDHBP07195 334 aaKnown RBP18.37■□□□□ 0.53
MCF2L-224ENST00000475524 ZFYP08048 801 aaPredicted RBP18.37■□□□□ 0.53
MCF2L-224ENST00000475524 HDLBPQ00341 1268 aaKnown RBP18.37■□□□□ 0.53
MCF2L-224ENST00000475524 MAP3K12Q12852 859 aa18.37■□□□□ 0.53
MCF2L-224ENST00000475524 ERICH6Q7L0X2 663 aa18.37■□□□□ 0.53
MCF2L-224ENST00000475524 SKAP1Q86WV1 359 aa18.37■□□□□ 0.53
MCF2L-224ENST00000475524 GMLQ99445 158 aa18.37■□□□□ 0.53
MCF2L-224ENST00000475524 MRIQ9BWK5 157 aa18.37■□□□□ 0.53
MCF2L-224ENST00000475524 TRIM6-TRIM34B2RNG4 842 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 HIP1O00291 1037 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 RAD17O75943 681 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 SDSP20132 328 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 SLF2Q8IX21 1173 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 DPF2Q92785 391 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 ANTXR1Q9H6X2 564 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 PIH1D3Q9NQM4 214 aaKnown RBP18.36■□□□□ 0.53
MCF2L-224ENST00000475524 KCNQ5Q9NR82 932 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 LRP2BPQ9P2M1 347 aa18.36■□□□□ 0.53
MCF2L-224ENST00000475524 MYH2Q9UKX2 1941 aa18.35■□□□□ 0.53
MCF2L-224ENST00000475524 SRCAPQ6ZRS2 3230 aa18.35■□□□□ 0.53
MCF2L-224ENST00000475524 ZNF541Q9H0D2 1346 aa18.35■□□□□ 0.53
MCF2L-224ENST00000475524 GSTO1P78417 241 aa18.35■□□□□ 0.53
MCF2L-224ENST00000475524 CERS5Q8N5B7 392 aa18.35■□□□□ 0.53
MCF2L-224ENST00000475524 ABCF2Q9UG63 623 aa18.35■□□□□ 0.53
MCF2L-224ENST00000475524 PRDX5P30044 214 aa18.34■□□□□ 0.53
MCF2L-224ENST00000475524 UBE3CQ15386 1083 aa18.34■□□□□ 0.53
MCF2L-224ENST00000475524 DPY19L2Q6NUT2 758 aa18.34■□□□□ 0.53
MCF2L-224ENST00000475524 FBXW7Q969H0 707 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms