RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 NOP58Q9Y2X3 529 aaKnown RBP20.1■□□□□ 0.81
SRM-204ENST00000475189 SURF6O75683 361 aaKnown RBP20.09■□□□□ 0.81
SRM-204ENST00000475189 RBM26Q5T8P6 1007 aaKnown RBP20.09■□□□□ 0.81
SRM-204ENST00000475189 CERS5Q8N5B7 392 aa20.09■□□□□ 0.81
SRM-204ENST00000475189 PGAP2Q9UHJ9 254 aa20.09■□□□□ 0.81
SRM-204ENST00000475189 IQSEC3Q9UPP2 1182 aaPredicted RBP20.09■□□□□ 0.81
SRM-204ENST00000475189 ITGBL1O95965 494 aaPredicted RBP20.08■□□□□ 0.81
SRM-204ENST00000475189 TIMM10P62072 90 aa20.08■□□□□ 0.81
SRM-204ENST00000475189 FKBP1AP62942 108 aaKnown RBP20.08■□□□□ 0.81
SRM-204ENST00000475189 RPAP2Q8IXW5 612 aaPredicted RBP20.08■□□□□ 0.81
SRM-204ENST00000475189 AKAP2Q9Y2D5 859 aa20.08■□□□□ 0.81
SRM-204ENST00000475189 ADORA1P30542 326 aa20.07■□□□□ 0.8
SRM-204ENST00000475189 KIF4BQ2VIQ3 1234 aa20.07■□□□□ 0.8
SRM-204ENST00000475189 SIRT2Q8IXJ6 389 aa20.07■□□□□ 0.8
SRM-204ENST00000475189 CNTROBQ8N137 903 aa20.07■□□□□ 0.8
SRM-204ENST00000475189 ZC3H15Q8WU90 426 aaKnown RBP20.07■□□□□ 0.8
SRM-204ENST00000475189 MYOZ2Q9NPC6 264 aa20.07■□□□□ 0.8
SRM-204ENST00000475189 A0A1B0GUL7 405 aa20.06■□□□□ 0.8
SRM-204ENST00000475189 OS9Q13438 667 aaPredicted RBP20.06■□□□□ 0.8
SRM-204ENST00000475189 KIAA0825Q8IV33 1275 aa20.06■□□□□ 0.8
SRM-204ENST00000475189 PASKQ96RG2 1323 aa20.05■□□□□ 0.8
SRM-204ENST00000475189 FRAT2O75474 233 aaPredicted RBP20.05■□□□□ 0.8
SRM-204ENST00000475189 MMP14P50281 582 aa20.05■□□□□ 0.8
SRM-204ENST00000475189 CHAF1AQ13111 956 aaPredicted RBP20.05■□□□□ 0.8
SRM-204ENST00000475189 OGFOD1Q8N543 542 aa20.05■□□□□ 0.8
SRM-204ENST00000475189 PHKA1P46020 1223 aa20.04■□□□□ 0.8
SRM-204ENST00000475189 MFSD14BQ5SR56 506 aa20.04■□□□□ 0.8
SRM-204ENST00000475189 XAGE2Q96GT9 111 aa20.04■□□□□ 0.8
SRM-204ENST00000475189 GPR108Q9NPR9 543 aa20.04■□□□□ 0.8
SRM-204ENST00000475189 HDAC9Q9UKV0 1011 aa20.04■□□□□ 0.8
SRM-204ENST00000475189 TRPM7Q96QT4 1865 aa20.03■□□□□ 0.8
SRM-204ENST00000475189 F8W031 263 aaPredicted RBP20.03■□□□□ 0.8
SRM-204ENST00000475189 HMMRO75330 724 aa20.03■□□□□ 0.8
SRM-204ENST00000475189 APLP1P51693 650 aa20.03■□□□□ 0.8
SRM-204ENST00000475189 SCARF1Q14162 830 aa20.03■□□□□ 0.8
SRM-204ENST00000475189 CCDC102BQ68D86 513 aa20.03■□□□□ 0.8
SRM-204ENST00000475189 NEUROD6Q96NK8 337 aa20.03■□□□□ 0.8
SRM-204ENST00000475189 EXOC6BQ9Y2D4 811 aa20.03■□□□□ 0.8
SRM-204ENST00000475189 ASTN2O75129 1339 aaPredicted RBP20.02■□□□□ 0.8
SRM-204ENST00000475189 ZBTB22O15209 634 aa20.02■□□□□ 0.8
SRM-204ENST00000475189 TBC1D22AQ8WUA7 517 aa20.02■□□□□ 0.8
SRM-204ENST00000475189 GNL3LQ9NVN8 582 aaKnown RBP20.02■□□□□ 0.8
SRM-204ENST00000475189 COL1A1P02452 1464 aaPredicted RBP20.02■□□□□ 0.8
SRM-204ENST00000475189 FMR1Q06787 632 aaKnown RBP eCLIP20.01■□□□□ 0.79
SRM-204ENST00000475189 GRIK5Q16478 980 aa20.01■□□□□ 0.79
SRM-204ENST00000475189 NBPF9Q3BBW0 867 aa20.01■□□□□ 0.79
SRM-204ENST00000475189 TNNI3KQ59H18 835 aa20.01■□□□□ 0.79
SRM-204ENST00000475189 CRBNQ96SW2 442 aa20.01■□□□□ 0.79
SRM-204ENST00000475189 GLIS2Q9BZE0 524 aaPredicted RBP20.01■□□□□ 0.79
SRM-204ENST00000475189 FPGT-TNNI3KV9GXZ4 949 aa20.01■□□□□ 0.79
SRM-204ENST00000475189 ECM29Q5VYK3 1845 aa20.01■□□□□ 0.79
SRM-204ENST00000475189 TRAF5O00463 557 aa20■□□□□ 0.79
SRM-204ENST00000475189 WNT10BO00744 389 aa20■□□□□ 0.79
SRM-204ENST00000475189 CDC37L1Q7L3B6 337 aa20■□□□□ 0.79
SRM-204ENST00000475189 ZBED3Q96IU2 234 aaPredicted RBP20■□□□□ 0.79
SRM-204ENST00000475189 GGA3Q9NZ52 723 aa20■□□□□ 0.79
SRM-204ENST00000475189 SEMA3EO15041 775 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 HTRA3P83110 453 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 HSP90AB4PQ58FF6 505 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 USP48Q86UV5 1035 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 ERC1Q8IUD2 1116 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 MTMR14Q8NCE2 650 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 WDR66Q8TBY9 1149 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 DCPSQ96C86 337 aaKnown RBP19.99■□□□□ 0.79
SRM-204ENST00000475189 DENND2AQ9ULE3 1009 aa19.99■□□□□ 0.79
SRM-204ENST00000475189 TTF2Q9UNY4 1162 aaKnown RBP19.99■□□□□ 0.79
SRM-204ENST00000475189 DLGAP5Q15398 846 aa19.98■□□□□ 0.79
SRM-204ENST00000475189 CFAP100Q494V2 611 aa19.98■□□□□ 0.79
SRM-204ENST00000475189 GORABQ5T7V8 394 aa19.98■□□□□ 0.79
SRM-204ENST00000475189 ANGEL2Q5VTE6 544 aaKnown RBP19.98■□□□□ 0.79
SRM-204ENST00000475189 SUPT16HQ9Y5B9 1047 aaKnown RBP19.98■□□□□ 0.79
SRM-204ENST00000475189 PCDHAC2Q9Y5I4 1007 aa19.98■□□□□ 0.79
SRM-204ENST00000475189 RASGRF1Q13972 1273 aa19.97■□□□□ 0.79
SRM-204ENST00000475189 KRT26Q7Z3Y9 468 aa19.97■□□□□ 0.79
SRM-204ENST00000475189 RHPN1Q8TCX5 695 aa19.97■□□□□ 0.79
SRM-204ENST00000475189 EAF2Q96CJ1 260 aaPredicted RBP19.97■□□□□ 0.79
SRM-204ENST00000475189 DBNDD2Q9BQY9 259 aa19.97■□□□□ 0.79
SRM-204ENST00000475189 PITPNM2Q9BZ72 1349 aa19.97■□□□□ 0.79
SRM-204ENST00000475189 AKAP11Q9UKA4 1901 aa19.96■□□□□ 0.79
SRM-204ENST00000475189 ARID4AP29374 1257 aaPredicted RBP19.96■□□□□ 0.79
SRM-204ENST00000475189 DLK2Q6UY11 383 aa19.96■□□□□ 0.79
SRM-204ENST00000475189 CREBZFQ9NS37 354 aa19.96■□□□□ 0.79
SRM-204ENST00000475189 SERPINA10Q9UK55 444 aa19.96■□□□□ 0.79
SRM-204ENST00000475189 SUGT1Q9Y2Z0 365 aa19.96■□□□□ 0.79
SRM-204ENST00000475189 PCDHB15Q9Y5E8 787 aa19.96■□□□□ 0.79
SRM-204ENST00000475189 PDS5AQ29RF7 1337 aaKnown RBP19.96■□□□□ 0.79
SRM-204ENST00000475189 SALL1Q9NSC2 1324 aa19.96■□□□□ 0.79
SRM-204ENST00000475189 SPDYE2BA6NHP3 402 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 TMEM88BA6NKF7 163 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 ADM5C9JUS6 153 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 APBB1O00213 710 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 RAB11FIP3O75154 756 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 SPDYE6P0CI01 402 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 KIF1BPQ96EK5 621 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 PRMT6Q96LA8 375 aaPredicted RBP19.95■□□□□ 0.78
SRM-204ENST00000475189 CCDC8Q9H0W5 538 aaPredicted RBP19.95■□□□□ 0.78
SRM-204ENST00000475189 IL1RAPL2Q9NP60 686 aa19.95■□□□□ 0.78
SRM-204ENST00000475189 DBNLQ9UJU6 430 aaKnown RBP19.95■□□□□ 0.78
SRM-204ENST00000475189 UQCRFS1P1P0C7P4 283 aa19.94■□□□□ 0.78
SRM-204ENST00000475189 CRKP46108 304 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms