RNA–Protein interactions for RNA: ENST00000475049.5

SDHB-204, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 3

Gene SDHB, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-204ENST00000475049 M0R082 166 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 LILRB5O75023 590 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 ALBP02768 609 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 TCF3P15923 654 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 COL8A1P27658 744 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 CDC25BP30305 580 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 CABP4P57796 275 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 TAF1CQ15572 869 aaPredicted RBP6.72□□□□□ -1.33
SDHB-204ENST00000475049 MEI1Q5TIA1 1274 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 ZNF417Q8TAU3 575 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 BSNDQ8WZ55 320 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 ZNF587Q96SQ5 575 aaPredicted RBP6.72□□□□□ -1.33
SDHB-204ENST00000475049 RRAGCQ9HB90 399 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 ZFYVE1Q9HBF4 777 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 STARD13Q9Y3M8 1113 aa6.72□□□□□ -1.33
SDHB-204ENST00000475049 CDC27P30260 824 aa6.71□□□□□ -1.34
SDHB-204ENST00000475049 C8orf86Q6ZUL3 223 aa6.71□□□□□ -1.34
SDHB-204ENST00000475049 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
SDHB-204ENST00000475049 MUC3BQ9H195 1237 aa6.71□□□□□ -1.34
SDHB-204ENST00000475049 SH2B1Q9NRF2 756 aaPredicted RBP6.71□□□□□ -1.34
SDHB-204ENST00000475049 KRBA1A5PL33 1030 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 MSTNO14793 375 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 FBXO24O75426 580 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 ZNF76P36508 570 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 C9orf131Q5VYM1 1079 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 TPTE2Q6XPS3 522 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 ALYREFQ86V81 257 aaKnown RBP6.7□□□□□ -1.34
SDHB-204ENST00000475049 C3orf58Q8NDZ4 430 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 TTC9Q92623 222 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 SPOCK3Q9BQ16 436 aa6.7□□□□□ -1.34
SDHB-204ENST00000475049 GPN3Q9UHW5 284 aaPredicted RBP6.7□□□□□ -1.34
SDHB-204ENST00000475049 PROCP04070 461 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 ITPKAP23677 461 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 DGKGP49619 791 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 ZNF157P51786 506 aaPredicted RBP6.69□□□□□ -1.34
SDHB-204ENST00000475049 AFF1P51825 1210 aaKnown RBP6.69□□□□□ -1.34
SDHB-204ENST00000475049 PTPN12Q05209 780 aaKnown RBP6.69□□□□□ -1.34
SDHB-204ENST00000475049 CCDC85BQ15834 202 aaPredicted RBP6.69□□□□□ -1.34
SDHB-204ENST00000475049 C20orf204Q6ZNR8 217 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 WFDC8Q8IUA0 241 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 CACTIN-AS1Q8N1I8 211 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 RNF34Q969K3 372 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 ADAM19Q9H013 955 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 CLEC4MQ9H2X3 399 aaPredicted RBP6.69□□□□□ -1.34
SDHB-204ENST00000475049 ZNF576Q9H609 170 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 PPM1HQ9ULR3 514 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 USP31Q70CQ4 1352 aa6.69□□□□□ -1.34
SDHB-204ENST00000475049 GNB5O14775 395 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 ST13P50502 369 aaKnown RBP6.68□□□□□ -1.34
SDHB-204ENST00000475049 PCDH1Q08174 1060 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 IKBKEQ14164 716 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 LDLRAD1Q5T700 205 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 FAM117BQ6P1L5 589 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 ADAMTSL4Q6UY14 1074 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 SLC7A3Q8WY07 619 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 CEP44Q9C0F1 390 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 METTL5Q9NRN9 209 aaKnown RBP6.68□□□□□ -1.34
SDHB-204ENST00000475049 SOX13Q9UN79 622 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 PPME1Q9Y570 386 aa6.68□□□□□ -1.34
SDHB-204ENST00000475049 LINC01387J3KSC0 135 aa6.67□□□□□ -1.34
SDHB-204ENST00000475049 EPHA1P21709 976 aa6.67□□□□□ -1.34
SDHB-204ENST00000475049 HDLBPQ00341 1268 aaKnown RBP6.67□□□□□ -1.34
SDHB-204ENST00000475049 FANCCQ00597 558 aa6.67□□□□□ -1.34
SDHB-204ENST00000475049 RPS26P11Q5JNZ5 115 aaPredicted RBP6.67□□□□□ -1.34
SDHB-204ENST00000475049 TXNDC11Q6PKC3 985 aa6.67□□□□□ -1.34
SDHB-204ENST00000475049 HS2ST1Q7LGA3 356 aa6.67□□□□□ -1.34
SDHB-204ENST00000475049 VN1R5Q7Z5H4 357 aa6.67□□□□□ -1.34
SDHB-204ENST00000475049 GGT7Q9UJ14 662 aa6.67□□□□□ -1.34
SDHB-204ENST00000475049 H3BRJ5 948 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 PIK3R2O00459 728 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 ERCC5P28715 1186 aaPredicted RBP6.66□□□□□ -1.34
SDHB-204ENST00000475049 ARL4DP49703 201 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 PPP2R3AQ06190 1150 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 GRIK5Q16478 980 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 MAP3K11Q16584 847 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 MSL1Q68DK7 614 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 DMRTC2Q8IXT2 367 aaPredicted RBP6.66□□□□□ -1.34
SDHB-204ENST00000475049 DDX54Q8TDD1 881 aaKnown RBP6.66□□□□□ -1.34
SDHB-204ENST00000475049 SEC31BQ9NQW1 1179 aa6.66□□□□□ -1.34
SDHB-204ENST00000475049 ESRRAP11474 423 aaPredicted RBP6.65□□□□□ -1.34
SDHB-204ENST00000475049 FAAP100Q0VG06 881 aa6.65□□□□□ -1.34
SDHB-204ENST00000475049 TRAPPC3LQ5T215 181 aa6.65□□□□□ -1.34
SDHB-204ENST00000475049 SV2BQ7L1I2 683 aa6.65□□□□□ -1.34
SDHB-204ENST00000475049 NT5DC4Q86YG4 428 aa6.65□□□□□ -1.34
SDHB-204ENST00000475049 TMEM39AQ9NV64 488 aa6.65□□□□□ -1.34
SDHB-204ENST00000475049 F6X3S4 739 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 CELA3AP09093 270 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 BAG6P46379 1132 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 GSTM4Q03013 218 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 ZNF423Q2M1K9 1284 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 RELL1Q8IUW5 271 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 NECAB3Q96P71 396 aaPredicted RBP6.64□□□□□ -1.35
SDHB-204ENST00000475049 NOC4LQ9BVI4 516 aaKnown RBP6.64□□□□□ -1.35
SDHB-204ENST00000475049 CARD10Q9BWT7 1032 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 PRDM6Q9NQX0 595 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 IGSF5Q9NSI5 407 aa6.64□□□□□ -1.35
SDHB-204ENST00000475049 SOX1O00570 391 aaPredicted RBP6.63□□□□□ -1.35
SDHB-204ENST00000475049 B3GALT4O96024 378 aa6.63□□□□□ -1.35
SDHB-204ENST00000475049 LMNB1P20700 586 aa6.63□□□□□ -1.35
SDHB-204ENST00000475049 PIP4K2BP78356 416 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms