RNA–Protein interactions for RNA: ENST00000474941.1

SS18L2-203, Transcript of SS18 like 2, humanhuman

TSL 2

Gene SS18L2, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L2-203ENST00000474941 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.82
SS18L2-203ENST00000474941 CC2D2BQ6DHV5 1058 aa9.96□□□□□ -0.82
SS18L2-203ENST00000474941 DEPDC4Q8N2C3 294 aa9.96□□□□□ -0.82
SS18L2-203ENST00000474941 CCDC85AQ96PX6 553 aaPredicted RBP9.96□□□□□ -0.82
SS18L2-203ENST00000474941 CNTNAP4Q9C0A0 1308 aa9.96□□□□□ -0.82
SS18L2-203ENST00000474941 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.95□□□□□ -0.82
SS18L2-203ENST00000474941 PTCD1O75127 700 aaKnown RBP9.95□□□□□ -0.82
SS18L2-203ENST00000474941 ATG7O95352 703 aa9.95□□□□□ -0.82
SS18L2-203ENST00000474941 RASA1P20936 1047 aa9.95□□□□□ -0.82
SS18L2-203ENST00000474941 NNTQ13423 1086 aa9.95□□□□□ -0.82
SS18L2-203ENST00000474941 PPP1R26Q5T8A7 1209 aaPredicted RBP9.95□□□□□ -0.82
SS18L2-203ENST00000474941 MSL1Q68DK7 614 aa9.95□□□□□ -0.82
SS18L2-203ENST00000474941 PHACTR3Q96KR7 559 aa9.95□□□□□ -0.82
SS18L2-203ENST00000474941 CEMIPQ8WUJ3 1361 aa9.94□□□□□ -0.82
SS18L2-203ENST00000474941 FAM196BA6NMK8 535 aa9.94□□□□□ -0.82
SS18L2-203ENST00000474941 DDX10Q13206 875 aaKnown RBP9.94□□□□□ -0.82
SS18L2-203ENST00000474941 SMIM5Q71RC9 77 aa9.94□□□□□ -0.82
SS18L2-203ENST00000474941 LARGE2Q8N3Y3 721 aa9.94□□□□□ -0.82
SS18L2-203ENST00000474941 RTCBQ9Y3I0 505 aaKnown RBP9.94□□□□□ -0.82
SS18L2-203ENST00000474941 BRCA1P38398 1863 aaKnown RBP9.93□□□□□ -0.82
SS18L2-203ENST00000474941 LAMB4A4D0S4 1761 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 KDM3BQ7LBC6 1761 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 KIAA1551Q9HCM1 1747 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 TNFRSF10AO00220 468 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 ERVK-9P63128 1117 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 TEFQ10587 303 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 ELOAQ14241 798 aaKnown RBP9.93□□□□□ -0.82
SS18L2-203ENST00000474941 RALBP1Q15311 655 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 IL17REQ8NFR9 667 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 DNAAF2Q9NVR5 837 aaKnown RBP9.93□□□□□ -0.82
SS18L2-203ENST00000474941 TOR4AQ9NXH8 423 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
SS18L2-203ENST00000474941 AFDNP55196 1824 aaKnown RBP9.93□□□□□ -0.82
SS18L2-203ENST00000474941 N4BP2Q86UW6 1770 aaPredicted RBP9.93□□□□□ -0.82
SS18L2-203ENST00000474941 RPS6KA4O75676 772 aa9.92□□□□□ -0.82
SS18L2-203ENST00000474941 CRKLP46109 303 aaKnown RBP9.92□□□□□ -0.82
SS18L2-203ENST00000474941 SLC39A6Q13433 755 aa9.92□□□□□ -0.82
SS18L2-203ENST00000474941 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
SS18L2-203ENST00000474941 CYP2U1Q7Z449 544 aa9.92□□□□□ -0.82
SS18L2-203ENST00000474941 SCN7AQ01118 1682 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 GTF2IP78347 998 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 LAPTM4AQ15012 233 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 TSGA10IPQ3SY00 556 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 DNAJC10Q8IXB1 793 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 OGFOD1Q8N543 542 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 USTQ9Y2C2 406 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
SS18L2-203ENST00000474941 NEFMP07197 916 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 CYP19A1P11511 503 aaPredicted RBP9.9□□□□□ -0.82
SS18L2-203ENST00000474941 PDIA4P13667 645 aaKnown RBP9.9□□□□□ -0.82
SS18L2-203ENST00000474941 RFC4P35249 363 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 INTS5Q6P9B9 1019 aaKnown RBP9.9□□□□□ -0.82
SS18L2-203ENST00000474941 ZNF790Q6PG37 636 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 TTC5Q8N0Z6 440 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 NLGN2Q8NFZ4 835 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 FAM200AQ8TCP9 573 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 CYLDQ9NQC7 956 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 CCDC87Q9NVE4 849 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 CD2APQ9Y5K6 639 aa9.9□□□□□ -0.82
SS18L2-203ENST00000474941 HEG1Q9ULI3 1381 aa9.89□□□□□ -0.83
SS18L2-203ENST00000474941 ARFGEF1Q9Y6D6 1849 aa9.89□□□□□ -0.83
SS18L2-203ENST00000474941 MYBBP1AQ9BQG0 1328 aaKnown RBP9.89□□□□□ -0.83
SS18L2-203ENST00000474941 HTATSF1O43719 755 aaKnown RBP9.89□□□□□ -0.83
SS18L2-203ENST00000474941 NLGN1Q8N2Q7 840 aa9.89□□□□□ -0.83
SS18L2-203ENST00000474941 ZNF784Q8NCA9 323 aaPredicted RBP9.89□□□□□ -0.83
SS18L2-203ENST00000474941 RTF1Q92541 710 aaKnown RBP9.89□□□□□ -0.83
SS18L2-203ENST00000474941 NRXN2Q9P2S2 1712 aa9.89□□□□□ -0.83
SS18L2-203ENST00000474941 DLEC1Q9Y238 1755 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 SOS1Q07889 1333 aaPredicted RBP9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP42Q9H9J4 1324 aaKnown RBP9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L15C9J2P7 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L10C9JJH3 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L13C9JLJ4 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L12C9JPN9 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L11C9JVI0 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L21D6R901 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L18D6R9N7 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L22D6RA61 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L17D6RBQ6 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L19D6RCP7 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L20D6RJB6 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 J3QL48 77 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 NR3C2P08235 984 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 MMP10P09238 476 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 GYS1P13807 737 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 WDR4P57081 412 aaKnown RBP9.88□□□□□ -0.83
SS18L2-203ENST00000474941 USP17L24Q0WX57 530 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 MCM10Q7L590 875 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 ZNF496Q96IT1 587 aaPredicted RBP9.88□□□□□ -0.83
SS18L2-203ENST00000474941 PLEKHF1Q96S99 279 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 PNNQ9H307 717 aaKnown RBP9.88□□□□□ -0.83
SS18L2-203ENST00000474941 TMPRSS4Q9NRS4 437 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 NOVA2Q9UNW9 492 aaKnown RBP9.88□□□□□ -0.83
SS18L2-203ENST00000474941 COL15A1P39059 1388 aa9.88□□□□□ -0.83
SS18L2-203ENST00000474941 BTBD11A6QL63 1104 aa9.87□□□□□ -0.83
SS18L2-203ENST00000474941 BACH1O14867 736 aa9.87□□□□□ -0.83
SS18L2-203ENST00000474941 STARD3NLO95772 234 aa9.87□□□□□ -0.83
SS18L2-203ENST00000474941 GNRH1P01148 92 aa9.87□□□□□ -0.83
SS18L2-203ENST00000474941 SMPD1P17405 629 aa9.87□□□□□ -0.83
SS18L2-203ENST00000474941 PTK7Q13308 1070 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms