RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 IRS2Q9Y4H2 1338 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 HIP1O00291 1037 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 BBOX1O75936 387 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 NUDT7P0C024 238 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 ARID4AP29374 1257 aaPredicted RBP8.04□□□□□ -1.12
ATG4A-207ENST00000474825 ADORA1P30542 326 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 CCDC158Q5M9N0 1113 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 CASC1Q6TDU7 716 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 C15orf52Q6ZUT6 534 aaKnown RBP8.04□□□□□ -1.12
ATG4A-207ENST00000474825 DDX46Q7L014 1031 aaKnown RBP8.04□□□□□ -1.12
ATG4A-207ENST00000474825 TMC4Q7Z404 712 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 USP26Q9BXU7 913 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 ANKRD2Q9GZV1 360 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 BOLA2Q9H3K6 86 aa8.04□□□□□ -1.12
ATG4A-207ENST00000474825 UPF2Q9HAU5 1272 aaKnown RBP8.04□□□□□ -1.12
ATG4A-207ENST00000474825 TNRC6CQ9HCJ0 1690 aaKnown RBP8.04□□□□□ -1.12
ATG4A-207ENST00000474825 ZNF804BA4D1E1 1349 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 TRIM6-TRIM34B2RNG4 842 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 KIF3CO14782 793 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 SGSM2O43147 1006 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 REC8O95072 547 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 ZBTB7AO95365 584 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 MMP10P09238 476 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 UQCRFS1P1P0C7P4 283 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 SRGNP10124 158 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 CCDC102BQ68D86 513 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 ADGRD1Q6QNK2 874 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 KBTBD3Q8NAB2 608 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 RILPL2Q969X0 211 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 NEUROD6Q96NK8 337 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 C22orf23Q9BZE7 217 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 MTFR1LQ9H019 292 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 PODXL2Q9NZ53 605 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 PARP3Q9Y6F1 533 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 RAD50Q92878 1312 aa8.03□□□□□ -1.12
ATG4A-207ENST00000474825 SPEF2Q9C093 1822 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP8.02□□□□□ -1.13
ATG4A-207ENST00000474825 RIOK3O14730 519 aaKnown RBP8.02□□□□□ -1.13
ATG4A-207ENST00000474825 IGSF3O75054 1194 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 SLC34A2O95436 690 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 IFIT1P09914 478 aaKnown RBP8.02□□□□□ -1.13
ATG4A-207ENST00000474825 SLC5A1P13866 664 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 FBXO33Q7Z6M2 555 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 CCDC24Q8N4L8 307 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 RBM17Q96I25 401 aaKnown RBP8.02□□□□□ -1.13
ATG4A-207ENST00000474825 ZFP91Q96JP5 570 aaPredicted RBP8.02□□□□□ -1.13
ATG4A-207ENST00000474825 KIF2CQ99661 725 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 IL25Q9H293 177 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 LHX6Q9UPM6 363 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 LEMD3Q9Y2U8 911 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 ARAP2Q8WZ64 1704 aa8.02□□□□□ -1.13
ATG4A-207ENST00000474825 PDS5AQ29RF7 1337 aaKnown RBP8.02□□□□□ -1.13
ATG4A-207ENST00000474825 MED23Q9ULK4 1368 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 SEMA3EO15041 775 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 TAF5LO75529 589 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 MAP4K4O95819 1239 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-207ENST00000474825 NPR1P16066 1061 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 PDE6BP35913 854 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 MCAMP43121 646 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 PHKA1P46020 1223 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 MFAP1P55081 439 aaKnown RBP8.01□□□□□ -1.13
ATG4A-207ENST00000474825 SCARF1Q14162 830 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 TTC39AQ5SRH9 613 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 IL27Q8NEV9 243 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 HELBQ8NG08 1087 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-207ENST00000474825 RUFY2Q8WXA3 655 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 KCNB2Q92953 911 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 FAM84BQ96KN1 310 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-207ENST00000474825 PDGFDQ9GZP0 370 aaPredicted RBP8.01□□□□□ -1.13
ATG4A-207ENST00000474825 LSG1Q9H089 658 aaKnown RBP8.01□□□□□ -1.13
ATG4A-207ENST00000474825 PAG1Q9NWQ8 432 aa8.01□□□□□ -1.13
ATG4A-207ENST00000474825 SNAP23O00161 211 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 ZFYP08048 801 aaPredicted RBP8□□□□□ -1.13
ATG4A-207ENST00000474825 POLD1P28340 1107 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 ALDH1B1P30837 517 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 ZAP70P43403 619 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 ANAPC15P60006 121 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 TTF1Q15361 905 aaPredicted RBP8□□□□□ -1.13
ATG4A-207ENST00000474825 GORABQ5T7V8 394 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 STYK1Q6J9G0 422 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 SP8Q8IXZ3 490 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 RPGRQ92834 1020 aaKnown RBP8□□□□□ -1.13
ATG4A-207ENST00000474825 EDC3Q96F86 508 aaKnown RBP8□□□□□ -1.13
ATG4A-207ENST00000474825 MASTLQ96GX5 879 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 BCL11AQ9H165 835 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 HELLSQ9NRZ9 838 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 HMG20BQ9P0W2 317 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 ATP6V0A2Q9Y487 856 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 SRCAPQ6ZRS2 3230 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 ANKRD31Q8N7Z5 1873 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 XDHP47989 1333 aa8□□□□□ -1.13
ATG4A-207ENST00000474825 CASZ1Q86V15 1759 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 TK2O00142 265 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 GOLIM4O00461 696 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 ARHGAP33O14559 1287 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 NPHP1O15259 732 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 CYP2E1P05181 493 aaPredicted RBP7.99□□□□□ -1.13
ATG4A-207ENST00000474825 ATP2B4P23634 1241 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 YY1P25490 414 aa7.99□□□□□ -1.13
ATG4A-207ENST00000474825 ANP32AP39687 249 aaKnown RBP7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms