RNA–Protein interactions for RNA: ENST00000474742.1

HDAC9-222, Transcript of histone deacetylase 9, humanhuman

TSL 3

Gene HDAC9, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-222ENST00000474742 ACIN1Q9UKV3 1341 aaKnown RBP2.06□□□□□ -2.08
HDAC9-222ENST00000474742 H3BRJ5 948 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 TNFRSF10BO14763 440 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 OPLAHO14841 1288 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 FOXO3O43524 673 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 F13BP05160 661 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 BRD2P25440 801 aaKnown RBP2.05□□□□□ -2.08
HDAC9-222ENST00000474742 CPSF6Q16630 551 aaKnown RBP eCLIP2.05□□□□□ -2.08
HDAC9-222ENST00000474742 FBLN7Q53RD9 439 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 SGO2Q562F6 1265 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 COX20Q5RI15 118 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 OR13H1Q8NG92 308 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 FOXD4L4Q8WXT5 416 aaPredicted RBP2.05□□□□□ -2.08
HDAC9-222ENST00000474742 CCDC97Q96F63 343 aaPredicted RBP2.05□□□□□ -2.08
HDAC9-222ENST00000474742 PBX4Q9BYU1 374 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 RASSF4Q9H2L5 321 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 SEPT3Q9UH03 358 aa2.05□□□□□ -2.08
HDAC9-222ENST00000474742 ARID1BQ8NFD5 2236 aaPredicted RBP2.05□□□□□ -2.08
HDAC9-222ENST00000474742 ZBTB39O15060 712 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 ADAM11O75078 769 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 HOXD8P13378 290 aaPredicted RBP2.04□□□□□ -2.08
HDAC9-222ENST00000474742 ITGB5P18084 799 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 EPHA1P21709 976 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 CYP27A1Q02318 531 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 C19orf57Q0VDD7 668 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 NAA30Q147X3 362 aaPredicted RBP2.04□□□□□ -2.08
HDAC9-222ENST00000474742 MSMPQ1L6U9 139 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 SWI5Q1ZZU3 235 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 FBLIM1Q8WUP2 373 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 CLP1Q92989 425 aaKnown RBP2.04□□□□□ -2.08
HDAC9-222ENST00000474742 WNT8BQ93098 351 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 MYO19Q96H55 970 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 ARID3AQ99856 593 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 OSGEPQ9NPF4 335 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 ABI2Q9NYB9 513 aaPredicted RBP2.04□□□□□ -2.08
HDAC9-222ENST00000474742 CXXC1Q9P0U4 656 aaPredicted RBP2.04□□□□□ -2.08
HDAC9-222ENST00000474742 SLC5A6Q9Y289 635 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 KCNMB2Q9Y691 235 aa2.04□□□□□ -2.08
HDAC9-222ENST00000474742 PDE2AO00408 941 aaPredicted RBP2.03□□□□□ -2.08
HDAC9-222ENST00000474742 PRNPP04156 253 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 DRD2P14416 443 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 PCSK2P16519 638 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 RAB6AP20340 208 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 SSFA2P28290 1259 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 ECM1Q16610 540 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 COL13A1Q5TAT6 717 aaPredicted RBP2.03□□□□□ -2.08
HDAC9-222ENST00000474742 ARHGAP27Q6ZUM4 889 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 ETFBKMTQ8IXQ9 262 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 STK11IPQ8N1F8 1099 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 GPR152Q8TDT2 470 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 FAM168AQ92567 244 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 COL26A1Q96A83 441 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 POP1Q99575 1024 aaKnown RBP2.03□□□□□ -2.08
HDAC9-222ENST00000474742 MKNK1Q9BUB5 465 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 RC3H2Q9HBD1 1191 aaKnown RBP2.03□□□□□ -2.08
HDAC9-222ENST00000474742 RAD18Q9NS91 495 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 KANSL3Q9P2N6 904 aa2.03□□□□□ -2.08
HDAC9-222ENST00000474742 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.03□□□□□ -2.08
HDAC9-222ENST00000474742 MEGF11A6BM72 1044 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 FAM170BA6NMN3 283 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 PPP1R15AO75807 674 aaPredicted RBP2.02□□□□□ -2.09
HDAC9-222ENST00000474742 PAPLNO95428 1278 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 CYP2E1P05181 493 aaPredicted RBP2.02□□□□□ -2.09
HDAC9-222ENST00000474742 CES1P23141 567 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 ATP2B4P23634 1241 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 ZAP70P43403 619 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 RAP1GAPP47736 663 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 GSTM4Q03013 218 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 MTMR3Q13615 1198 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 IKBKEQ14164 716 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 MAP7Q14244 749 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 TRIP4Q15650 581 aaPredicted RBP2.02□□□□□ -2.09
HDAC9-222ENST00000474742 C16orf46Q6P387 395 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 CBLL1Q75N03 491 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 ZNF438Q7Z4V0 828 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 ZAR1Q86SH2 424 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 RETREG2Q8NC44 543 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 SMG8Q8ND04 991 aaKnown RBP2.02□□□□□ -2.09
HDAC9-222ENST00000474742 ZSCAN18Q8TBC5 510 aaPredicted RBP2.02□□□□□ -2.09
HDAC9-222ENST00000474742 TOX2Q96NM4 488 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 ADAM19Q9H013 955 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 PAK6Q9NQU5 681 aaPredicted RBP2.02□□□□□ -2.09
HDAC9-222ENST00000474742 PRKAG2Q9UGJ0 569 aa2.02□□□□□ -2.09
HDAC9-222ENST00000474742 ZC3H7BQ9UGR2 993 aaKnown RBP2.02□□□□□ -2.09
HDAC9-222ENST00000474742 LRRC10BA6NIK2 292 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 EIF4EBP3O60516 100 aaPredicted RBP2.01□□□□□ -2.09
HDAC9-222ENST00000474742 NFICP08651 508 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 ZNF865P0CJ78 1059 aaPredicted RBP2.01□□□□□ -2.09
HDAC9-222ENST00000474742 ADMP35318 185 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 SOX4Q06945 474 aaPredicted RBP2.01□□□□□ -2.09
HDAC9-222ENST00000474742 ZNF792Q3KQV3 632 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 AKAP4Q5JQC9 854 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 EXOSC6Q5RKV6 272 aaKnown RBP2.01□□□□□ -2.09
HDAC9-222ENST00000474742 HP1BP3Q5SSJ5 553 aaPredicted RBP2.01□□□□□ -2.09
HDAC9-222ENST00000474742 CDPF1Q6NVV7 123 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 LILRA6Q6PI73 481 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 SPOCD1Q6ZMY3 1216 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 ZNF765Q7L2R6 523 aa2.01□□□□□ -2.09
HDAC9-222ENST00000474742 DYMQ7RTS9 669 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms