RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 DNAAF4Q8WXU2 420 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 ZIC5Q96T25 663 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 EYA3Q99504 573 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 MXD3Q9BW11 206 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 WBP1LQ9NX94 342 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 GGA3Q9NZ52 723 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 PGAP2Q9UHJ9 254 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 TSKSQ9UJT2 592 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 SCAF8Q9UPN6 1271 aaKnown RBP7.58□□□□□ -1.2
CPSF7-210ENST00000474684 PDE4DIPQ5VU43 2346 aa7.58□□□□□ -1.2
CPSF7-210ENST00000474684 IRS2Q9Y4H2 1338 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 AK9Q5TCS8 1911 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 LBX1P52954 281 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 NEXNQ0ZGT2 675 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 EPHA10Q5JZY3 1008 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 SAPCD2Q86UD0 394 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 WDR63Q8IWG1 891 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 CDC5LQ99459 802 aaKnown RBP7.57□□□□□ -1.2
CPSF7-210ENST00000474684 PLA2G12BQ9BX93 195 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 MINPP1Q9UNW1 487 aa7.57□□□□□ -1.2
CPSF7-210ENST00000474684 MYO5AQ9Y4I1 1855 aaKnown RBP7.57□□□□□ -1.2
CPSF7-210ENST00000474684 SSC5DA1L4H1 1573 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 H7C1D1 291 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 VIL1P09327 827 aaKnown RBP7.56□□□□□ -1.2
CPSF7-210ENST00000474684 ITGA6P23229 1130 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 RPS12P25398 132 aaKnown RBP7.56□□□□□ -1.2
CPSF7-210ENST00000474684 CCT4P50991 539 aaKnown RBP7.56□□□□□ -1.2
CPSF7-210ENST00000474684 BEND3Q5T5X7 828 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 RSBN1LQ6PCB5 846 aaPredicted RBP7.56□□□□□ -1.2
CPSF7-210ENST00000474684 TMEM92Q6UXU6 159 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 USP48Q86UV5 1035 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 LINS1Q8NG48 757 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 DPF2Q92785 391 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 GMLQ99445 158 aa7.56□□□□□ -1.2
CPSF7-210ENST00000474684 ZC3H12CQ9C0D7 883 aaKnown RBP7.56□□□□□ -1.2
CPSF7-210ENST00000474684 ZSWIM8A7E2V4 1837 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 DOCK2Q92608 1830 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 MYH2Q9UKX2 1941 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 HSP90B1P14625 803 aaKnown RBP7.55□□□□□ -1.2
CPSF7-210ENST00000474684 ATP2B4P23634 1241 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 CTCFP49711 727 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-210ENST00000474684 ZNF280AP59817 542 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-210ENST00000474684 FOXO4P98177 505 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 ARSIQ5FYB1 569 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 DACT2Q5SW24 774 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 ANGEL2Q5VTE6 544 aaKnown RBP7.55□□□□□ -1.2
CPSF7-210ENST00000474684 CDC37L1Q7L3B6 337 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 KRT26Q7Z3Y9 468 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 EFCAB3Q8N7B9 438 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 ZC3H15Q8WU90 426 aaKnown RBP7.55□□□□□ -1.2
CPSF7-210ENST00000474684 AIDAQ96BJ3 306 aa7.55□□□□□ -1.2
CPSF7-210ENST00000474684 ZNF594Q96JF6 807 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-210ENST00000474684 BSDC1Q9NW68 430 aaPredicted RBP7.55□□□□□ -1.2
CPSF7-210ENST00000474684 AOX1Q06278 1338 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 CDK5RAP2Q96SN8 1893 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 TAF5LO75529 589 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 SASH1O94885 1247 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 CSF1RP07333 972 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 IGHMBP2P38935 993 aaKnown RBP7.54□□□□□ -1.2
CPSF7-210ENST00000474684 HUNKP57058 714 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 CHRNDQ07001 517 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 AGBL3Q8NEM8 1001 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 HELBQ8NG08 1087 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-210ENST00000474684 FBXW7Q969H0 707 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 CDCA5Q96FF9 252 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 KAZALD1Q96I82 304 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 SUCLG2Q96I99 432 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 MYH16Q9H6N6 1097 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 GBA2Q9HCG7 927 aaPredicted RBP7.54□□□□□ -1.2
CPSF7-210ENST00000474684 PRDM10Q9NQV6 1147 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 JAG2Q9Y219 1238 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 PCDHAC2Q9Y5I4 1007 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 PTPRFP10586 1907 aa7.54□□□□□ -1.2
CPSF7-210ENST00000474684 ZNF804BA4D1E1 1349 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 USP17L3A6NCW0 530 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 USP17L4A6NCW7 530 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 FAM155AB1AL88 458 aaPredicted RBP7.53□□□□□ -1.2
CPSF7-210ENST00000474684 GRM8O00222 908 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 USP17L8P0C7I0 530 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 ECE1P42892 770 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 SCARF1Q14162 830 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 NBPF9Q3BBW0 867 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 PRAMEF18Q5VWM3 479 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 MOB2Q70IA6 237 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 USP17L1Q7RTZ2 530 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 CERS5Q8N5B7 392 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 CHMP4AQ9BY43 222 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 MYOZ2Q9NPC6 264 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 CHMP3Q9Y3E7 222 aa7.53□□□□□ -1.2
CPSF7-210ENST00000474684 KIAA0100Q14667 2235 aaKnown RBP7.52□□□□□ -1.2
CPSF7-210ENST00000474684 COL1A1P02452 1464 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-210ENST00000474684 ANKRD18BA2A2Z9 1011 aa7.52□□□□□ -1.21
CPSF7-210ENST00000474684 NBPF7P0C2Y1 421 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-210ENST00000474684 MAP2K1Q02750 393 aaPredicted RBP7.52□□□□□ -1.21
CPSF7-210ENST00000474684 SLC4A10Q6U841 1118 aa7.52□□□□□ -1.21
CPSF7-210ENST00000474684 LMBR1LQ6UX01 489 aa7.52□□□□□ -1.21
CPSF7-210ENST00000474684 PODNQ7Z5L7 613 aa7.52□□□□□ -1.21
CPSF7-210ENST00000474684 KIAA0825Q8IV33 1275 aa7.52□□□□□ -1.21
CPSF7-210ENST00000474684 MRPL50Q8N5N7 158 aaKnown RBP7.52□□□□□ -1.21
CPSF7-210ENST00000474684 DCPSQ96C86 337 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 118 ms