RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 MTMR14Q8NCE2 650 aa17.1■□□□□ 0.33
RTN4R-206ENST00000474642 VEZTQ9HBM0 779 aa17.1■□□□□ 0.33
RTN4R-206ENST00000474642 USP2O75604 605 aaPredicted RBP17.09■□□□□ 0.33
RTN4R-206ENST00000474642 KLRK1P26718 216 aa17.09■□□□□ 0.33
RTN4R-206ENST00000474642 TAF1CQ15572 869 aaPredicted RBP17.09■□□□□ 0.33
RTN4R-206ENST00000474642 SLC17A8Q8NDX2 589 aa17.09■□□□□ 0.33
RTN4R-206ENST00000474642 ANKRD2Q9GZV1 360 aa17.09■□□□□ 0.33
RTN4R-206ENST00000474642 ELP3Q9H9T3 547 aa17.09■□□□□ 0.33
RTN4R-206ENST00000474642 ZFYVE28Q9HCC9 887 aa17.09■□□□□ 0.33
RTN4R-206ENST00000474642 MBIPQ9NS73 344 aa17.09■□□□□ 0.33
RTN4R-206ENST00000474642 MYH3P11055 1940 aa17.08■□□□□ 0.33
RTN4R-206ENST00000474642 F8W031 263 aaPredicted RBP17.08■□□□□ 0.32
RTN4R-206ENST00000474642 ELL2O00472 640 aaPredicted RBP17.08■□□□□ 0.32
RTN4R-206ENST00000474642 CFAP100Q494V2 611 aa17.08■□□□□ 0.32
RTN4R-206ENST00000474642 OPTNQ96CV9 577 aa17.08■□□□□ 0.32
RTN4R-206ENST00000474642 PCDHAC2Q9Y5I4 1007 aa17.08■□□□□ 0.32
RTN4R-206ENST00000474642 DPF3Q92784 378 aa17.07■□□□□ 0.32
RTN4R-206ENST00000474642 RUNDC1Q96C34 613 aa17.07■□□□□ 0.32
RTN4R-206ENST00000474642 MPHOSPH8Q99549 860 aa17.07■□□□□ 0.32
RTN4R-206ENST00000474642 CD209Q9NNX6 404 aa17.07■□□□□ 0.32
RTN4R-206ENST00000474642 MAP3K2Q9Y2U5 619 aa17.07■□□□□ 0.32
RTN4R-206ENST00000474642 SZT2Q5T011 3432 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 ECM29Q5VYK3 1845 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 SPDYE2BA6NHP3 402 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 SPDYE6P0CI01 402 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 RBM5P52756 815 aaKnown RBP eCLIP17.06■□□□□ 0.32
RTN4R-206ENST00000474642 RASA3Q14644 834 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 KIF22Q14807 665 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 CERS5Q8N5B7 392 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 SH3TC2Q8TF17 1288 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 MS4A4AQ96JQ5 239 aa17.06■□□□□ 0.32
RTN4R-206ENST00000474642 PRMT6Q96LA8 375 aaPredicted RBP17.06■□□□□ 0.32
RTN4R-206ENST00000474642 RBM27Q9P2N5 1060 aaKnown RBP17.06■□□□□ 0.32
RTN4R-206ENST00000474642 CCL15-CCL14A0A0B4J2E2 113 aa17.05■□□□□ 0.32
RTN4R-206ENST00000474642 WDHD1O75717 1129 aaPredicted RBP17.05■□□□□ 0.32
RTN4R-206ENST00000474642 GTF2A2P52657 109 aa17.05■□□□□ 0.32
RTN4R-206ENST00000474642 NEXNQ0ZGT2 675 aa17.05■□□□□ 0.32
RTN4R-206ENST00000474642 CCL15Q16663 113 aa17.05■□□□□ 0.32
RTN4R-206ENST00000474642 BRI3BPQ8WY22 251 aa17.05■□□□□ 0.32
RTN4R-206ENST00000474642 IGKV5-2P06315 115 aa17.04■□□□□ 0.32
RTN4R-206ENST00000474642 ITGA6P23229 1130 aa17.04■□□□□ 0.32
RTN4R-206ENST00000474642 CHRNDQ07001 517 aa17.03■□□□□ 0.32
RTN4R-206ENST00000474642 TNFAIP1Q13829 316 aa17.03■□□□□ 0.32
RTN4R-206ENST00000474642 CCDC30Q5VVM6 783 aa17.03■□□□□ 0.32
RTN4R-206ENST00000474642 KSR2Q6VAB6 950 aa17.03■□□□□ 0.32
RTN4R-206ENST00000474642 UBE3BQ7Z3V4 1068 aa17.03■□□□□ 0.32
RTN4R-206ENST00000474642 CHMP4AQ9BY43 222 aa17.03■□□□□ 0.32
RTN4R-206ENST00000474642 PI4KAP2A4QPH2 592 aa17.02■□□□□ 0.32
RTN4R-206ENST00000474642 ZEB1P37275 1124 aaPredicted RBP17.02■□□□□ 0.32
RTN4R-206ENST00000474642 WDR43Q15061 677 aaKnown RBP eCLIP17.02■□□□□ 0.32
RTN4R-206ENST00000474642 RALBP1Q15311 655 aa17.02■□□□□ 0.32
RTN4R-206ENST00000474642 FAM43AQ8N2R8 423 aa17.02■□□□□ 0.32
RTN4R-206ENST00000474642 PI4KAP1Q8N8J0 262 aa17.02■□□□□ 0.32
RTN4R-206ENST00000474642 CNKSR2Q8WXI2 1034 aa17.02■□□□□ 0.32
RTN4R-206ENST00000474642 AOX1Q06278 1338 aa17.01■□□□□ 0.31
RTN4R-206ENST00000474642 ZNF853P0CG23 659 aa17.01■□□□□ 0.31
RTN4R-206ENST00000474642 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
RTN4R-206ENST00000474642 CWF19L2Q2TBE0 894 aaKnown RBP17.01■□□□□ 0.31
RTN4R-206ENST00000474642 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.01■□□□□ 0.31
RTN4R-206ENST00000474642 ZNF804AQ7Z570 1209 aa17.01■□□□□ 0.31
RTN4R-206ENST00000474642 ARHGAP39Q9C0H5 1083 aa17.01■□□□□ 0.31
RTN4R-206ENST00000474642 CSADQ9Y600 493 aa17.01■□□□□ 0.31
RTN4R-206ENST00000474642 OTOFQ9HC10 1997 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 SNAP23O00161 211 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 GNRH1P01148 92 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 PRMT2P55345 433 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 GNAI1P63096 354 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 MAP3K9P80192 1104 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 LACTBP83111 547 aaPredicted RBP17■□□□□ 0.31
RTN4R-206ENST00000474642 HTATIP2Q9BUP3 242 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 IFT57Q9NWB7 429 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 ZNF70Q9UC06 446 aaPredicted RBP17■□□□□ 0.31
RTN4R-206ENST00000474642 JAG2Q9Y219 1238 aa17■□□□□ 0.31
RTN4R-206ENST00000474642 CUL9Q8IWT3 2517 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 NEURL1BA8MQ27 555 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 H7C1W4 665 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 TLR2O60603 784 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 TAF5LO75529 589 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 IL1R1P14778 569 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 VGLL4Q14135 290 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 MTFR1Q15390 333 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 C15orf52Q6ZUT6 534 aaKnown RBP16.99■□□□□ 0.31
RTN4R-206ENST00000474642 C8orf58Q8NAV2 365 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 HELBQ8NG08 1087 aaPredicted RBP16.99■□□□□ 0.31
RTN4R-206ENST00000474642 NKX2-3Q8TAU0 364 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 SHISA4Q96DD7 197 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 NR2E3Q9Y5X4 410 aa16.99■□□□□ 0.31
RTN4R-206ENST00000474642 ECM2O94769 699 aaPredicted RBP16.98■□□□□ 0.31
RTN4R-206ENST00000474642 CETPP11597 493 aa16.98■□□□□ 0.31
RTN4R-206ENST00000474642 CALD1Q05682 793 aaKnown RBP16.98■□□□□ 0.31
RTN4R-206ENST00000474642 SPDYE2Q495Y8 402 aa16.98■□□□□ 0.31
RTN4R-206ENST00000474642 PLA2G12BQ9BX93 195 aa16.98■□□□□ 0.31
RTN4R-206ENST00000474642 RANBP2P49792 3224 aaKnown RBP16.98■□□□□ 0.31
RTN4R-206ENST00000474642 ANKRD18BA2A2Z9 1011 aa16.97■□□□□ 0.31
RTN4R-206ENST00000474642 TCP10L2B9ZVM9 353 aa16.97■□□□□ 0.31
RTN4R-206ENST00000474642 TDRD3Q9H7E2 651 aaKnown RBP16.97■□□□□ 0.31
RTN4R-206ENST00000474642 IRS2Q9Y4H2 1338 aa16.96■□□□□ 0.31
RTN4R-206ENST00000474642 ZSWIM8A7E2V4 1837 aa16.96■□□□□ 0.31
RTN4R-206ENST00000474642 BTBD19C9JJ37 291 aa16.96■□□□□ 0.31
RTN4R-206ENST00000474642 CSF1RP07333 972 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms