RNA–Protein interactions for RNA: ENST00000474564.1

COL12A1-206, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 3

Gene COL12A1, Length 499 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-206ENST00000474564 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 NOL10Q9BSC4 688 aaKnown RBP12.5□□□□□ -0.41
COL12A1-206ENST00000474564 HMG20BQ9P0W2 317 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 ABCF2Q9UG63 623 aa12.5□□□□□ -0.41
COL12A1-206ENST00000474564 TAF1P21675 1872 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 COL11A2P13942 1736 aaPredicted RBP12.49□□□□□ -0.41
COL12A1-206ENST00000474564 GSPT1P15170 499 aaKnown RBP12.49□□□□□ -0.41
COL12A1-206ENST00000474564 IARSP41252 1262 aaKnown RBP12.49□□□□□ -0.41
COL12A1-206ENST00000474564 MCAMP43121 646 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 GSTO1P78417 241 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 RASGRF1Q13972 1273 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 GPR162Q16538 588 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 DOK7Q18PE1 504 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 OLFM4Q6UX06 510 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 RAI14Q9P0K7 980 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 WWC3Q9ULE0 1092 aa12.49□□□□□ -0.41
COL12A1-206ENST00000474564 IQSEC3Q9UPP2 1182 aaPredicted RBP12.49□□□□□ -0.41
COL12A1-206ENST00000474564 LTBP3Q9NS15 1303 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 GRIN3BO60391 1043 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 REC8O95072 547 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 LDHBP07195 334 aaKnown RBP12.48□□□□□ -0.41
COL12A1-206ENST00000474564 LDHCP07864 332 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 AOC3Q16853 763 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 TTLL5Q6EMB2 1281 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 SUGT1Q9Y2Z0 365 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 DLEC1Q9Y238 1755 aa12.48□□□□□ -0.41
COL12A1-206ENST00000474564 RFX7Q2KHR2 1363 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 MAST3O60307 1309 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 SLX4Q8IY92 1834 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 USP17L3A6NCW0 530 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 USP17L4A6NCW7 530 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 RNF113AO15541 343 aaKnown RBP12.47□□□□□ -0.41
COL12A1-206ENST00000474564 ECE2O60344 883 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 GTF2IP78347 998 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 TNIP1Q15025 636 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 SLC9C2Q5TAH2 1124 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 USP17L1Q7RTZ2 530 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 TXNRD3Q86VQ6 643 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 DZIP1Q86YF9 867 aaKnown RBP12.47□□□□□ -0.41
COL12A1-206ENST00000474564 CERS3Q8IU89 383 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 GPR101Q96P66 508 aaPredicted RBP12.47□□□□□ -0.41
COL12A1-206ENST00000474564 ZNRF3Q9ULT6 936 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 LRRC37AA6NMS7 1700 aa12.47□□□□□ -0.41
COL12A1-206ENST00000474564 SALL1Q9NSC2 1324 aa12.46□□□□□ -0.41
COL12A1-206ENST00000474564 WTIPA6NIX2 430 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-206ENST00000474564 CYP2E1P05181 493 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-206ENST00000474564 CHMLP26374 656 aa12.46□□□□□ -0.41
COL12A1-206ENST00000474564 KLRK1P26718 216 aa12.46□□□□□ -0.41
COL12A1-206ENST00000474564 EIF6P56537 245 aaKnown RBP12.46□□□□□ -0.41
COL12A1-206ENST00000474564 SCARF1Q14162 830 aa12.46□□□□□ -0.41
COL12A1-206ENST00000474564 STRIP1Q5VSL9 837 aa12.46□□□□□ -0.41
COL12A1-206ENST00000474564 DBNDD1Q9H9R9 158 aa12.46□□□□□ -0.41
COL12A1-206ENST00000474564 ZNF277Q9NRM2 450 aaPredicted RBP12.46□□□□□ -0.41
COL12A1-206ENST00000474564 HELLSQ9NRZ9 838 aa12.46□□□□□ -0.41
COL12A1-206ENST00000474564 FAM205AQ6ZU69 1335 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 MYO3BQ8WXR4 1341 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 RAD50Q92878 1312 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 BAG3O95817 575 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 LMNB1P20700 586 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 MCCP23508 829 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 ANP32AP39687 249 aaKnown RBP12.45□□□□□ -0.42
COL12A1-206ENST00000474564 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
COL12A1-206ENST00000474564 UBE3CQ15386 1083 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 MFSD14BQ5SR56 506 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 NAA16Q6N069 864 aaPredicted RBP12.45□□□□□ -0.42
COL12A1-206ENST00000474564 CWC27Q6UX04 472 aaKnown RBP12.45□□□□□ -0.42
COL12A1-206ENST00000474564 TBC1D9Q6ZT07 1266 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 ARAP2Q8WZ64 1704 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 COL4A1P02462 1669 aa12.45□□□□□ -0.42
COL12A1-206ENST00000474564 CACNA1SQ13698 1873 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 IRS2Q9Y4H2 1338 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 MMP14P50281 582 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 MCMDC2Q4G0Z9 681 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 PI16Q6UXB8 463 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 OGFOD1Q8N543 542 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 MAGEB6Q8N7X4 407 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 APPBP2Q92624 585 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 EDC3Q96F86 508 aaKnown RBP12.44□□□□□ -0.42
COL12A1-206ENST00000474564 DDRGK1Q96HY6 314 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 BACH2Q9BYV9 841 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 ANTXR1Q9H6X2 564 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 HDAC9Q9UKV0 1011 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 RBM19Q9Y4C8 960 aaKnown RBP12.44□□□□□ -0.42
COL12A1-206ENST00000474564 NDUFB9Q9Y6M9 179 aa12.44□□□□□ -0.42
COL12A1-206ENST00000474564 CYP7A1P22680 504 aa12.43□□□□□ -0.42
COL12A1-206ENST00000474564 AIDAQ96BJ3 306 aa12.43□□□□□ -0.42
COL12A1-206ENST00000474564 ESYT1Q9BSJ8 1104 aa12.43□□□□□ -0.42
COL12A1-206ENST00000474564 PIH1D3Q9NQM4 214 aaKnown RBP12.43□□□□□ -0.42
COL12A1-206ENST00000474564 EPB41L2O43491 1005 aaKnown RBP12.42□□□□□ -0.42
COL12A1-206ENST00000474564 PDE6AP16499 860 aa12.42□□□□□ -0.42
COL12A1-206ENST00000474564 PLCG2P16885 1265 aa12.42□□□□□ -0.42
COL12A1-206ENST00000474564 GNAT2P19087 354 aa12.42□□□□□ -0.42
COL12A1-206ENST00000474564 ADD2P35612 726 aa12.42□□□□□ -0.42
COL12A1-206ENST00000474564 NMIQ13287 307 aaPredicted RBP12.42□□□□□ -0.42
COL12A1-206ENST00000474564 ZMYM1Q5SVZ6 1142 aa12.42□□□□□ -0.42
COL12A1-206ENST00000474564 CIAPIN1Q6FI81 312 aa12.42□□□□□ -0.42
COL12A1-206ENST00000474564 ANO2Q9NQ90 1003 aa12.42□□□□□ -0.42
COL12A1-206ENST00000474564 ZNF532Q9HCE3 1301 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 MAGEB6P1A0A0J9YX57 407 aa12.41□□□□□ -0.42
COL12A1-206ENST00000474564 NFKBIEO00221 500 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms