RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 ATP7AQ04656 1500 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 FGD6Q6ZV73 1430 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 KIAA1107Q9UPP5 1409 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 AFF2P51816 1311 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 RAD50Q92878 1312 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 ZNF500O60304 480 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-209ENST00000474157 ERCC3P19447 782 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 ZSCAN29Q8IWY8 852 aaPredicted RBP8.91□□□□□ -0.98
GPNMB-209ENST00000474157 ZIC5Q96T25 663 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 FEZ1Q99689 392 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 DYRK1BQ9Y463 629 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 CEP83Q9Y592 693 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 STRCP1A6NGW2 1772 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 LRP6O75581 1613 aa8.91□□□□□ -0.98
GPNMB-209ENST00000474157 MSH6P52701 1360 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 NRDCO43847 1150 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 FRAT2O75474 233 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-209ENST00000474157 MSNP26038 577 aaKnown RBP8.9□□□□□ -0.98
GPNMB-209ENST00000474157 HNRNPUQ00839 825 aaKnown RBP eCLIP8.9□□□□□ -0.98
GPNMB-209ENST00000474157 CCDC173Q0VFZ6 552 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 LRRC69Q6ZNQ3 347 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 OTUD6BQ8N6M0 293 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 EDEM1Q92611 657 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 GAS2L1Q99501 681 aaPredicted RBP8.9□□□□□ -0.98
GPNMB-209ENST00000474157 RBCK1Q9BYM8 510 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 RUBCNLQ9H714 662 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 NEUROD4Q9HD90 331 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 ITSN2Q9NZM3 1697 aa8.9□□□□□ -0.98
GPNMB-209ENST00000474157 SCAF11Q99590 1463 aaKnown RBP8.89□□□□□ -0.99
GPNMB-209ENST00000474157 SENP3-EIF4A1A0A087X0R7 540 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 A0A1W2PNR3 127 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 MICAL2O94851 1124 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 HMGN5P82970 282 aaKnown RBP8.89□□□□□ -0.99
GPNMB-209ENST00000474157 DNM1Q05193 864 aaKnown RBP8.89□□□□□ -0.99
GPNMB-209ENST00000474157 SETDB1Q15047 1291 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 NBPF6Q5VWK0 638 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 IER5Q5VY09 327 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 TMED8Q6PL24 325 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-209ENST00000474157 SASS6Q6UVJ0 657 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 NBPF5PQ86XG9 351 aaPredicted RBP8.89□□□□□ -0.99
GPNMB-209ENST00000474157 NPAS4Q8IUM7 802 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 RGL4Q8IZJ4 473 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 PDCL2Q8N4E4 241 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 NBPF4Q96M43 638 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 NCAPGQ9BPX3 1015 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 ANKIB1Q9P2G1 1089 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 POLIQ9UNA4 740 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 SH3BP1Q9Y3L3 701 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 SYCP2Q9BX26 1530 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 PLEKHH2Q8IVE3 1493 aa8.89□□□□□ -0.99
GPNMB-209ENST00000474157 SMG6Q86US8 1419 aaKnown RBP8.88□□□□□ -0.99
GPNMB-209ENST00000474157 CDC42BPBQ9Y5S2 1711 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
GPNMB-209ENST00000474157 ROBO1Q9Y6N7 1651 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 CFAP65Q6ZU64 1925 aaKnown RBP8.88□□□□□ -0.99
GPNMB-209ENST00000474157 SETBP1Q9Y6X0 1596 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 F11P03951 625 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 CCDC172P0C7W6 258 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 IDH3AP50213 366 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 TMC7Q7Z402 723 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 RPAINQ86UA6 219 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 CERS3Q8IU89 383 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 TMC1Q8TDI8 760 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 GPR152Q8TDT2 470 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 ZNF428Q96B54 188 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 PPP1R9BQ96SB3 815 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 CRISPLD1Q9H336 500 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 SMC4Q9NTJ3 1288 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 DMGDHQ9UI17 866 aaKnown RBP8.88□□□□□ -0.99
GPNMB-209ENST00000474157 AMOTL2Q9Y2J4 779 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 GJA3Q9Y6H8 435 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 RGS12O14924 1447 aa8.88□□□□□ -0.99
GPNMB-209ENST00000474157 PREX2Q70Z35 1606 aa8.87□□□□□ -0.99
GPNMB-209ENST00000474157 MZF1P28698 734 aaPredicted RBP8.87□□□□□ -0.99
GPNMB-209ENST00000474157 PGBD3Q8N328 593 aa8.87□□□□□ -0.99
GPNMB-209ENST00000474157 SENP2Q9HC62 589 aa8.87□□□□□ -0.99
GPNMB-209ENST00000474157 CGNQ9P2M7 1197 aaKnown RBP8.87□□□□□ -0.99
GPNMB-209ENST00000474157 KNSTRNQ9Y448 316 aa8.87□□□□□ -0.99
GPNMB-209ENST00000474157 PDGFAP04085 211 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 NEFHP12036 1026 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 KCNJ4P48050 445 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 RBM25P49756 843 aaKnown RBP8.86□□□□□ -0.99
GPNMB-209ENST00000474157 PTSQ03393 145 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 BTLAQ7Z6A9 289 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 MKL1Q969V6 931 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 FAM210AQ96ND0 272 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 CITED4Q96RK1 184 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 SLC26A8Q96RN1 970 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 PRDM16Q9HAZ2 1276 aa8.86□□□□□ -0.99
GPNMB-209ENST00000474157 FYCO1Q9BQS8 1478 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 UQCRHLA0A096LP55 91 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 GOLIM4O00461 696 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 OPLAHO14841 1288 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 UQCRHP07919 91 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 ARSDP51689 593 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 RIPOR1Q6ZS17 1223 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 KIFC2Q96AC6 838 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 NUDT16Q96DE0 195 aaKnown RBP8.85□□□□□ -0.99
GPNMB-209ENST00000474157 TRIM47Q96LD4 638 aa8.85□□□□□ -0.99
GPNMB-209ENST00000474157 FAM129BQ96TA1 746 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms