RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 UQCRFS1P1P0C7P4 283 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 RXRBP28702 533 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 SLC27A3Q5K4L6 730 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 TXNRD3Q86VQ6 643 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 NEK1Q96PY6 1258 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 GZF1Q9H116 711 aaPredicted RBP7.43□□□□□ -1.22
CLK1-210ENST00000473565 DENND2AQ9ULE3 1009 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 SERPINB2P05120 415 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 TOB2Q14106 344 aaPredicted RBP7.43□□□□□ -1.22
CLK1-210ENST00000473565 ZNF512BQ96KM6 892 aaPredicted RBP7.43□□□□□ -1.22
CLK1-210ENST00000473565 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.43□□□□□ -1.223e-11■□□□□ 10.1
CLK1-210ENST00000473565 ABCF2Q9UG63 623 aa7.43□□□□□ -1.22
CLK1-210ENST00000473565 PPFIA3O75145 1194 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 FGAP02671 866 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 ZFYP08048 801 aaPredicted RBP7.42□□□□□ -1.22
CLK1-210ENST00000473565 MSL1Q68DK7 614 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 MIGA1Q8NAN2 632 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 NKX2-3Q8TAU0 364 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 DSCC1Q9BVC3 393 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 GPHNQ9NQX3 736 aaPredicted RBP7.42□□□□□ -1.22
CLK1-210ENST00000473565 TCRBV5S4A2TA0A5A2 114 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 E7EWF7 191 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 BAG4O95429 457 aaKnown RBP7.42□□□□□ -1.22
CLK1-210ENST00000473565 APPP05067 770 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 PSMA5P28066 241 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 Q6ZUG5 572 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 VPS37DQ86XT2 251 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 FAM84BQ96KN1 310 aaPredicted RBP7.42□□□□□ -1.22
CLK1-210ENST00000473565 ARMT1Q9H993 441 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 PRKAB2O43741 272 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 MBD4O95243 580 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 ADRA2BP18089 450 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 TTF1Q15361 905 aaPredicted RBP7.42□□□□□ -1.22
CLK1-210ENST00000473565 ADGRA1Q86SQ6 560 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 COL23A1Q86Y22 540 aaPredicted RBP7.42□□□□□ -1.22
CLK1-210ENST00000473565 STK11IPQ8N1F8 1099 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 INCENPQ9NQS7 918 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 LRP2BPQ9P2M1 347 aa7.42□□□□□ -1.22
CLK1-210ENST00000473565 RGL2O15211 777 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 NUCB2P80303 420 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 CHAF1AQ13111 956 aaPredicted RBP7.41□□□□□ -1.22
CLK1-210ENST00000473565 TSGA10IPQ3SY00 556 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 MCTP1Q6DN14 999 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 BRF1Q92994 677 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 CWC22Q9HCG8 908 aaKnown RBP7.41□□□□□ -1.22
CLK1-210ENST00000473565 FGD1P98174 961 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 MAP3K12Q12852 859 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 UBE4AQ14139 1066 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 LRRFIP1Q32MZ4 808 aaKnown RBP7.41□□□□□ -1.22
CLK1-210ENST00000473565 RAB11FIP4Q86YS3 637 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 LCORLQ8N3X6 602 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 AIDAQ96BJ3 306 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 INTS4Q96HW7 963 aaKnown RBP7.41□□□□□ -1.22
CLK1-210ENST00000473565 RAI14Q9P0K7 980 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 ANKIB1Q9P2G1 1089 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 NAP1L2Q9ULW6 460 aaPredicted RBP7.41□□□□□ -1.22
CLK1-210ENST00000473565 ZNF804BA4D1E1 1349 aa7.41□□□□□ -1.22
CLK1-210ENST00000473565 DOCK2Q92608 1830 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 SMIM22K7EJ46 135 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 POLRMTO00411 1230 aaKnown RBP7.4□□□□□ -1.22
CLK1-210ENST00000473565 UBE3CQ15386 1083 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 ZSCAN25Q6NSZ9 544 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 RPGRQ92834 1020 aaKnown RBP7.4□□□□□ -1.22
CLK1-210ENST00000473565 GBP4Q96PP9 640 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 NBPF3Q9H094 633 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 SMC3Q9UQE7 1217 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 TRAK2O60296 914 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 GJB2P29033 226 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 APOBRQ0VD83 1088 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 KRT32Q14532 448 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 TPRNQ4KMQ1 711 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 CAVIN4Q5BKX8 364 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 OLFM4Q6UX06 510 aa7.4□□□□□ -1.22
CLK1-210ENST00000473565 STRBPQ96SI9 672 aaKnown RBP7.4□□□□□ -1.22
CLK1-210ENST00000473565 EPB41L4AQ9HCS5 686 aaPredicted RBP7.4□□□□□ -1.22
CLK1-210ENST00000473565 BRD1O95696 1058 aa7.4□□□□□ -1.23
CLK1-210ENST00000473565 CYP7A1P22680 504 aa7.4□□□□□ -1.23
CLK1-210ENST00000473565 ST5P78524 1137 aa7.4□□□□□ -1.23
CLK1-210ENST00000473565 GRAPQ13588 217 aa7.4□□□□□ -1.23
CLK1-210ENST00000473565 IMMTQ16891 758 aaKnown RBP7.4□□□□□ -1.23
CLK1-210ENST00000473565 TBC1D10CQ8IV04 446 aa7.4□□□□□ -1.23
CLK1-210ENST00000473565 GRAPLQ8TC17 118 aaPredicted RBP7.4□□□□□ -1.23
CLK1-210ENST00000473565 ZNF384Q8TF68 577 aa7.4□□□□□ -1.23
CLK1-210ENST00000473565 AKT1S1Q96B36 256 aa7.4□□□□□ -1.23
CLK1-210ENST00000473565 JAK2O60674 1132 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 FOSBP53539 338 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 EN1Q05925 392 aaPredicted RBP7.39□□□□□ -1.23
CLK1-210ENST00000473565 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
CLK1-210ENST00000473565 FBXO33Q7Z6M2 555 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 GDPD2Q9HCC8 539 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 ANO8Q9HCE9 1232 aaPredicted RBP7.39□□□□□ -1.23
CLK1-210ENST00000473565 NSFL1CQ9UNZ2 370 aaKnown RBP7.39□□□□□ -1.23
CLK1-210ENST00000473565 TCHHQ07283 1943 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 ZNF213O14771 459 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 PLSCR1O15162 318 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 SYT1P21579 422 aa7.39□□□□□ -1.23
CLK1-210ENST00000473565 HIBADHP31937 336 aaKnown RBP7.39□□□□□ -1.23
CLK1-210ENST00000473565 DYNLL1P63167 89 aaKnown RBP7.39□□□□□ -1.23
CLK1-210ENST00000473565 CCT2P78371 535 aaKnown RBP7.39□□□□□ -1.23
CLK1-210ENST00000473565 GPSM2P81274 684 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms