RNA–Protein interactions for RNA: ENST00000472844.1

NUP35-208, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 514 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-208ENST00000472844 CDHR1Q96JP9 859 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.1□□□□□ -1.11
NUP35-208ENST00000472844 CSRNP2Q9H175 543 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 USP25Q9UHP3 1055 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 PCDHGC3Q9UN70 934 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 LEMD3Q9Y2U8 911 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 V9GY48 417 aaPredicted RBP8.1□□□□□ -1.11
NUP35-208ENST00000472844 FGD5Q6ZNL6 1462 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 ADAMTSL3P82987 1691 aa8.1□□□□□ -1.11
NUP35-208ENST00000472844 TOP2AP11388 1531 aaKnown RBP8.09□□□□□ -1.11
NUP35-208ENST00000472844 RCCD1A6NED2 376 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 RASSF10A6NK89 507 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 SFI1A8K8P3 1242 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 SMAPO00193 183 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 IGHA2P01877 340 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 HTR3AP46098 478 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 NEK2P51955 445 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 FKBP5Q13451 457 aaPredicted RBP8.09□□□□□ -1.11
NUP35-208ENST00000472844 IL31Q6EBC2 164 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 LCA5Q86VQ0 697 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 TCEAL8Q8IYN2 117 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 SYNPOQ8N3V7 929 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 TTC13Q8NBP0 860 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 FBF1Q8TES7 1133 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 ATRIPQ8WXE1 791 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 COL26A1Q96A83 441 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 RIC8AQ9NPQ8 531 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 KIAA1024Q9UPX6 916 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 GJA3Q9Y6H8 435 aa8.09□□□□□ -1.11
NUP35-208ENST00000472844 SRCAPQ6ZRS2 3230 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 KIF3CO14782 793 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 ZBTB7BO15156 539 aaPredicted RBP8.08□□□□□ -1.12
NUP35-208ENST00000472844 HNRNPCP07910 306 aaKnown RBP eCLIP8.08□□□□□ -1.12
NUP35-208ENST00000472844 EPB42P16452 691 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 EIF4BP23588 611 aaKnown RBP8.08□□□□□ -1.12
NUP35-208ENST00000472844 STAT3P40763 770 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 GUCY2FP51841 1108 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 NEK3P51956 506 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 NUCB1Q02818 461 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 ARMC3Q5W041 872 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 TSHZ3Q63HK5 1081 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 PODNQ7Z5L7 613 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 MORC1Q86VD1 984 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 RASSF3Q86WH2 238 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 SKAP1Q86WV1 359 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 RPGRQ92834 1020 aaKnown RBP8.08□□□□□ -1.12
NUP35-208ENST00000472844 TRMT2BQ96GJ1 504 aaKnown RBP8.08□□□□□ -1.12
NUP35-208ENST00000472844 NIF3L1Q9GZT8 377 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 CAAP1Q9H8G2 361 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 ZSWIM6Q9HCJ5 1215 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 MSRB2Q9Y3D2 182 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 GLI2P10070 1586 aa8.08□□□□□ -1.12
NUP35-208ENST00000472844 MED1Q15648 1581 aaPredicted RBP8.08□□□□□ -1.12
NUP35-208ENST00000472844 E2F8A0AVK6 867 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 FAM170AA1A519 330 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 VAMP4O75379 141 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 LGR5O75473 907 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 SOX5P35711 763 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 C2orf27AQ580R0 203 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 SPECC1Q5M775 1068 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 FAM102BQ5T8I3 360 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 CCDC102BQ68D86 513 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 NXNQ6DKJ4 435 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 ALKBH2Q6NS38 261 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 CFAP161Q6P656 301 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 UBE2Q1Q7Z7E8 422 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 THNSL2Q86YJ6 484 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 CLASRPQ8N2M8 674 aaKnown RBP8.07□□□□□ -1.12
NUP35-208ENST00000472844 PHTF2Q8N3S3 785 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 PGBD4Q96DM1 585 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 PAWRQ96IZ0 340 aaKnown RBP8.07□□□□□ -1.12
NUP35-208ENST00000472844 SERINC2Q96SA4 455 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 CDH19Q9H159 772 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 PRKAG3Q9UGI9 489 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 NOB1Q9ULX3 412 aaKnown RBP8.07□□□□□ -1.12
NUP35-208ENST00000472844 USP31Q70CQ4 1352 aa8.07□□□□□ -1.12
NUP35-208ENST00000472844 ASMTLO95671 621 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 TRIM27P14373 513 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 WEE1P30291 646 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 DDX10Q13206 875 aaKnown RBP8.06□□□□□ -1.12
NUP35-208ENST00000472844 BIRC3Q13489 604 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 WDR45BQ5MNZ6 344 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 WWC2Q6AWC2 1192 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 NBPF5PQ86XG9 351 aaPredicted RBP8.06□□□□□ -1.12
NUP35-208ENST00000472844 KIAA0825Q8IV33 1275 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 EMID1Q96A84 441 aaPredicted RBP8.06□□□□□ -1.12
NUP35-208ENST00000472844 STRN4Q9NRL3 753 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 MAP3K4Q9Y6R4 1608 aa8.06□□□□□ -1.12
NUP35-208ENST00000472844 WASHC2AQ641Q2 1341 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 MADDQ8WXG6 1647 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 WASLO00401 505 aaPredicted RBP8.05□□□□□ -1.12
NUP35-208ENST00000472844 FZD6O60353 706 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 PPFIA3O75145 1194 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 MYCLP1P12525 358 aaPredicted RBP8.05□□□□□ -1.12
NUP35-208ENST00000472844 PIN1Q13526 163 aaPredicted RBP8.05□□□□□ -1.12
NUP35-208ENST00000472844 JAKMIP3Q5VZ66 844 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 TYW1BQ6NUM6 668 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 GPR153Q6NV75 609 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 TRAF7Q6Q0C0 670 aa8.05□□□□□ -1.12
NUP35-208ENST00000472844 RDH13Q8NBN7 331 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms